RNA–Protein interactions for RNA: ENST00000526944.1

ME3-207, Transcript of malic enzyme 3, humanhuman

TSL 3

Gene ME3, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-207ENST00000526944 NISCHQ9Y2I1 1504 aa54.8■■■■■ 6.36
ME3-207ENST00000526944 CCDC180Q9P1Z9 1646 aa48.72■■■■■ 5.39
ME3-207ENST00000526944 ABCC9O60706 1549 aa47.55■■■■■ 5.2
ME3-207ENST00000526944 RB1CC1Q8TDY2 1594 aa45.84■■■■■ 4.93
ME3-207ENST00000526944 DCAF8L2P0C7V8 631 aa45.83■■■■■ 4.93
ME3-207ENST00000526944 NACADO15069 1562 aa45.8■■■■■ 4.92
ME3-207ENST00000526944 ZCCHC6Q5VYS8 1495 aaKnown RBP45.65■■■■■ 4.9
ME3-207ENST00000526944 MYO15BQ96JP2 1530 aa45.55■■■■■ 4.88
ME3-207ENST00000526944 DCAF1Q9Y4B6 1507 aa45.37■■■■■ 4.85
ME3-207ENST00000526944 UNC13AQ9UPW8 1703 aa44.72■■■■■ 4.75
ME3-207ENST00000526944 PABPN1Q86U42 306 aaKnown RBP eCLIP44.45■■■■■ 4.71
ME3-207ENST00000526944 SCRIBQ14160 1630 aa44.42■■■■■ 4.7
ME3-207ENST00000526944 BICRAQ9NZM4 1560 aa44.34■■■■■ 4.69
ME3-207ENST00000526944 SHROOM4Q9ULL8 1493 aa44.01■■■■■ 4.64
ME3-207ENST00000526944 DNAJC5BQ9UF47 199 aa43.49■■■■■ 4.55
ME3-207ENST00000526944 EIF4G1Q04637 1599 aaKnown RBP43.22■■■■■ 4.51
ME3-207ENST00000526944 CC2D2AQ9P2K1 1620 aa43.02■■■■■ 4.48
ME3-207ENST00000526944 CECR2Q9BXF3 1484 aa42.74■■■■■ 4.43
ME3-207ENST00000526944 BAZ1AQ9NRL2 1556 aaPredicted RBP42.51■■■■■ 4.4
ME3-207ENST00000526944 SMARCA4P51532 1647 aa42.5■■■■■ 4.39
ME3-207ENST00000526944 SMARCA2P51531 1590 aa42.26■■■■■ 4.36
ME3-207ENST00000526944 ATAD2BQ9ULI0 1458 aa42.25■■■■■ 4.35
ME3-207ENST00000526944 NCAPD3P42695 1498 aa42.23■■■■■ 4.35
ME3-207ENST00000526944 MROH2BQ7Z745 1585 aa42.2■■■■■ 4.35
ME3-207ENST00000526944 PEG3Q9GZU2 1588 aa42.1■■■■■ 4.33
ME3-207ENST00000526944 HMGXB3Q12766 1538 aa42.04■■■■■ 4.32
ME3-207ENST00000526944 BAZ1BQ9UIG0 1483 aaKnown RBP41.95■■■■■ 4.31
ME3-207ENST00000526944 WIZO95785 1651 aa41.77■■■■■ 4.28
ME3-207ENST00000526944 RSF1Q96T23 1441 aaPredicted RBP41.77■■■■■ 4.28
ME3-207ENST00000526944 TOP2AP11388 1531 aaKnown RBP41.36■■■■■ 4.21
ME3-207ENST00000526944 LAMC3Q9Y6N6 1575 aa41.14■■■■■ 4.18
ME3-207ENST00000526944 NESP48681 1621 aa41.14■■■■■ 4.18
ME3-207ENST00000526944 ERCC6Q03468 1493 aa41.05■■■■■ 4.16
ME3-207ENST00000526944 CADPSQ9ULU8 1353 aa41.02■■■■■ 4.16
ME3-207ENST00000526944 PDS5BQ9NTI5 1447 aa40.88■■■■■ 4.13
ME3-207ENST00000526944 CCDC88BA6NC98 1476 aa40.85■■■■■ 4.13
ME3-207ENST00000526944 SUPT5HO00267 1087 aaKnown RBP40.83■■■■■ 4.13
ME3-207ENST00000526944 CFTRP13569 1480 aa40.77■■■■■ 4.12
ME3-207ENST00000526944 KIF21AQ7Z4S6 1674 aa40.69■■■■■ 4.1
ME3-207ENST00000526944 CUX2O14529 1486 aa40.57■■■■■ 4.08
ME3-207ENST00000526944 FANCD2Q9BXW9 1451 aa40.55■■■■■ 4.08
ME3-207ENST00000526944 THOC2Q8NI27 1593 aaKnown RBP40.52■■■■■ 4.08
ME3-207ENST00000526944 CEP164Q9UPV0 1460 aa40.51■■■■■ 4.07
ME3-207ENST00000526944 PRDM2Q13029 1718 aa40.5■■■■■ 4.07
ME3-207ENST00000526944 MRC2Q9UBG0 1479 aa40.42■■■■■ 4.06
ME3-207ENST00000526944 WDR62O43379 1518 aa40.26■■■■■ 4.03
ME3-207ENST00000526944 URB2Q14146 1524 aaKnown RBP40.09■■■■■ 4.01
ME3-207ENST00000526944 ABCC8Q09428 1581 aa39.98■■■■□ 3.99
ME3-207ENST00000526944 TOPBP1Q92547 1522 aa39.89■■■■□ 3.98
ME3-207ENST00000526944 DNMBPQ6XZF7 1577 aa39.87■■■■□ 3.97
ME3-207ENST00000526944 IFT140Q96RY7 1462 aa39.66■■■■□ 3.94
ME3-207ENST00000526944 CUX1P39880 1505 aa39.59■■■■□ 3.93
ME3-207ENST00000526944 POLA1P09884 1462 aaPredicted RBP39.55■■■■□ 3.92
ME3-207ENST00000526944 FGD5Q6ZNL6 1462 aa39.48■■■■□ 3.91
ME3-207ENST00000526944 SOGA1O94964 1423 aa39.43■■■■□ 3.9
ME3-207ENST00000526944 WRNQ14191 1432 aaPredicted RBP eCLIP39.43■■■■□ 3.9
ME3-207ENST00000526944 TARBP1Q13395 1621 aaKnown RBP39.43■■■■□ 3.9
ME3-207ENST00000526944 ZNF608Q9ULD9 1512 aaPredicted RBP39.39■■■■□ 3.9
ME3-207ENST00000526944 RAD54L2Q9Y4B4 1467 aa39.36■■■■□ 3.89
ME3-207ENST00000526944 TOP2BQ02880 1626 aa39.32■■■■□ 3.88
ME3-207ENST00000526944 BIVM-ERCC5R4GMW8 1640 aa39.3■■■■□ 3.88
ME3-207ENST00000526944 EIF4G3O43432 1585 aaKnown RBP39.28■■■■□ 3.88
ME3-207ENST00000526944 SYNJ1O43426 1573 aa39.26■■■■□ 3.88
ME3-207ENST00000526944 AQRO60306 1485 aaKnown RBP eCLIP39.21■■■■□ 3.87
ME3-207ENST00000526944 WDR97A6NE52 1622 aa39.21■■■■□ 3.87
ME3-207ENST00000526944 DNAJC5Q9H3Z4 198 aa39.19■■■■□ 3.86
ME3-207ENST00000526944 TDRD9Q8NDG6 1382 aaKnown RBP39.17■■■■□ 3.86
ME3-207ENST00000526944 ABCA10Q8WWZ4 1543 aa39.11■■■■□ 3.85
ME3-207ENST00000526944 GAPVD1Q14C86 1478 aa38.98■■■■□ 3.83
ME3-207ENST00000526944 GRIN2BQ13224 1484 aa38.97■■■■□ 3.83
ME3-207ENST00000526944 OSCARQ8IYS5 282 aa38.93■■■■□ 3.82
ME3-207ENST00000526944 ABCA5Q8WWZ7 1642 aa38.92■■■■□ 3.82
ME3-207ENST00000526944 PBRM1Q86U86 1689 aa38.87■■■■□ 3.81
ME3-207ENST00000526944 SNAPC4Q5SXM2 1469 aa38.86■■■■□ 3.81
ME3-207ENST00000526944 MAGI1Q96QZ7 1491 aaPredicted RBP38.86■■■■□ 3.81
ME3-207ENST00000526944 FBLN2P98095 1184 aa38.81■■■■□ 3.8
ME3-207ENST00000526944 CHD1O14646 1710 aa38.77■■■■□ 3.8
ME3-207ENST00000526944 CHMP7Q8WUX9 453 aaPredicted RBP38.73■■■■□ 3.79
ME3-207ENST00000526944 SYNJ2O15056 1496 aa38.7■■■■□ 3.79
ME3-207ENST00000526944 ERICH3Q5RHP9 1530 aa38.67■■■■□ 3.78
ME3-207ENST00000526944 KIF27Q86VH2 1401 aa38.63■■■■□ 3.77
ME3-207ENST00000526944 TRIM41Q8WV44 630 aa38.61■■■■□ 3.77
ME3-207ENST00000526944 ADAMTS12P58397 1594 aa38.55■■■■□ 3.76
ME3-207ENST00000526944 FHAD1B1AJZ9 1412 aa38.54■■■■□ 3.76
ME3-207ENST00000526944 GRIN2AQ12879 1464 aa38.44■■■■□ 3.74
ME3-207ENST00000526944 IGF1RP08069 1367 aa38.4■■■■□ 3.74
ME3-207ENST00000526944 CUL7Q14999 1698 aa38.35■■■■□ 3.73
ME3-207ENST00000526944 CLASP1Q7Z460 1538 aa38.33■■■■□ 3.73
ME3-207ENST00000526944 NUP160Q12769 1436 aa38.25■■■■□ 3.71
ME3-207ENST00000526944 ARHGEF11O15085 1522 aa38.23■■■■□ 3.71
ME3-207ENST00000526944 RIMBP3CA6NJZ7 1639 aa38.23■■■■□ 3.71
ME3-207ENST00000526944 RIMBP3BA6NNM3 1639 aa38.23■■■■□ 3.71
ME3-207ENST00000526944 RIMBP3Q9UFD9 1639 aa38.23■■■■□ 3.71
ME3-207ENST00000526944 CEP170Q5SW79 1584 aa38.22■■■■□ 3.71
ME3-207ENST00000526944 CARMIL1Q5VZK9 1371 aa38.21■■■■□ 3.71
ME3-207ENST00000526944 RUSC2Q8N2Y8 1516 aa38.18■■■■□ 3.7
ME3-207ENST00000526944 CHIC1Q5VXU3 224 aa38.11■■■■□ 3.69
ME3-207ENST00000526944 RAPGEF2Q9Y4G8 1499 aa38■■■■□ 3.67
ME3-207ENST00000526944 EEA1Q15075 1411 aa37.96■■■■□ 3.67
ME3-207ENST00000526944 SHROOM2Q13796 1616 aa37.94■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms