RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 NISCHQ9Y2I1 1504 aa35.38■■■■□ 3.25
SSRP1-203ENST00000526696 ABCC9O60706 1549 aa33.11■■■□□ 2.89
SSRP1-203ENST00000526696 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
SSRP1-203ENST00000526696 DNAJC5BQ9UF47 199 aa32.02■■■□□ 2.72
SSRP1-203ENST00000526696 RB1CC1Q8TDY2 1594 aa31.01■■■□□ 2.56
SSRP1-203ENST00000526696 PABPN1Q86U42 306 aaKnown RBP eCLIP30.7■■■□□ 2.51
SSRP1-203ENST00000526696 NACADO15069 1562 aa30.58■■■□□ 2.49
SSRP1-203ENST00000526696 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
SSRP1-203ENST00000526696 BICRAQ9NZM4 1560 aa30.28■■■□□ 2.44
SSRP1-203ENST00000526696 DCAF8L2P0C7V8 631 aa30.22■■■□□ 2.43
SSRP1-203ENST00000526696 DNAJC5Q9H3Z4 198 aa29.98■■■□□ 2.39
SSRP1-203ENST00000526696 CECR2Q9BXF3 1484 aa29.9■■■□□ 2.38
SSRP1-203ENST00000526696 CC2D2AQ9P2K1 1620 aa29.86■■■□□ 2.37
SSRP1-203ENST00000526696 MYO15BQ96JP2 1530 aa29.85■■■□□ 2.37
SSRP1-203ENST00000526696 SHROOM4Q9ULL8 1493 aa29.61■■■□□ 2.33
SSRP1-203ENST00000526696 EIF4G1Q04637 1599 aaKnown RBP29.55■■■□□ 2.32
SSRP1-203ENST00000526696 SCRIBQ14160 1630 aa29.25■■■□□ 2.27
SSRP1-203ENST00000526696 DCAF1Q9Y4B6 1507 aa29.14■■■□□ 2.25
SSRP1-203ENST00000526696 ZCCHC6Q5VYS8 1495 aaKnown RBP29.13■■■□□ 2.25
SSRP1-203ENST00000526696 CUX2O14529 1486 aa28.85■■■□□ 2.21
SSRP1-203ENST00000526696 ERCC6Q03468 1493 aa28.56■■■□□ 2.16
SSRP1-203ENST00000526696 NCAPD3P42695 1498 aa28.29■■■□□ 2.12
SSRP1-203ENST00000526696 TRIM41Q8WV44 630 aa28.24■■■□□ 2.11
SSRP1-203ENST00000526696 NESP48681 1621 aa28.21■■■□□ 2.11
SSRP1-203ENST00000526696 THOC2Q8NI27 1593 aaKnown RBP28.09■■■□□ 2.09
SSRP1-203ENST00000526696 ATAD2BQ9ULI0 1458 aa28.08■■■□□ 2.09
SSRP1-203ENST00000526696 HMGXB3Q12766 1538 aa27.97■■■□□ 2.07
SSRP1-203ENST00000526696 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
SSRP1-203ENST00000526696 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
SSRP1-203ENST00000526696 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
SSRP1-203ENST00000526696 LAMC3Q9Y6N6 1575 aa27.75■■■□□ 2.03
SSRP1-203ENST00000526696 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.03
SSRP1-203ENST00000526696 PDS5BQ9NTI5 1447 aa27.61■■■□□ 2.01
SSRP1-203ENST00000526696 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
SSRP1-203ENST00000526696 BAZ1AQ9NRL2 1556 aaPredicted RBP27.49■■□□□ 1.99
SSRP1-203ENST00000526696 MRC2Q9UBG0 1479 aa27.47■■□□□ 1.99
SSRP1-203ENST00000526696 WDR62O43379 1518 aa27.46■■□□□ 1.99
SSRP1-203ENST00000526696 OSCARQ8IYS5 282 aa27.37■■□□□ 1.97
SSRP1-203ENST00000526696 CADPSQ9ULU8 1353 aa27.36■■□□□ 1.97
SSRP1-203ENST00000526696 MROH2BQ7Z745 1585 aa27.3■■□□□ 1.96
SSRP1-203ENST00000526696 RIMBP3CA6NJZ7 1639 aa27.19■■□□□ 1.94
SSRP1-203ENST00000526696 RIMBP3BA6NNM3 1639 aa27.19■■□□□ 1.94
SSRP1-203ENST00000526696 RIMBP3Q9UFD9 1639 aa27.19■■□□□ 1.94
SSRP1-203ENST00000526696 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
SSRP1-203ENST00000526696 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
SSRP1-203ENST00000526696 ARHGEF11O15085 1522 aa27■■□□□ 1.91
SSRP1-203ENST00000526696 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.91
SSRP1-203ENST00000526696 WIZO95785 1651 aa26.92■■□□□ 1.9
SSRP1-203ENST00000526696 CFTRP13569 1480 aa26.87■■□□□ 1.89
SSRP1-203ENST00000526696 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
SSRP1-203ENST00000526696 TRHP20396 242 aaPredicted RBP26.79■■□□□ 1.88
SSRP1-203ENST00000526696 ZNF608Q9ULD9 1512 aaPredicted RBP26.79■■□□□ 1.88
SSRP1-203ENST00000526696 ARAP1Q96P48 1450 aa26.7■■□□□ 1.87
SSRP1-203ENST00000526696 AEBP2Q6ZN18 517 aaPredicted RBP26.66■■□□□ 1.86
SSRP1-203ENST00000526696 IFT140Q96RY7 1462 aa26.64■■□□□ 1.86
SSRP1-203ENST00000526696 CHD1O14646 1710 aa26.54■■□□□ 1.84
SSRP1-203ENST00000526696 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
SSRP1-203ENST00000526696 PRDM2Q13029 1718 aa26.51■■□□□ 1.83
SSRP1-203ENST00000526696 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
SSRP1-203ENST00000526696 TOP2AP11388 1531 aaKnown RBP26.46■■□□□ 1.83
SSRP1-203ENST00000526696 TOPBP1Q92547 1522 aa26.46■■□□□ 1.83
SSRP1-203ENST00000526696 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.826e-8■■■□□ 16
SSRP1-203ENST00000526696 FBLN2P98095 1184 aa26.34■■□□□ 1.81
SSRP1-203ENST00000526696 TARBP1Q13395 1621 aaKnown RBP26.33■■□□□ 1.81
SSRP1-203ENST00000526696 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
SSRP1-203ENST00000526696 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
SSRP1-203ENST00000526696 CLASP1Q7Z460 1538 aa26.22■■□□□ 1.79
SSRP1-203ENST00000526696 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
SSRP1-203ENST00000526696 POLA1P09884 1462 aaPredicted RBP26.14■■□□□ 1.78
SSRP1-203ENST00000526696 RAD54L2Q9Y4B4 1467 aa26.1■■□□□ 1.77
SSRP1-203ENST00000526696 TDRD9Q8NDG6 1382 aaKnown RBP26.08■■□□□ 1.77
SSRP1-203ENST00000526696 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
SSRP1-203ENST00000526696 SYNJ1O43426 1573 aa26.03■■□□□ 1.76
SSRP1-203ENST00000526696 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
SSRP1-203ENST00000526696 CHMP7Q8WUX9 453 aaPredicted RBP25.98■■□□□ 1.75
SSRP1-203ENST00000526696 SOGA1O94964 1423 aa25.97■■□□□ 1.75
SSRP1-203ENST00000526696 MAGI1Q96QZ7 1491 aaPredicted RBP25.92■■□□□ 1.74
SSRP1-203ENST00000526696 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
SSRP1-203ENST00000526696 SYNJ2O15056 1496 aa25.87■■□□□ 1.73
SSRP1-203ENST00000526696 GRIN2BQ13224 1484 aa25.84■■□□□ 1.73
SSRP1-203ENST00000526696 FGD5Q6ZNL6 1462 aa25.83■■□□□ 1.73
SSRP1-203ENST00000526696 ERCC6L2Q5T890 1561 aa25.81■■□□□ 1.72
SSRP1-203ENST00000526696 ILDR1Q86SU0 546 aaPredicted RBP25.76■■□□□ 1.71
SSRP1-203ENST00000526696 KIF13AQ9H1H9 1805 aa25.73■■□□□ 1.71
SSRP1-203ENST00000526696 PBRM1Q86U86 1689 aa25.7■■□□□ 1.7
SSRP1-203ENST00000526696 CUX1P39880 1505 aa25.69■■□□□ 1.7
SSRP1-203ENST00000526696 CEP170Q5SW79 1584 aa25.6■■□□□ 1.69
SSRP1-203ENST00000526696 KDM4FA0A1W2PPD8 638 aa25.59■■□□□ 1.69
SSRP1-203ENST00000526696 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
SSRP1-203ENST00000526696 GRIN2AQ12879 1464 aa25.53■■□□□ 1.68
SSRP1-203ENST00000526696 NUP160Q12769 1436 aa25.5■■□□□ 1.67
SSRP1-203ENST00000526696 SHROOM2Q13796 1616 aa25.5■■□□□ 1.67
SSRP1-203ENST00000526696 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
SSRP1-203ENST00000526696 ABCC10Q5T3U5 1492 aa25.41■■□□□ 1.66
SSRP1-203ENST00000526696 ADAMTS12P58397 1594 aa25.41■■□□□ 1.66
SSRP1-203ENST00000526696 FAM69CQ0P6D2 419 aa25.41■■□□□ 1.66
SSRP1-203ENST00000526696 DIP2BQ9P265 1576 aa25.33■■□□□ 1.65
SSRP1-203ENST00000526696 KDM6BO15054 1643 aa25.33■■□□□ 1.65
SSRP1-203ENST00000526696 PRG4Q92954 1404 aaPredicted RBP25.31■■□□□ 1.64
SSRP1-203ENST00000526696 MAPKBP1O60336 1514 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms