RNA–Protein interactions for RNA: ENST00000527056.5

MS4A4A-203, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 5

Gene MS4A4A, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-203ENST00000527056 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
MS4A4A-203ENST00000527056 CCDC180Q9P1Z9 1646 aa28.02■■■□□ 2.08
MS4A4A-203ENST00000527056 ABCC9O60706 1549 aa27.72■■■□□ 2.03
MS4A4A-203ENST00000527056 RB1CC1Q8TDY2 1594 aa26.54■■□□□ 1.84
MS4A4A-203ENST00000527056 DCAF8L2P0C7V8 631 aa26.51■■□□□ 1.83
MS4A4A-203ENST00000527056 NACADO15069 1562 aa26.45■■□□□ 1.82
MS4A4A-203ENST00000527056 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
MS4A4A-203ENST00000527056 ZCCHC6Q5VYS8 1495 aaKnown RBP26.13■■□□□ 1.77
MS4A4A-203ENST00000527056 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
MS4A4A-203ENST00000527056 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.74
MS4A4A-203ENST00000527056 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
MS4A4A-203ENST00000527056 BICRAQ9NZM4 1560 aa25.69■■□□□ 1.7
MS4A4A-203ENST00000527056 DNAJC5BQ9UF47 199 aa25.64■■□□□ 1.7
MS4A4A-203ENST00000527056 SCRIBQ14160 1630 aa25.59■■□□□ 1.69
MS4A4A-203ENST00000527056 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
MS4A4A-203ENST00000527056 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
MS4A4A-203ENST00000527056 CC2D2AQ9P2K1 1620 aa25.02■■□□□ 1.6
MS4A4A-203ENST00000527056 CECR2Q9BXF3 1484 aa24.94■■□□□ 1.58
MS4A4A-203ENST00000527056 SMARCA4P51532 1647 aa24.44■■□□□ 1.5
MS4A4A-203ENST00000527056 NCAPD3P42695 1498 aa24.41■■□□□ 1.5
MS4A4A-203ENST00000527056 BAZ1AQ9NRL2 1556 aaPredicted RBP24.4■■□□□ 1.5
MS4A4A-203ENST00000527056 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.5
MS4A4A-203ENST00000527056 SMARCA2P51531 1590 aa24.35■■□□□ 1.49
MS4A4A-203ENST00000527056 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
MS4A4A-203ENST00000527056 MROH2BQ7Z745 1585 aa24.23■■□□□ 1.47
MS4A4A-203ENST00000527056 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
MS4A4A-203ENST00000527056 PEG3Q9GZU2 1588 aa24.18■■□□□ 1.46
MS4A4A-203ENST00000527056 AEBP2Q6ZN18 517 aaPredicted RBP24.11■■□□□ 1.45
MS4A4A-203ENST00000527056 WIZO95785 1651 aa23.95■■□□□ 1.42
MS4A4A-203ENST00000527056 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
MS4A4A-203ENST00000527056 NESP48681 1621 aa23.89■■□□□ 1.42
MS4A4A-203ENST00000527056 RSF1Q96T23 1441 aaPredicted RBP23.88■■□□□ 1.41
MS4A4A-203ENST00000527056 LAMC3Q9Y6N6 1575 aa23.79■■□□□ 1.4
MS4A4A-203ENST00000527056 CUX2O14529 1486 aa23.74■■□□□ 1.39
MS4A4A-203ENST00000527056 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
MS4A4A-203ENST00000527056 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
MS4A4A-203ENST00000527056 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
MS4A4A-203ENST00000527056 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
MS4A4A-203ENST00000527056 THOC2Q8NI27 1593 aaKnown RBP23.55■■□□□ 1.36
MS4A4A-203ENST00000527056 CFTRP13569 1480 aa23.49■■□□□ 1.35
MS4A4A-203ENST00000527056 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
MS4A4A-203ENST00000527056 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
MS4A4A-203ENST00000527056 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
MS4A4A-203ENST00000527056 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
MS4A4A-203ENST00000527056 WDR62O43379 1518 aa23.33■■□□□ 1.33
MS4A4A-203ENST00000527056 DNAJC5Q9H3Z4 198 aa23.31■■□□□ 1.32
MS4A4A-203ENST00000527056 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
MS4A4A-203ENST00000527056 SUPT5HO00267 1087 aaKnown RBP23.19■■□□□ 1.3
MS4A4A-203ENST00000527056 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
MS4A4A-203ENST00000527056 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
MS4A4A-203ENST00000527056 TOPBP1Q92547 1522 aa23.02■■□□□ 1.28
MS4A4A-203ENST00000527056 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
MS4A4A-203ENST00000527056 IFT140Q96RY7 1462 aa22.94■■□□□ 1.26
MS4A4A-203ENST00000527056 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
MS4A4A-203ENST00000527056 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
MS4A4A-203ENST00000527056 OSCARQ8IYS5 282 aa22.77■■□□□ 1.24
MS4A4A-203ENST00000527056 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
MS4A4A-203ENST00000527056 SOGA1O94964 1423 aa22.74■■□□□ 1.23
MS4A4A-203ENST00000527056 CUX1P39880 1505 aa22.74■■□□□ 1.23
MS4A4A-203ENST00000527056 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
MS4A4A-203ENST00000527056 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
MS4A4A-203ENST00000527056 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
MS4A4A-203ENST00000527056 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.23
MS4A4A-203ENST00000527056 TDRD9Q8NDG6 1382 aaKnown RBP22.64■■□□□ 1.22
MS4A4A-203ENST00000527056 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
MS4A4A-203ENST00000527056 FBLN2P98095 1184 aa22.56■■□□□ 1.2
MS4A4A-203ENST00000527056 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
MS4A4A-203ENST00000527056 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
MS4A4A-203ENST00000527056 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
MS4A4A-203ENST00000527056 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
MS4A4A-203ENST00000527056 SNAPC4Q5SXM2 1469 aa22.49■■□□□ 1.19
MS4A4A-203ENST00000527056 ABCA10Q8WWZ4 1543 aa22.48■■□□□ 1.19
MS4A4A-203ENST00000527056 TOP2BQ02880 1626 aa22.48■■□□□ 1.19
MS4A4A-203ENST00000527056 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
MS4A4A-203ENST00000527056 CHD1O14646 1710 aa22.46■■□□□ 1.19
MS4A4A-203ENST00000527056 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
MS4A4A-203ENST00000527056 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
MS4A4A-203ENST00000527056 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
MS4A4A-203ENST00000527056 MAGI1Q96QZ7 1491 aaPredicted RBP22.44■■□□□ 1.18
MS4A4A-203ENST00000527056 ABCA5Q8WWZ7 1642 aa22.38■■□□□ 1.17
MS4A4A-203ENST00000527056 PBRM1Q86U86 1689 aa22.37■■□□□ 1.17
MS4A4A-203ENST00000527056 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
MS4A4A-203ENST00000527056 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
MS4A4A-203ENST00000527056 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
MS4A4A-203ENST00000527056 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
MS4A4A-203ENST00000527056 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
MS4A4A-203ENST00000527056 CLASP1Q7Z460 1538 aa22.23■■□□□ 1.15
MS4A4A-203ENST00000527056 CYB5RLQ6IPT4 315 aa22.21■■□□□ 1.15
MS4A4A-203ENST00000527056 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
MS4A4A-203ENST00000527056 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
MS4A4A-203ENST00000527056 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
MS4A4A-203ENST00000527056 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
MS4A4A-203ENST00000527056 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
MS4A4A-203ENST00000527056 KIF27Q86VH2 1401 aa22.11■■□□□ 1.13
MS4A4A-203ENST00000527056 NUP160Q12769 1436 aa22.09■■□□□ 1.13
MS4A4A-203ENST00000527056 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
MS4A4A-203ENST00000527056 IGF1RP08069 1367 aa22.03■■□□□ 1.12
MS4A4A-203ENST00000527056 CUL7Q14999 1698 aa21.95■■□□□ 1.1
MS4A4A-203ENST00000527056 CARMIL1Q5VZK9 1371 aa21.92■■□□□ 1.1
MS4A4A-203ENST00000527056 JPH4Q96JJ6 628 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms