RNA–Protein interactions for RNA: ENST00000527049.1

ZNF250-204, Transcript of zinc finger protein 250, humanhuman

TSL 3

Gene ZNF250, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-204ENST00000527049 NISCHQ9Y2I1 1504 aa47.35■■■■■ 5.17
ZNF250-204ENST00000527049 CCDC180Q9P1Z9 1646 aa42.35■■■■■ 4.37
ZNF250-204ENST00000527049 ABCC9O60706 1549 aa42.27■■■■■ 4.36
ZNF250-204ENST00000527049 RB1CC1Q8TDY2 1594 aa40.23■■■■■ 4.03
ZNF250-204ENST00000527049 NACADO15069 1562 aa40■■■■□ 3.99
ZNF250-204ENST00000527049 DCAF8L2P0C7V8 631 aa39.91■■■■□ 3.98
ZNF250-204ENST00000527049 DNAJC5BQ9UF47 199 aa39.51■■■■□ 3.92
ZNF250-204ENST00000527049 MYO15BQ96JP2 1530 aa39.49■■■■□ 3.91
ZNF250-204ENST00000527049 PABPN1Q86U42 306 aaKnown RBP eCLIP39.4■■■■□ 3.9
ZNF250-204ENST00000527049 UNC13AQ9UPW8 1703 aa39.36■■■■□ 3.89
ZNF250-204ENST00000527049 ZCCHC6Q5VYS8 1495 aaKnown RBP39.31■■■■□ 3.88
ZNF250-204ENST00000527049 BICRAQ9NZM4 1560 aa39.12■■■■□ 3.85
ZNF250-204ENST00000527049 DCAF1Q9Y4B6 1507 aa39.07■■■■□ 3.84
ZNF250-204ENST00000527049 SCRIBQ14160 1630 aa38.7■■■■□ 3.79
ZNF250-204ENST00000527049 SHROOM4Q9ULL8 1493 aa38.51■■■■□ 3.76
ZNF250-204ENST00000527049 CC2D2AQ9P2K1 1620 aa38.16■■■■□ 3.7
ZNF250-204ENST00000527049 EIF4G1Q04637 1599 aaKnown RBP38.13■■■■□ 3.69
ZNF250-204ENST00000527049 CECR2Q9BXF3 1484 aa38.03■■■■□ 3.68
ZNF250-204ENST00000527049 NCAPD3P42695 1498 aa36.94■■■■□ 3.5
ZNF250-204ENST00000527049 ATAD2BQ9ULI0 1458 aa36.9■■■■□ 3.5
ZNF250-204ENST00000527049 SMARCA4P51532 1647 aa36.9■■■■□ 3.5
ZNF250-204ENST00000527049 SMARCA2P51531 1590 aa36.75■■■■□ 3.47
ZNF250-204ENST00000527049 BAZ1AQ9NRL2 1556 aaPredicted RBP36.71■■■■□ 3.47
ZNF250-204ENST00000527049 HMGXB3Q12766 1538 aa36.69■■■■□ 3.46
ZNF250-204ENST00000527049 BAZ1BQ9UIG0 1483 aaKnown RBP36.54■■■■□ 3.44
ZNF250-204ENST00000527049 MROH2BQ7Z745 1585 aa36.53■■■■□ 3.44
ZNF250-204ENST00000527049 PEG3Q9GZU2 1588 aa36.51■■■■□ 3.44
ZNF250-204ENST00000527049 ERCC6Q03468 1493 aa36.43■■■■□ 3.42
ZNF250-204ENST00000527049 NESP48681 1621 aa36.39■■■■□ 3.42
ZNF250-204ENST00000527049 CUX2O14529 1486 aa36.27■■■■□ 3.4
ZNF250-204ENST00000527049 WIZO95785 1651 aa36.09■■■■□ 3.37
ZNF250-204ENST00000527049 LAMC3Q9Y6N6 1575 aa36.06■■■■□ 3.36
ZNF250-204ENST00000527049 DNAJC5Q9H3Z4 198 aa36.04■■■■□ 3.36
ZNF250-204ENST00000527049 THOC2Q8NI27 1593 aaKnown RBP35.94■■■■□ 3.34
ZNF250-204ENST00000527049 KIF21AQ7Z4S6 1674 aa35.88■■■■□ 3.33
ZNF250-204ENST00000527049 PDS5BQ9NTI5 1447 aa35.85■■■■□ 3.33
ZNF250-204ENST00000527049 CADPSQ9ULU8 1353 aa35.85■■■■□ 3.33
ZNF250-204ENST00000527049 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
ZNF250-204ENST00000527049 TOP2AP11388 1531 aaKnown RBP35.62■■■■□ 3.29
ZNF250-204ENST00000527049 MRC2Q9UBG0 1479 aa35.57■■■■□ 3.28
ZNF250-204ENST00000527049 CFTRP13569 1480 aa35.48■■■■□ 3.27
ZNF250-204ENST00000527049 WDR62O43379 1518 aa35.47■■■■□ 3.27
ZNF250-204ENST00000527049 CEP164Q9UPV0 1460 aa35.47■■■■□ 3.27
ZNF250-204ENST00000527049 FANCD2Q9BXW9 1451 aa35.46■■■■□ 3.27
ZNF250-204ENST00000527049 CCDC88BA6NC98 1476 aa35.24■■■■□ 3.23
ZNF250-204ENST00000527049 URB2Q14146 1524 aaKnown RBP35.18■■■■□ 3.22
ZNF250-204ENST00000527049 PRDM2Q13029 1718 aa35.08■■■■□ 3.21
ZNF250-204ENST00000527049 TOPBP1Q92547 1522 aa34.81■■■■□ 3.16
ZNF250-204ENST00000527049 IFT140Q96RY7 1462 aa34.74■■■■□ 3.15
ZNF250-204ENST00000527049 ZNF608Q9ULD9 1512 aaPredicted RBP34.74■■■■□ 3.15
ZNF250-204ENST00000527049 DNMBPQ6XZF7 1577 aa34.68■■■■□ 3.14
ZNF250-204ENST00000527049 ABCC8Q09428 1581 aa34.66■■■■□ 3.14
ZNF250-204ENST00000527049 OSCARQ8IYS5 282 aa34.64■■■■□ 3.14
ZNF250-204ENST00000527049 TRIM41Q8WV44 630 aa34.61■■■■□ 3.13
ZNF250-204ENST00000527049 EIF4G3O43432 1585 aaKnown RBP34.52■■■■□ 3.12
ZNF250-204ENST00000527049 TARBP1Q13395 1621 aaKnown RBP34.48■■■■□ 3.11
ZNF250-204ENST00000527049 POLA1P09884 1462 aaPredicted RBP34.48■■■■□ 3.11
ZNF250-204ENST00000527049 AQRO60306 1485 aaKnown RBP eCLIP34.43■■■■□ 3.1
ZNF250-204ENST00000527049 SUPT5HO00267 1087 aaKnown RBP34.41■■■■□ 3.1
ZNF250-204ENST00000527049 RAD54L2Q9Y4B4 1467 aa34.39■■■■□ 3.1
ZNF250-204ENST00000527049 CUX1P39880 1505 aa34.31■■■■□ 3.08
ZNF250-204ENST00000527049 FGD5Q6ZNL6 1462 aa34.3■■■■□ 3.08
ZNF250-204ENST00000527049 SOGA1O94964 1423 aa34.3■■■■□ 3.08
ZNF250-204ENST00000527049 TDRD9Q8NDG6 1382 aaKnown RBP34.24■■■■□ 3.07
ZNF250-204ENST00000527049 RIMBP3CA6NJZ7 1639 aa34.22■■■■□ 3.07
ZNF250-204ENST00000527049 RIMBP3BA6NNM3 1639 aa34.22■■■■□ 3.07
ZNF250-204ENST00000527049 RIMBP3Q9UFD9 1639 aa34.22■■■■□ 3.07
ZNF250-204ENST00000527049 CHD1O14646 1710 aa34.2■■■■□ 3.07
ZNF250-204ENST00000527049 ARHGEF11O15085 1522 aa34.14■■■■□ 3.06
ZNF250-204ENST00000527049 FBLN2P98095 1184 aa34.14■■■■□ 3.06
ZNF250-204ENST00000527049 SNAPC4Q5SXM2 1469 aa34.08■■■■□ 3.05
ZNF250-204ENST00000527049 WDR97A6NE52 1622 aa34.06■■■■□ 3.04
ZNF250-204ENST00000527049 GRIN2BQ13224 1484 aa33.97■■■■□ 3.03
ZNF250-204ENST00000527049 MAGI1Q96QZ7 1491 aaPredicted RBP33.94■■■■□ 3.02
ZNF250-204ENST00000527049 ABCA10Q8WWZ4 1543 aa33.89■■■■□ 3.02
ZNF250-204ENST00000527049 GAPVD1Q14C86 1478 aa33.88■■■■□ 3.01
ZNF250-204ENST00000527049 CHMP7Q8WUX9 453 aaPredicted RBP33.88■■■■□ 3.01
ZNF250-204ENST00000527049 CYB5RLQ6IPT4 315 aa33.87■■■■□ 3.01
ZNF250-204ENST00000527049 PBRM1Q86U86 1689 aa33.85■■■■□ 3.01
ZNF250-204ENST00000527049 ARAP1Q96P48 1450 aa33.84■■■■□ 3.01
ZNF250-204ENST00000527049 CLASP1Q7Z460 1538 aa33.84■■■■□ 3.01
ZNF250-204ENST00000527049 SYNJ2O15056 1496 aa33.83■■■■□ 3.01
ZNF250-204ENST00000527049 ABCA5Q8WWZ7 1642 aa33.83■■■■□ 3.01
ZNF250-204ENST00000527049 SYNJ1O43426 1573 aa33.79■■■■□ 3
ZNF250-204ENST00000527049 WRNQ14191 1432 aaPredicted RBP eCLIP33.79■■■■□ 3
ZNF250-204ENST00000527049 TOP2BQ02880 1626 aa33.76■■■■□ 3
ZNF250-204ENST00000527049 BIVM-ERCC5R4GMW8 1640 aa33.76■■■■□ 3
ZNF250-204ENST00000527049 ADAMTS12P58397 1594 aa33.58■■■□□ 2.97
ZNF250-204ENST00000527049 GRIN2AQ12879 1464 aa33.56■■■□□ 2.96
ZNF250-204ENST00000527049 FHAD1B1AJZ9 1412 aa33.45■■■□□ 2.95
ZNF250-204ENST00000527049 CEP170Q5SW79 1584 aa33.45■■■□□ 2.95
ZNF250-204ENST00000527049 ERICH3Q5RHP9 1530 aa33.44■■■□□ 2.94
ZNF250-204ENST00000527049 NUP160Q12769 1436 aa33.44■■■□□ 2.94
ZNF250-204ENST00000527049 TRHP20396 242 aaPredicted RBP33.41■■■□□ 2.94
ZNF250-204ENST00000527049 ERCC6L2Q5T890 1561 aa33.38■■■□□ 2.93
ZNF250-204ENST00000527049 SHROOM2Q13796 1616 aa33.24■■■□□ 2.91
ZNF250-204ENST00000527049 KIF27Q86VH2 1401 aa33.11■■■□□ 2.89
ZNF250-204ENST00000527049 IGF1RP08069 1367 aa33.1■■■□□ 2.89
ZNF250-204ENST00000527049 RUSC2Q8N2Y8 1516 aa33.1■■■□□ 2.89
ZNF250-204ENST00000527049 PRG4Q92954 1404 aaPredicted RBP33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms