RNA–Protein interactions for RNA: ENST00000527103.1

PITPNM1-208, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 4

Gene PITPNM1, Length 308 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-208ENST00000527103 NISCHQ9Y2I1 1504 aa54■■■■■ 6.24
PITPNM1-208ENST00000527103 CCDC180Q9P1Z9 1646 aa47.89■■■■■ 5.26
PITPNM1-208ENST00000527103 ABCC9O60706 1549 aa47.05■■■■■ 5.12
PITPNM1-208ENST00000527103 DCAF8L2P0C7V8 631 aa45.34■■■■■ 4.85
PITPNM1-208ENST00000527103 RB1CC1Q8TDY2 1594 aa45.17■■■■■ 4.82
PITPNM1-208ENST00000527103 NACADO15069 1562 aa45.12■■■■■ 4.81
PITPNM1-208ENST00000527103 ZCCHC6Q5VYS8 1495 aaKnown RBP44.93■■■■■ 4.78
PITPNM1-208ENST00000527103 MYO15BQ96JP2 1530 aa44.83■■■■■ 4.77
PITPNM1-208ENST00000527103 DCAF1Q9Y4B6 1507 aa44.64■■■■■ 4.74
PITPNM1-208ENST00000527103 PABPN1Q86U42 306 aaKnown RBP eCLIP44.07■■■■■ 4.65
PITPNM1-208ENST00000527103 UNC13AQ9UPW8 1703 aa44.04■■■■■ 4.64
PITPNM1-208ENST00000527103 BICRAQ9NZM4 1560 aa43.8■■■■■ 4.6
PITPNM1-208ENST00000527103 SCRIBQ14160 1630 aa43.77■■■■■ 4.6
PITPNM1-208ENST00000527103 DNAJC5BQ9UF47 199 aa43.35■■■■■ 4.53
PITPNM1-208ENST00000527103 SHROOM4Q9ULL8 1493 aa43.29■■■■■ 4.52
PITPNM1-208ENST00000527103 EIF4G1Q04637 1599 aaKnown RBP42.65■■■■■ 4.42
PITPNM1-208ENST00000527103 CC2D2AQ9P2K1 1620 aa42.49■■■■■ 4.39
PITPNM1-208ENST00000527103 CECR2Q9BXF3 1484 aa42.27■■■■■ 4.36
PITPNM1-208ENST00000527103 SMARCA4P51532 1647 aa41.85■■■■■ 4.29
PITPNM1-208ENST00000527103 BAZ1AQ9NRL2 1556 aaPredicted RBP41.82■■■■■ 4.29
PITPNM1-208ENST00000527103 ATAD2BQ9ULI0 1458 aa41.71■■■■■ 4.27
PITPNM1-208ENST00000527103 NCAPD3P42695 1498 aa41.7■■■■■ 4.27
PITPNM1-208ENST00000527103 MROH2BQ7Z745 1585 aa41.63■■■■■ 4.26
PITPNM1-208ENST00000527103 SMARCA2P51531 1590 aa41.6■■■■■ 4.25
PITPNM1-208ENST00000527103 PEG3Q9GZU2 1588 aa41.43■■■■■ 4.22
PITPNM1-208ENST00000527103 HMGXB3Q12766 1538 aa41.39■■■■■ 4.22
PITPNM1-208ENST00000527103 BAZ1BQ9UIG0 1483 aaKnown RBP41.34■■■■■ 4.21
PITPNM1-208ENST00000527103 RSF1Q96T23 1441 aaPredicted RBP41.18■■■■■ 4.18
PITPNM1-208ENST00000527103 WIZO95785 1651 aa41.14■■■■■ 4.18
PITPNM1-208ENST00000527103 NESP48681 1621 aa40.7■■■■■ 4.11
PITPNM1-208ENST00000527103 TOP2AP11388 1531 aaKnown RBP40.69■■■■■ 4.1
PITPNM1-208ENST00000527103 ERCC6Q03468 1493 aa40.54■■■■■ 4.08
PITPNM1-208ENST00000527103 LAMC3Q9Y6N6 1575 aa40.52■■■■■ 4.08
PITPNM1-208ENST00000527103 CADPSQ9ULU8 1353 aa40.51■■■■■ 4.08
PITPNM1-208ENST00000527103 PDS5BQ9NTI5 1447 aa40.34■■■■■ 4.05
PITPNM1-208ENST00000527103 CCDC88BA6NC98 1476 aa40.3■■■■■ 4.04
PITPNM1-208ENST00000527103 SUPT5HO00267 1087 aaKnown RBP40.25■■■■■ 4.03
PITPNM1-208ENST00000527103 CFTRP13569 1480 aa40.22■■■■■ 4.03
PITPNM1-208ENST00000527103 KIF21AQ7Z4S6 1674 aa40.11■■■■■ 4.01
PITPNM1-208ENST00000527103 CUX2O14529 1486 aa40.07■■■■■ 4.01
PITPNM1-208ENST00000527103 FANCD2Q9BXW9 1451 aa40■■■■□ 3.99
PITPNM1-208ENST00000527103 THOC2Q8NI27 1593 aaKnown RBP39.97■■■■□ 3.99
PITPNM1-208ENST00000527103 CEP164Q9UPV0 1460 aa39.93■■■■□ 3.98
PITPNM1-208ENST00000527103 MRC2Q9UBG0 1479 aa39.88■■■■□ 3.97
PITPNM1-208ENST00000527103 PRDM2Q13029 1718 aa39.72■■■■□ 3.95
PITPNM1-208ENST00000527103 WDR62O43379 1518 aa39.71■■■■□ 3.95
PITPNM1-208ENST00000527103 URB2Q14146 1524 aaKnown RBP39.59■■■■□ 3.93
PITPNM1-208ENST00000527103 DNAJC5Q9H3Z4 198 aa39.54■■■■□ 3.92
PITPNM1-208ENST00000527103 ABCC8Q09428 1581 aa39.36■■■■□ 3.89
PITPNM1-208ENST00000527103 TOPBP1Q92547 1522 aa39.35■■■■□ 3.89
PITPNM1-208ENST00000527103 DNMBPQ6XZF7 1577 aa39.25■■■■□ 3.87
PITPNM1-208ENST00000527103 IFT140Q96RY7 1462 aa39.11■■■■□ 3.85
PITPNM1-208ENST00000527103 CUX1P39880 1505 aa39.04■■■■□ 3.84
PITPNM1-208ENST00000527103 POLA1P09884 1462 aaPredicted RBP39.01■■■■□ 3.84
PITPNM1-208ENST00000527103 ZNF608Q9ULD9 1512 aaPredicted RBP38.96■■■■□ 3.83
PITPNM1-208ENST00000527103 SOGA1O94964 1423 aa38.93■■■■□ 3.82
PITPNM1-208ENST00000527103 FGD5Q6ZNL6 1462 aa38.92■■■■□ 3.82
PITPNM1-208ENST00000527103 RAD54L2Q9Y4B4 1467 aa38.89■■■■□ 3.82
PITPNM1-208ENST00000527103 TARBP1Q13395 1621 aaKnown RBP38.87■■■■□ 3.81
PITPNM1-208ENST00000527103 WRNQ14191 1432 aaPredicted RBP eCLIP38.82■■■■□ 3.81
PITPNM1-208ENST00000527103 AQRO60306 1485 aaKnown RBP eCLIP38.78■■■■□ 3.81e-9■■□□□ 11.8
PITPNM1-208ENST00000527103 TDRD9Q8NDG6 1382 aaKnown RBP38.73■■■■□ 3.79
PITPNM1-208ENST00000527103 EIF4G3O43432 1585 aaKnown RBP38.7■■■■□ 3.79
PITPNM1-208ENST00000527103 SYNJ1O43426 1573 aa38.66■■■■□ 3.78
PITPNM1-208ENST00000527103 TOP2BQ02880 1626 aa38.66■■■■□ 3.78
PITPNM1-208ENST00000527103 BIVM-ERCC5R4GMW8 1640 aa38.62■■■■□ 3.77
PITPNM1-208ENST00000527103 OSCARQ8IYS5 282 aa38.58■■■■□ 3.77
PITPNM1-208ENST00000527103 ABCA10Q8WWZ4 1543 aa38.53■■■■□ 3.76
PITPNM1-208ENST00000527103 WDR97A6NE52 1622 aa38.52■■■■□ 3.76
PITPNM1-208ENST00000527103 GAPVD1Q14C86 1478 aa38.43■■■■□ 3.74
PITPNM1-208ENST00000527103 GRIN2BQ13224 1484 aa38.42■■■■□ 3.74
PITPNM1-208ENST00000527103 FBLN2P98095 1184 aa38.4■■■■□ 3.74
PITPNM1-208ENST00000527103 SNAPC4Q5SXM2 1469 aa38.35■■■■□ 3.73
PITPNM1-208ENST00000527103 ABCA5Q8WWZ7 1642 aa38.31■■■■□ 3.72
PITPNM1-208ENST00000527103 MAGI1Q96QZ7 1491 aaPredicted RBP38.28■■■■□ 3.72
PITPNM1-208ENST00000527103 CHMP7Q8WUX9 453 aaPredicted RBP38.28■■■■□ 3.72
PITPNM1-208ENST00000527103 PBRM1Q86U86 1689 aa38.22■■■■□ 3.71
PITPNM1-208ENST00000527103 CHD1O14646 1710 aa38.21■■■■□ 3.71
PITPNM1-208ENST00000527103 SYNJ2O15056 1496 aa38.16■■■■□ 3.7
PITPNM1-208ENST00000527103 ERICH3Q5RHP9 1530 aa38.05■■■■□ 3.68
PITPNM1-208ENST00000527103 KIF27Q86VH2 1401 aa38.03■■■■□ 3.68
PITPNM1-208ENST00000527103 TRIM41Q8WV44 630 aa38.01■■■■□ 3.68
PITPNM1-208ENST00000527103 FHAD1B1AJZ9 1412 aa37.99■■■■□ 3.67
PITPNM1-208ENST00000527103 ADAMTS12P58397 1594 aa37.95■■■■□ 3.67
PITPNM1-208ENST00000527103 IGF1RP08069 1367 aa37.92■■■■□ 3.66
PITPNM1-208ENST00000527103 GRIN2AQ12879 1464 aa37.9■■■■□ 3.66
PITPNM1-208ENST00000527103 CLASP1Q7Z460 1538 aa37.83■■■■□ 3.65
PITPNM1-208ENST00000527103 ARHGEF11O15085 1522 aa37.8■■■■□ 3.64
PITPNM1-208ENST00000527103 RIMBP3CA6NJZ7 1639 aa37.79■■■■□ 3.64
PITPNM1-208ENST00000527103 RIMBP3BA6NNM3 1639 aa37.79■■■■□ 3.64
PITPNM1-208ENST00000527103 RIMBP3Q9UFD9 1639 aa37.79■■■■□ 3.64
PITPNM1-208ENST00000527103 NUP160Q12769 1436 aa37.74■■■■□ 3.63
PITPNM1-208ENST00000527103 RUSC2Q8N2Y8 1516 aa37.7■■■■□ 3.63
PITPNM1-208ENST00000527103 CARMIL1Q5VZK9 1371 aa37.68■■■■□ 3.62
PITPNM1-208ENST00000527103 CEP170Q5SW79 1584 aa37.68■■■■□ 3.62
PITPNM1-208ENST00000527103 CUL7Q14999 1698 aa37.65■■■■□ 3.62
PITPNM1-208ENST00000527103 CYB5RLQ6IPT4 315 aa37.62■■■■□ 3.61
PITPNM1-208ENST00000527103 CHIC1Q5VXU3 224 aa37.53■■■■□ 3.6
PITPNM1-208ENST00000527103 JPH4Q96JJ6 628 aa37.5■■■■□ 3.59
PITPNM1-208ENST00000527103 ARAP1Q96P48 1450 aa37.5■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms