RNA–Protein interactions for RNA: ENST00000526673.1

SOX6-207, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 534 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-207ENST00000526673 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.06
SOX6-207ENST00000526673 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
SOX6-207ENST00000526673 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
SOX6-207ENST00000526673 DCAF1Q9Y4B6 1507 aa18.15■□□□□ 0.5
SOX6-207ENST00000526673 MYO15BQ96JP2 1530 aa17.97■□□□□ 0.47
SOX6-207ENST00000526673 NACADO15069 1562 aa17.69■□□□□ 0.42
SOX6-207ENST00000526673 ABCC9O60706 1549 aa17.6■□□□□ 0.41
SOX6-207ENST00000526673 RB1CC1Q8TDY2 1594 aa17.48■□□□□ 0.39
SOX6-207ENST00000526673 DCAF8L2P0C7V8 631 aa17.33■□□□□ 0.36
SOX6-207ENST00000526673 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
SOX6-207ENST00000526673 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
SOX6-207ENST00000526673 UNC13AQ9UPW8 1703 aa17.17■□□□□ 0.34
SOX6-207ENST00000526673 BICRAQ9NZM4 1560 aa16.95■□□□□ 0.3
SOX6-207ENST00000526673 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
SOX6-207ENST00000526673 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
SOX6-207ENST00000526673 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
SOX6-207ENST00000526673 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
SOX6-207ENST00000526673 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
SOX6-207ENST00000526673 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
SOX6-207ENST00000526673 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
SOX6-207ENST00000526673 WIZO95785 1651 aa16.54■□□□□ 0.24
SOX6-207ENST00000526673 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
SOX6-207ENST00000526673 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.22
SOX6-207ENST00000526673 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
SOX6-207ENST00000526673 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
SOX6-207ENST00000526673 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
SOX6-207ENST00000526673 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
SOX6-207ENST00000526673 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
SOX6-207ENST00000526673 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
SOX6-207ENST00000526673 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
SOX6-207ENST00000526673 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
SOX6-207ENST00000526673 CHIC1Q5VXU3 224 aa16.09■□□□□ 0.17
SOX6-207ENST00000526673 PRDM2Q13029 1718 aa16.01■□□□□ 0.15
SOX6-207ENST00000526673 CFTRP13569 1480 aa15.9■□□□□ 0.14
SOX6-207ENST00000526673 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
SOX6-207ENST00000526673 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
SOX6-207ENST00000526673 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
SOX6-207ENST00000526673 LAMC3Q9Y6N6 1575 aa15.76■□□□□ 0.11
SOX6-207ENST00000526673 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
SOX6-207ENST00000526673 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
SOX6-207ENST00000526673 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
SOX6-207ENST00000526673 SYNJ1O43426 1573 aa15.73■□□□□ 0.11
SOX6-207ENST00000526673 EEA1Q15075 1411 aa15.68■□□□□ 0.1
SOX6-207ENST00000526673 CUX1P39880 1505 aa15.61■□□□□ 0.09
SOX6-207ENST00000526673 FANCD2Q9BXW9 1451 aa15.57■□□□□ 0.08
SOX6-207ENST00000526673 DNMBPQ6XZF7 1577 aa15.54■□□□□ 0.08
SOX6-207ENST00000526673 CEP164Q9UPV0 1460 aa15.5■□□□□ 0.07
SOX6-207ENST00000526673 PDS5BQ9NTI5 1447 aa15.5■□□□□ 0.07
SOX6-207ENST00000526673 KIF21BO75037 1637 aa15.5■□□□□ 0.07
SOX6-207ENST00000526673 NESP48681 1621 aa15.49■□□□□ 0.07
SOX6-207ENST00000526673 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
SOX6-207ENST00000526673 SOGA1O94964 1423 aa15.46■□□□□ 0.07
SOX6-207ENST00000526673 TOPBP1Q92547 1522 aa15.44■□□□□ 0.06
SOX6-207ENST00000526673 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
SOX6-207ENST00000526673 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
SOX6-207ENST00000526673 ERICH3Q5RHP9 1530 aa15.4■□□□□ 0.06
SOX6-207ENST00000526673 URB2Q14146 1524 aaKnown RBP15.39■□□□□ 0.05
SOX6-207ENST00000526673 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
SOX6-207ENST00000526673 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
SOX6-207ENST00000526673 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
SOX6-207ENST00000526673 KIF27Q86VH2 1401 aa15.36■□□□□ 0.05
SOX6-207ENST00000526673 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
SOX6-207ENST00000526673 GOLGA3Q08378 1498 aa15.35■□□□□ 0.05
SOX6-207ENST00000526673 PRXQ9BXM0 1461 aa15.34■□□□□ 0.05
SOX6-207ENST00000526673 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
SOX6-207ENST00000526673 WDR62O43379 1518 aa15.33■□□□□ 0.05
SOX6-207ENST00000526673 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.04
SOX6-207ENST00000526673 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
SOX6-207ENST00000526673 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
SOX6-207ENST00000526673 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
SOX6-207ENST00000526673 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
SOX6-207ENST00000526673 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
SOX6-207ENST00000526673 CUL7Q14999 1698 aa15.27■□□□□ 0.03
SOX6-207ENST00000526673 CUX2O14529 1486 aa15.25■□□□□ 0.03
SOX6-207ENST00000526673 FAM9AQ8IZU1 332 aaPredicted RBP15.22■□□□□ 0.03
SOX6-207ENST00000526673 RAPGEF2Q9Y4G8 1499 aa15.2■□□□□ 0.02
SOX6-207ENST00000526673 IGF1RP08069 1367 aa15.18■□□□□ 0.02
SOX6-207ENST00000526673 RAD54L2Q9Y4B4 1467 aa15.18■□□□□ 0.02
SOX6-207ENST00000526673 CEP162Q5TB80 1403 aa15.17■□□□□ 0.02
SOX6-207ENST00000526673 IFT140Q96RY7 1462 aa15.16■□□□□ 0.02
SOX6-207ENST00000526673 PBRM1Q86U86 1689 aa15.15■□□□□ 0.02
SOX6-207ENST00000526673 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
SOX6-207ENST00000526673 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
SOX6-207ENST00000526673 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
SOX6-207ENST00000526673 CARMIL1Q5VZK9 1371 aa15.08■□□□□ 0
SOX6-207ENST00000526673 ADAMTS12P58397 1594 aa15.06■□□□□ 0
SOX6-207ENST00000526673 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
SOX6-207ENST00000526673 GRIN2BQ13224 1484 aa15.02■□□□□ -0
SOX6-207ENST00000526673 CLIP1P30622 1438 aa15.02■□□□□ -0
SOX6-207ENST00000526673 EFCAB5A4FU69 1503 aa15□□□□□ -0.01
SOX6-207ENST00000526673 UBTFP17480 764 aaKnown RBP14.99□□□□□ -0.01
SOX6-207ENST00000526673 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
SOX6-207ENST00000526673 VPS8Q8N3P4 1428 aa14.98□□□□□ -0.01
SOX6-207ENST00000526673 TDRD9Q8NDG6 1382 aaKnown RBP14.97□□□□□ -0.01
SOX6-207ENST00000526673 MAGI1Q96QZ7 1491 aaPredicted RBP14.96□□□□□ -0.01
SOX6-207ENST00000526673 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
SOX6-207ENST00000526673 ZNF608Q9ULD9 1512 aaPredicted RBP14.94□□□□□ -0.02
SOX6-207ENST00000526673 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
SOX6-207ENST00000526673 SAMD9Q5K651 1589 aa14.94□□□□□ -0.02
SOX6-207ENST00000526673 AQRO60306 1485 aaKnown RBP eCLIP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms