RNA–Protein interactions for RNA: ENST00000527008.1

ZNF408-203, Transcript of zinc finger protein 408, humanhuman

TSL 2

Gene ZNF408, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408-203ENST00000527008 NISCHQ9Y2I1 1504 aa24.73■■□□□ 1.55
ZNF408-203ENST00000527008 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.12
ZNF408-203ENST00000527008 ABCC9O60706 1549 aa21.62■■□□□ 1.05
ZNF408-203ENST00000527008 RB1CC1Q8TDY2 1594 aa20.77■□□□□ 0.92
ZNF408-203ENST00000527008 NACADO15069 1562 aa20.73■□□□□ 0.91
ZNF408-203ENST00000527008 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
ZNF408-203ENST00000527008 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
ZNF408-203ENST00000527008 ZCCHC6Q5VYS8 1495 aaKnown RBP20.59■□□□□ 0.89
ZNF408-203ENST00000527008 DCAF1Q9Y4B6 1507 aa20.47■□□□□ 0.87
ZNF408-203ENST00000527008 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.84
ZNF408-203ENST00000527008 PABPN1Q86U42 306 aaKnown RBP eCLIP20.19■□□□□ 0.82
ZNF408-203ENST00000527008 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
ZNF408-203ENST00000527008 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
ZNF408-203ENST00000527008 SHROOM4Q9ULL8 1493 aa19.94■□□□□ 0.78
ZNF408-203ENST00000527008 DNAJC5BQ9UF47 199 aa19.89■□□□□ 0.77
ZNF408-203ENST00000527008 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
ZNF408-203ENST00000527008 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
ZNF408-203ENST00000527008 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
ZNF408-203ENST00000527008 SMARCA4P51532 1647 aa19.21■□□□□ 0.67
ZNF408-203ENST00000527008 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
ZNF408-203ENST00000527008 NCAPD3P42695 1498 aa19.13■□□□□ 0.65
ZNF408-203ENST00000527008 ATAD2BQ9ULI0 1458 aa19.12■□□□□ 0.65
ZNF408-203ENST00000527008 SMARCA2P51531 1590 aa19.11■□□□□ 0.65
ZNF408-203ENST00000527008 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
ZNF408-203ENST00000527008 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
ZNF408-203ENST00000527008 PEG3Q9GZU2 1588 aa19.02■□□□□ 0.63
ZNF408-203ENST00000527008 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
ZNF408-203ENST00000527008 WIZO95785 1651 aa18.84■□□□□ 0.61
ZNF408-203ENST00000527008 RSF1Q96T23 1441 aaPredicted RBP18.82■□□□□ 0.6
ZNF408-203ENST00000527008 NESP48681 1621 aa18.68■□□□□ 0.58
ZNF408-203ENST00000527008 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
ZNF408-203ENST00000527008 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
ZNF408-203ENST00000527008 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
ZNF408-203ENST00000527008 CUX2O14529 1486 aa18.58■□□□□ 0.56
ZNF408-203ENST00000527008 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
ZNF408-203ENST00000527008 PDS5BQ9NTI5 1447 aa18.52■□□□□ 0.56
ZNF408-203ENST00000527008 DNAJC5Q9H3Z4 198 aa18.48■□□□□ 0.55
ZNF408-203ENST00000527008 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
ZNF408-203ENST00000527008 CFTRP13569 1480 aa18.44■□□□□ 0.54
ZNF408-203ENST00000527008 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
ZNF408-203ENST00000527008 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
ZNF408-203ENST00000527008 FANCD2Q9BXW9 1451 aa18.36■□□□□ 0.53
ZNF408-203ENST00000527008 CEP164Q9UPV0 1460 aa18.34■□□□□ 0.53
ZNF408-203ENST00000527008 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.53
ZNF408-203ENST00000527008 SUPT5HO00267 1087 aaKnown RBP18.29■□□□□ 0.52
ZNF408-203ENST00000527008 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
ZNF408-203ENST00000527008 WDR62O43379 1518 aa18.27■□□□□ 0.51
ZNF408-203ENST00000527008 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
ZNF408-203ENST00000527008 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
ZNF408-203ENST00000527008 TOPBP1Q92547 1522 aa18.06■□□□□ 0.48
ZNF408-203ENST00000527008 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
ZNF408-203ENST00000527008 IFT140Q96RY7 1462 aa17.97■□□□□ 0.47
ZNF408-203ENST00000527008 POLA1P09884 1462 aaPredicted RBP17.89■□□□□ 0.45
ZNF408-203ENST00000527008 CUX1P39880 1505 aa17.88■□□□□ 0.45
ZNF408-203ENST00000527008 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
ZNF408-203ENST00000527008 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
ZNF408-203ENST00000527008 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
ZNF408-203ENST00000527008 SOGA1O94964 1423 aa17.82■□□□□ 0.44
ZNF408-203ENST00000527008 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
ZNF408-203ENST00000527008 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
ZNF408-203ENST00000527008 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.432e-7■■■■■ 36.4
ZNF408-203ENST00000527008 WRNQ14191 1432 aaPredicted RBP eCLIP17.75■□□□□ 0.43
ZNF408-203ENST00000527008 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
ZNF408-203ENST00000527008 WDR97A6NE52 1622 aa17.72■□□□□ 0.43
ZNF408-203ENST00000527008 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
ZNF408-203ENST00000527008 OSCARQ8IYS5 282 aa17.71■□□□□ 0.43
ZNF408-203ENST00000527008 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
ZNF408-203ENST00000527008 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
ZNF408-203ENST00000527008 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
ZNF408-203ENST00000527008 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
ZNF408-203ENST00000527008 GRIN2BQ13224 1484 aa17.63■□□□□ 0.41
ZNF408-203ENST00000527008 GAPVD1Q14C86 1478 aa17.62■□□□□ 0.41
ZNF408-203ENST00000527008 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
ZNF408-203ENST00000527008 MAGI1Q96QZ7 1491 aaPredicted RBP17.6■□□□□ 0.41
ZNF408-203ENST00000527008 ABCA5Q8WWZ7 1642 aa17.6■□□□□ 0.41
ZNF408-203ENST00000527008 CHD1O14646 1710 aa17.59■□□□□ 0.41
ZNF408-203ENST00000527008 FBLN2P98095 1184 aa17.58■□□□□ 0.4
ZNF408-203ENST00000527008 PBRM1Q86U86 1689 aa17.58■□□□□ 0.4
ZNF408-203ENST00000527008 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
ZNF408-203ENST00000527008 SYNJ2O15056 1496 aa17.52■□□□□ 0.4
ZNF408-203ENST00000527008 RIMBP3CA6NJZ7 1639 aa17.51■□□□□ 0.39
ZNF408-203ENST00000527008 RIMBP3BA6NNM3 1639 aa17.51■□□□□ 0.39
ZNF408-203ENST00000527008 RIMBP3Q9UFD9 1639 aa17.51■□□□□ 0.39
ZNF408-203ENST00000527008 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
ZNF408-203ENST00000527008 ADAMTS12P58397 1594 aa17.45■□□□□ 0.38
ZNF408-203ENST00000527008 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
ZNF408-203ENST00000527008 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
ZNF408-203ENST00000527008 CLASP1Q7Z460 1538 aa17.41■□□□□ 0.38
ZNF408-203ENST00000527008 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
ZNF408-203ENST00000527008 GRIN2AQ12879 1464 aa17.4■□□□□ 0.38
ZNF408-203ENST00000527008 NUP160Q12769 1436 aa17.32■□□□□ 0.36
ZNF408-203ENST00000527008 IGF1RP08069 1367 aa17.31■□□□□ 0.36
ZNF408-203ENST00000527008 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
ZNF408-203ENST00000527008 CUL7Q14999 1698 aa17.29■□□□□ 0.36
ZNF408-203ENST00000527008 ARAP1Q96P48 1450 aa17.26■□□□□ 0.35
ZNF408-203ENST00000527008 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
ZNF408-203ENST00000527008 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
ZNF408-203ENST00000527008 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
ZNF408-203ENST00000527008 RUSC2Q8N2Y8 1516 aa17.19■□□□□ 0.34
ZNF408-203ENST00000527008 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms