RNA–Protein interactions for RNA: ENST00000526980.5

CSF3R-214, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 928 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-214ENST00000526980 NISCHQ9Y2I1 1504 aa34.99■■■■□ 3.19
CSF3R-214ENST00000526980 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.55
CSF3R-214ENST00000526980 ABCC9O60706 1549 aa29.74■■■□□ 2.35
CSF3R-214ENST00000526980 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
CSF3R-214ENST00000526980 DCAF8L2P0C7V8 631 aa29.09■■■□□ 2.25
CSF3R-214ENST00000526980 DCAF1Q9Y4B6 1507 aa28.97■■■□□ 2.23
CSF3R-214ENST00000526980 NACADO15069 1562 aa28.94■■■□□ 2.22
CSF3R-214ENST00000526980 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.22
CSF3R-214ENST00000526980 RB1CC1Q8TDY2 1594 aa28.87■■■□□ 2.21
CSF3R-214ENST00000526980 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
CSF3R-214ENST00000526980 SCRIBQ14160 1630 aa28.28■■■□□ 2.12
CSF3R-214ENST00000526980 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
CSF3R-214ENST00000526980 BICRAQ9NZM4 1560 aa27.92■■■□□ 2.06
CSF3R-214ENST00000526980 PABPN1Q86U42 306 aaKnown RBP eCLIP27.86■■■□□ 2.05
CSF3R-214ENST00000526980 CECR2Q9BXF3 1484 aa27.18■■□□□ 1.94
CSF3R-214ENST00000526980 EIF4G1Q04637 1599 aaKnown RBP27.17■■□□□ 1.94
CSF3R-214ENST00000526980 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
CSF3R-214ENST00000526980 SMARCA4P51532 1647 aa27.08■■□□□ 1.93
CSF3R-214ENST00000526980 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
CSF3R-214ENST00000526980 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
CSF3R-214ENST00000526980 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
CSF3R-214ENST00000526980 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
CSF3R-214ENST00000526980 WIZO95785 1651 aa26.76■■□□□ 1.87
CSF3R-214ENST00000526980 PEG3Q9GZU2 1588 aa26.76■■□□□ 1.87
CSF3R-214ENST00000526980 ATAD2BQ9ULI0 1458 aa26.74■■□□□ 1.87
CSF3R-214ENST00000526980 DNAJC5BQ9UF47 199 aa26.74■■□□□ 1.87
CSF3R-214ENST00000526980 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
CSF3R-214ENST00000526980 SUPT5HO00267 1087 aaKnown RBP26.61■■□□□ 1.85
CSF3R-214ENST00000526980 BAZ1BQ9UIG0 1483 aaKnown RBP26.61■■□□□ 1.85
CSF3R-214ENST00000526980 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
CSF3R-214ENST00000526980 TOP2AP11388 1531 aaKnown RBP26.49■■□□□ 1.83
CSF3R-214ENST00000526980 CCDC88BA6NC98 1476 aa26.15■■□□□ 1.78
CSF3R-214ENST00000526980 LAMC3Q9Y6N6 1575 aa25.93■■□□□ 1.74
CSF3R-214ENST00000526980 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
CSF3R-214ENST00000526980 NESP48681 1621 aa25.87■■□□□ 1.73
CSF3R-214ENST00000526980 CFTRP13569 1480 aa25.86■■□□□ 1.73
CSF3R-214ENST00000526980 PRDM2Q13029 1718 aa25.86■■□□□ 1.73
CSF3R-214ENST00000526980 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
CSF3R-214ENST00000526980 KIF21AQ7Z4S6 1674 aa25.66■■□□□ 1.7
CSF3R-214ENST00000526980 FANCD2Q9BXW9 1451 aa25.64■■□□□ 1.69
CSF3R-214ENST00000526980 ERCC6Q03468 1493 aa25.63■■□□□ 1.69
CSF3R-214ENST00000526980 CEP164Q9UPV0 1460 aa25.58■■□□□ 1.69
CSF3R-214ENST00000526980 MRC2Q9UBG0 1479 aa25.41■■□□□ 1.66
CSF3R-214ENST00000526980 THOC2Q8NI27 1593 aaKnown RBP25.39■■□□□ 1.65
CSF3R-214ENST00000526980 ABCC8Q09428 1581 aa25.38■■□□□ 1.65
CSF3R-214ENST00000526980 URB2Q14146 1524 aaKnown RBP25.33■■□□□ 1.65
CSF3R-214ENST00000526980 DNMBPQ6XZF7 1577 aa25.33■■□□□ 1.65
CSF3R-214ENST00000526980 WRNQ14191 1432 aaPredicted RBP eCLIP25.32■■□□□ 1.64
CSF3R-214ENST00000526980 WDR62O43379 1518 aa25.31■■□□□ 1.64
CSF3R-214ENST00000526980 TOPBP1Q92547 1522 aa25.28■■□□□ 1.64
CSF3R-214ENST00000526980 CUX1P39880 1505 aa25.27■■□□□ 1.64
CSF3R-214ENST00000526980 BIVM-ERCC5R4GMW8 1640 aa25.25■■□□□ 1.63
CSF3R-214ENST00000526980 SYNJ1O43426 1573 aa25.24■■□□□ 1.63
CSF3R-214ENST00000526980 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
CSF3R-214ENST00000526980 CUX2O14529 1486 aa25.14■■□□□ 1.61
CSF3R-214ENST00000526980 FGD5Q6ZNL6 1462 aa25.13■■□□□ 1.61
CSF3R-214ENST00000526980 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
CSF3R-214ENST00000526980 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
CSF3R-214ENST00000526980 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
CSF3R-214ENST00000526980 SOGA1O94964 1423 aa25.02■■□□□ 1.6
CSF3R-214ENST00000526980 IFT140Q96RY7 1462 aa25.01■■□□□ 1.59
CSF3R-214ENST00000526980 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
CSF3R-214ENST00000526980 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
CSF3R-214ENST00000526980 WDR97A6NE52 1622 aa24.94■■□□□ 1.58
CSF3R-214ENST00000526980 ABCA10Q8WWZ4 1543 aa24.9■■□□□ 1.58
CSF3R-214ENST00000526980 ZNF608Q9ULD9 1512 aaPredicted RBP24.81■■□□□ 1.56
CSF3R-214ENST00000526980 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
CSF3R-214ENST00000526980 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
CSF3R-214ENST00000526980 ABCA5Q8WWZ7 1642 aa24.78■■□□□ 1.56
CSF3R-214ENST00000526980 KIF27Q86VH2 1401 aa24.77■■□□□ 1.56
CSF3R-214ENST00000526980 AQRO60306 1485 aaKnown RBP eCLIP24.76■■□□□ 1.553e-11■■■■■ 51.4
CSF3R-214ENST00000526980 GAPVD1Q14C86 1478 aa24.75■■□□□ 1.55
CSF3R-214ENST00000526980 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
CSF3R-214ENST00000526980 GRIN2BQ13224 1484 aa24.67■■□□□ 1.54
CSF3R-214ENST00000526980 RUSC2Q8N2Y8 1516 aa24.66■■□□□ 1.54
CSF3R-214ENST00000526980 EEA1Q15075 1411 aa24.65■■□□□ 1.54
CSF3R-214ENST00000526980 ERICH3Q5RHP9 1530 aa24.63■■□□□ 1.53
CSF3R-214ENST00000526980 FAM9AQ8IZU1 332 aaPredicted RBP24.59■■□□□ 1.53
CSF3R-214ENST00000526980 SNAPC4Q5SXM2 1469 aa24.57■■□□□ 1.52
CSF3R-214ENST00000526980 CUL7Q14999 1698 aa24.56■■□□□ 1.52
CSF3R-214ENST00000526980 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
CSF3R-214ENST00000526980 IGF1RP08069 1367 aa24.54■■□□□ 1.52
CSF3R-214ENST00000526980 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
CSF3R-214ENST00000526980 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
CSF3R-214ENST00000526980 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
CSF3R-214ENST00000526980 CARMIL1Q5VZK9 1371 aa24.46■■□□□ 1.51
CSF3R-214ENST00000526980 CHD1O14646 1710 aa24.44■■□□□ 1.5
CSF3R-214ENST00000526980 SYNJ2O15056 1496 aa24.44■■□□□ 1.5
CSF3R-214ENST00000526980 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
CSF3R-214ENST00000526980 FBLN2P98095 1184 aa24.41■■□□□ 1.5
CSF3R-214ENST00000526980 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
CSF3R-214ENST00000526980 PRXQ9BXM0 1461 aa24.38■■□□□ 1.49
CSF3R-214ENST00000526980 KIF21BO75037 1637 aa24.36■■□□□ 1.49
CSF3R-214ENST00000526980 GRIN2AQ12879 1464 aa24.34■■□□□ 1.49
CSF3R-214ENST00000526980 GOLGA3Q08378 1498 aa24.26■■□□□ 1.47
CSF3R-214ENST00000526980 EHMT2Q96KQ7 1210 aa24.24■■□□□ 1.47
CSF3R-214ENST00000526980 CTTNBP2Q8WZ74 1663 aa24.21■■□□□ 1.47
CSF3R-214ENST00000526980 CEP170Q5SW79 1584 aa24.2■■□□□ 1.47
CSF3R-214ENST00000526980 OSCARQ8IYS5 282 aa24.2■■□□□ 1.46
CSF3R-214ENST00000526980 NUP160Q12769 1436 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms