RNA–Protein interactions for RNA: ENST00000526993.1

PSMC3-203, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-203ENST00000526993 NISCHQ9Y2I1 1504 aa47.68■■■■■ 5.22
PSMC3-203ENST00000526993 CCDC180Q9P1Z9 1646 aa42.51■■■■■ 4.4
PSMC3-203ENST00000526993 ABCC9O60706 1549 aa41.92■■■■■ 4.3
PSMC3-203ENST00000526993 RB1CC1Q8TDY2 1594 aa40.18■■■■■ 4.02
PSMC3-203ENST00000526993 DCAF8L2P0C7V8 631 aa40.1■■■■■ 4.01
PSMC3-203ENST00000526993 NACADO15069 1562 aa40.04■■■■■ 4
PSMC3-203ENST00000526993 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
PSMC3-203ENST00000526993 ZCCHC6Q5VYS8 1495 aaKnown RBP39.64■■■■□ 3.94
PSMC3-203ENST00000526993 DCAF1Q9Y4B6 1507 aa39.4■■■■□ 3.9
PSMC3-203ENST00000526993 UNC13AQ9UPW8 1703 aa39.26■■■■□ 3.87
PSMC3-203ENST00000526993 PABPN1Q86U42 306 aaKnown RBP eCLIP39.15■■■■□ 3.86
PSMC3-203ENST00000526993 BICRAQ9NZM4 1560 aa38.93■■■■□ 3.82
PSMC3-203ENST00000526993 SCRIBQ14160 1630 aa38.83■■■■□ 3.81
PSMC3-203ENST00000526993 DNAJC5BQ9UF47 199 aa38.69■■■■□ 3.78
PSMC3-203ENST00000526993 SHROOM4Q9ULL8 1493 aa38.48■■■■□ 3.75
PSMC3-203ENST00000526993 EIF4G1Q04637 1599 aaKnown RBP37.95■■■■□ 3.67
PSMC3-203ENST00000526993 CC2D2AQ9P2K1 1620 aa37.88■■■■□ 3.65
PSMC3-203ENST00000526993 CECR2Q9BXF3 1484 aa37.69■■■■□ 3.62
PSMC3-203ENST00000526993 SMARCA4P51532 1647 aa37.07■■■■□ 3.53
PSMC3-203ENST00000526993 BAZ1AQ9NRL2 1556 aaPredicted RBP37■■■■□ 3.51
PSMC3-203ENST00000526993 NCAPD3P42695 1498 aa36.93■■■■□ 3.5
PSMC3-203ENST00000526993 ATAD2BQ9ULI0 1458 aa36.93■■■■□ 3.5
PSMC3-203ENST00000526993 SMARCA2P51531 1590 aa36.89■■■■□ 3.5
PSMC3-203ENST00000526993 MROH2BQ7Z745 1585 aa36.76■■■■□ 3.48
PSMC3-203ENST00000526993 HMGXB3Q12766 1538 aa36.74■■■■□ 3.47
PSMC3-203ENST00000526993 PEG3Q9GZU2 1588 aa36.66■■■■□ 3.46
PSMC3-203ENST00000526993 BAZ1BQ9UIG0 1483 aaKnown RBP36.65■■■■□ 3.46
PSMC3-203ENST00000526993 WIZO95785 1651 aa36.37■■■■□ 3.41
PSMC3-203ENST00000526993 RSF1Q96T23 1441 aaPredicted RBP36.23■■■■□ 3.39
PSMC3-203ENST00000526993 ERCC6Q03468 1493 aa36.18■■■■□ 3.38
PSMC3-203ENST00000526993 NESP48681 1621 aa36.18■■■■□ 3.38
PSMC3-203ENST00000526993 LAMC3Q9Y6N6 1575 aa36.02■■■■□ 3.36
PSMC3-203ENST00000526993 TOP2AP11388 1531 aaKnown RBP35.94■■■■□ 3.34
PSMC3-203ENST00000526993 CADPSQ9ULU8 1353 aa35.87■■■■□ 3.33
PSMC3-203ENST00000526993 CUX2O14529 1486 aa35.84■■■■□ 3.33
PSMC3-203ENST00000526993 PDS5BQ9NTI5 1447 aa35.82■■■■□ 3.32
PSMC3-203ENST00000526993 KIF21AQ7Z4S6 1674 aa35.75■■■■□ 3.31
PSMC3-203ENST00000526993 THOC2Q8NI27 1593 aaKnown RBP35.66■■■■□ 3.3
PSMC3-203ENST00000526993 CFTRP13569 1480 aa35.58■■■■□ 3.29
PSMC3-203ENST00000526993 CCDC88BA6NC98 1476 aa35.54■■■■□ 3.28
PSMC3-203ENST00000526993 FANCD2Q9BXW9 1451 aa35.48■■■■□ 3.27
PSMC3-203ENST00000526993 CEP164Q9UPV0 1460 aa35.47■■■■□ 3.27
PSMC3-203ENST00000526993 MRC2Q9UBG0 1479 aa35.46■■■■□ 3.27
PSMC3-203ENST00000526993 WDR62O43379 1518 aa35.32■■■■□ 3.25
PSMC3-203ENST00000526993 PRDM2Q13029 1718 aa35.32■■■■□ 3.24
PSMC3-203ENST00000526993 SUPT5HO00267 1087 aaKnown RBP35.21■■■■□ 3.23
PSMC3-203ENST00000526993 URB2Q14146 1524 aaKnown RBP35.13■■■■□ 3.21
PSMC3-203ENST00000526993 DNAJC5Q9H3Z4 198 aa35.07■■■■□ 3.2
PSMC3-203ENST00000526993 TOPBP1Q92547 1522 aa34.87■■■■□ 3.17
PSMC3-203ENST00000526993 ABCC8Q09428 1581 aa34.85■■■■□ 3.17
PSMC3-203ENST00000526993 DNMBPQ6XZF7 1577 aa34.81■■■■□ 3.16
PSMC3-203ENST00000526993 IFT140Q96RY7 1462 aa34.72■■■■□ 3.15
PSMC3-203ENST00000526993 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
PSMC3-203ENST00000526993 POLA1P09884 1462 aaPredicted RBP34.55■■■■□ 3.12
PSMC3-203ENST00000526993 CUX1P39880 1505 aa34.5■■■■□ 3.11
PSMC3-203ENST00000526993 TARBP1Q13395 1621 aaKnown RBP34.49■■■■□ 3.11
PSMC3-203ENST00000526993 EIF4G3O43432 1585 aaKnown RBP34.45■■■■□ 3.1
PSMC3-203ENST00000526993 FGD5Q6ZNL6 1462 aa34.44■■■■□ 3.1
PSMC3-203ENST00000526993 SOGA1O94964 1423 aa34.43■■■■□ 3.1
PSMC3-203ENST00000526993 RAD54L2Q9Y4B4 1467 aa34.43■■■■□ 3.1
PSMC3-203ENST00000526993 AQRO60306 1485 aaKnown RBP eCLIP34.38■■■■□ 3.094e-7■■■□□ 16.8
PSMC3-203ENST00000526993 OSCARQ8IYS5 282 aa34.35■■■■□ 3.09
PSMC3-203ENST00000526993 TDRD9Q8NDG6 1382 aaKnown RBP34.28■■■■□ 3.08
PSMC3-203ENST00000526993 WRNQ14191 1432 aaPredicted RBP eCLIP34.2■■■■□ 3.06
PSMC3-203ENST00000526993 WDR97A6NE52 1622 aa34.19■■■■□ 3.06
PSMC3-203ENST00000526993 TOP2BQ02880 1626 aa34.13■■■■□ 3.05
PSMC3-203ENST00000526993 BIVM-ERCC5R4GMW8 1640 aa34.13■■■■□ 3.05
PSMC3-203ENST00000526993 SYNJ1O43426 1573 aa34.11■■■■□ 3.05
PSMC3-203ENST00000526993 FBLN2P98095 1184 aa34.1■■■■□ 3.05
PSMC3-203ENST00000526993 CHD1O14646 1710 aa34.08■■■■□ 3.05
PSMC3-203ENST00000526993 ABCA10Q8WWZ4 1543 aa34.07■■■■□ 3.04
PSMC3-203ENST00000526993 GRIN2BQ13224 1484 aa34.06■■■■□ 3.04
PSMC3-203ENST00000526993 SNAPC4Q5SXM2 1469 aa34.05■■■■□ 3.04
PSMC3-203ENST00000526993 GAPVD1Q14C86 1478 aa34.02■■■■□ 3.04
PSMC3-203ENST00000526993 PBRM1Q86U86 1689 aa33.97■■■■□ 3.03
PSMC3-203ENST00000526993 MAGI1Q96QZ7 1491 aaPredicted RBP33.97■■■■□ 3.03
PSMC3-203ENST00000526993 ABCA5Q8WWZ7 1642 aa33.97■■■■□ 3.03
PSMC3-203ENST00000526993 CHMP7Q8WUX9 453 aaPredicted RBP33.92■■■■□ 3.02
PSMC3-203ENST00000526993 TRIM41Q8WV44 630 aa33.9■■■■□ 3.02
PSMC3-203ENST00000526993 SYNJ2O15056 1496 aa33.85■■■■□ 3.01
PSMC3-203ENST00000526993 RIMBP3CA6NJZ7 1639 aa33.81■■■■□ 3
PSMC3-203ENST00000526993 RIMBP3BA6NNM3 1639 aa33.81■■■■□ 3
PSMC3-203ENST00000526993 RIMBP3Q9UFD9 1639 aa33.81■■■■□ 3
PSMC3-203ENST00000526993 ARHGEF11O15085 1522 aa33.77■■■■□ 3
PSMC3-203ENST00000526993 ERICH3Q5RHP9 1530 aa33.67■■■□□ 2.98
PSMC3-203ENST00000526993 ADAMTS12P58397 1594 aa33.67■■■□□ 2.98
PSMC3-203ENST00000526993 CLASP1Q7Z460 1538 aa33.66■■■□□ 2.98
PSMC3-203ENST00000526993 FHAD1B1AJZ9 1412 aa33.62■■■□□ 2.97
PSMC3-203ENST00000526993 GRIN2AQ12879 1464 aa33.61■■■□□ 2.97
PSMC3-203ENST00000526993 CYB5RLQ6IPT4 315 aa33.52■■■□□ 2.96
PSMC3-203ENST00000526993 KIF27Q86VH2 1401 aa33.51■■■□□ 2.95
PSMC3-203ENST00000526993 ARAP1Q96P48 1450 aa33.46■■■□□ 2.95
PSMC3-203ENST00000526993 CEP170Q5SW79 1584 aa33.45■■■□□ 2.95
PSMC3-203ENST00000526993 NUP160Q12769 1436 aa33.44■■■□□ 2.94
PSMC3-203ENST00000526993 IGF1RP08069 1367 aa33.38■■■□□ 2.93
PSMC3-203ENST00000526993 CUL7Q14999 1698 aa33.33■■■□□ 2.93
PSMC3-203ENST00000526993 SHROOM2Q13796 1616 aa33.22■■■□□ 2.91
PSMC3-203ENST00000526993 CARMIL1Q5VZK9 1371 aa33.21■■■□□ 2.91
PSMC3-203ENST00000526993 ERCC6L2Q5T890 1561 aa33.2■■■□□ 2.91
PSMC3-203ENST00000526993 RUSC2Q8N2Y8 1516 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms