RNA–Protein interactions for RNA: ENST00000526827.1

C11orf49-210, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-210ENST00000526827 NISCHQ9Y2I1 1504 aa34.31■■■■□ 3.08
C11orf49-210ENST00000526827 ABCC9O60706 1549 aa31.32■■■□□ 2.6
C11orf49-210ENST00000526827 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
C11orf49-210ENST00000526827 DNAJC5BQ9UF47 199 aa29.82■■■□□ 2.36
C11orf49-210ENST00000526827 RB1CC1Q8TDY2 1594 aa29.53■■■□□ 2.32
C11orf49-210ENST00000526827 DCAF8L2P0C7V8 631 aa29.27■■■□□ 2.28
C11orf49-210ENST00000526827 NACADO15069 1562 aa29.23■■■□□ 2.27
C11orf49-210ENST00000526827 PABPN1Q86U42 306 aaKnown RBP eCLIP29.2■■■□□ 2.26
C11orf49-210ENST00000526827 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
C11orf49-210ENST00000526827 BICRAQ9NZM4 1560 aa28.81■■■□□ 2.2
C11orf49-210ENST00000526827 MYO15BQ96JP2 1530 aa28.65■■■□□ 2.18
C11orf49-210ENST00000526827 ZCCHC6Q5VYS8 1495 aaKnown RBP28.33■■■□□ 2.13
C11orf49-210ENST00000526827 CC2D2AQ9P2K1 1620 aa28.25■■■□□ 2.11
C11orf49-210ENST00000526827 SCRIBQ14160 1630 aa28.22■■■□□ 2.11
C11orf49-210ENST00000526827 DCAF1Q9Y4B6 1507 aa28.2■■■□□ 2.1
C11orf49-210ENST00000526827 CECR2Q9BXF3 1484 aa28.18■■■□□ 2.1
C11orf49-210ENST00000526827 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
C11orf49-210ENST00000526827 EIF4G1Q04637 1599 aaKnown RBP28.07■■■□□ 2.08
C11orf49-210ENST00000526827 DNAJC5Q9H3Z4 198 aa27.46■■□□□ 1.99
C11orf49-210ENST00000526827 NCAPD3P42695 1498 aa27.03■■□□□ 1.92
C11orf49-210ENST00000526827 CUX2O14529 1486 aa26.96■■□□□ 1.91
C11orf49-210ENST00000526827 ERCC6Q03468 1493 aa26.96■■□□□ 1.91
C11orf49-210ENST00000526827 ATAD2BQ9ULI0 1458 aa26.94■■□□□ 1.9
C11orf49-210ENST00000526827 NESP48681 1621 aa26.87■■□□□ 1.89
C11orf49-210ENST00000526827 SMARCA4P51532 1647 aa26.83■■□□□ 1.89
C11orf49-210ENST00000526827 SMARCA2P51531 1590 aa26.76■■□□□ 1.87
C11orf49-210ENST00000526827 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
C11orf49-210ENST00000526827 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
C11orf49-210ENST00000526827 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
C11orf49-210ENST00000526827 THOC2Q8NI27 1593 aaKnown RBP26.54■■□□□ 1.84
C11orf49-210ENST00000526827 PEG3Q9GZU2 1588 aa26.51■■□□□ 1.83
C11orf49-210ENST00000526827 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
C11orf49-210ENST00000526827 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
C11orf49-210ENST00000526827 LAMC3Q9Y6N6 1575 aa26.45■■□□□ 1.82
C11orf49-210ENST00000526827 PDS5BQ9NTI5 1447 aa26.3■■□□□ 1.8
C11orf49-210ENST00000526827 WIZO95785 1651 aa26.22■■□□□ 1.79
C11orf49-210ENST00000526827 CADPSQ9ULU8 1353 aa26.21■■□□□ 1.79
C11orf49-210ENST00000526827 TRIM41Q8WV44 630 aa26.2■■□□□ 1.78
C11orf49-210ENST00000526827 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
C11orf49-210ENST00000526827 WDR62O43379 1518 aa26.06■■□□□ 1.76
C11orf49-210ENST00000526827 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
C11orf49-210ENST00000526827 FANCD2Q9BXW9 1451 aa25.92■■□□□ 1.74
C11orf49-210ENST00000526827 CFTRP13569 1480 aa25.84■■□□□ 1.73
C11orf49-210ENST00000526827 RSF1Q96T23 1441 aaPredicted RBP25.81■■□□□ 1.72
C11orf49-210ENST00000526827 OSCARQ8IYS5 282 aa25.79■■□□□ 1.72
C11orf49-210ENST00000526827 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
C11orf49-210ENST00000526827 TOP2AP11388 1531 aaKnown RBP25.72■■□□□ 1.71
C11orf49-210ENST00000526827 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
C11orf49-210ENST00000526827 ZNF608Q9ULD9 1512 aaPredicted RBP25.56■■□□□ 1.68
C11orf49-210ENST00000526827 CCDC88BA6NC98 1476 aa25.53■■□□□ 1.68
C11orf49-210ENST00000526827 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
C11orf49-210ENST00000526827 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
C11orf49-210ENST00000526827 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
C11orf49-210ENST00000526827 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
C11orf49-210ENST00000526827 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
C11orf49-210ENST00000526827 ARHGEF11O15085 1522 aa25.36■■□□□ 1.65
C11orf49-210ENST00000526827 EIF4G3O43432 1585 aaKnown RBP25.32■■□□□ 1.64
C11orf49-210ENST00000526827 AQRO60306 1485 aaKnown RBP eCLIP25.29■■□□□ 1.64
C11orf49-210ENST00000526827 CYB5RLQ6IPT4 315 aa25.29■■□□□ 1.64
C11orf49-210ENST00000526827 CHD1O14646 1710 aa25.26■■□□□ 1.63
C11orf49-210ENST00000526827 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
C11orf49-210ENST00000526827 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
C11orf49-210ENST00000526827 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
C11orf49-210ENST00000526827 FBLN2P98095 1184 aa25.2■■□□□ 1.62
C11orf49-210ENST00000526827 RAD54L2Q9Y4B4 1467 aa25.14■■□□□ 1.61
C11orf49-210ENST00000526827 POLA1P09884 1462 aaPredicted RBP25.13■■□□□ 1.61
C11orf49-210ENST00000526827 ARAP1Q96P48 1450 aa25.11■■□□□ 1.61
C11orf49-210ENST00000526827 TRHP20396 242 aaPredicted RBP25.09■■□□□ 1.61
C11orf49-210ENST00000526827 TDRD9Q8NDG6 1382 aaKnown RBP25.08■■□□□ 1.61
C11orf49-210ENST00000526827 SOGA1O94964 1423 aa25.03■■□□□ 1.6
C11orf49-210ENST00000526827 SNAPC4Q5SXM2 1469 aa24.95■■□□□ 1.58
C11orf49-210ENST00000526827 FGD5Q6ZNL6 1462 aa24.94■■□□□ 1.58
C11orf49-210ENST00000526827 CUX1P39880 1505 aa24.9■■□□□ 1.58
C11orf49-210ENST00000526827 CHMP7Q8WUX9 453 aaPredicted RBP24.89■■□□□ 1.58
C11orf49-210ENST00000526827 CLASP1Q7Z460 1538 aa24.88■■□□□ 1.57
C11orf49-210ENST00000526827 SYNJ1O43426 1573 aa24.79■■□□□ 1.56
C11orf49-210ENST00000526827 GRIN2BQ13224 1484 aa24.78■■□□□ 1.56
C11orf49-210ENST00000526827 MAGI1Q96QZ7 1491 aaPredicted RBP24.78■■□□□ 1.56
C11orf49-210ENST00000526827 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
C11orf49-210ENST00000526827 SYNJ2O15056 1496 aa24.74■■□□□ 1.55
C11orf49-210ENST00000526827 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
C11orf49-210ENST00000526827 GAPVD1Q14C86 1478 aa24.69■■□□□ 1.54
C11orf49-210ENST00000526827 ERCC6L2Q5T890 1561 aa24.61■■□□□ 1.53
C11orf49-210ENST00000526827 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
C11orf49-210ENST00000526827 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
C11orf49-210ENST00000526827 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
C11orf49-210ENST00000526827 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
C11orf49-210ENST00000526827 GRIN2AQ12879 1464 aa24.49■■□□□ 1.51
C11orf49-210ENST00000526827 CEP170Q5SW79 1584 aa24.48■■□□□ 1.51
C11orf49-210ENST00000526827 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
C11orf49-210ENST00000526827 WRNQ14191 1432 aaPredicted RBP eCLIP24.42■■□□□ 1.5
C11orf49-210ENST00000526827 NUP160Q12769 1436 aa24.4■■□□□ 1.5
C11orf49-210ENST00000526827 BIVM-ERCC5R4GMW8 1640 aa24.36■■□□□ 1.49
C11orf49-210ENST00000526827 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
C11orf49-210ENST00000526827 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
C11orf49-210ENST00000526827 FHAD1B1AJZ9 1412 aa24.33■■□□□ 1.49
C11orf49-210ENST00000526827 KIF13AQ9H1H9 1805 aa24.31■■□□□ 1.48
C11orf49-210ENST00000526827 PRG4Q92954 1404 aaPredicted RBP24.26■■□□□ 1.47
C11orf49-210ENST00000526827 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
C11orf49-210ENST00000526827 JPH4Q96JJ6 628 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms