RNA–Protein interactions for RNA: ENST00000526547.2

PPT1-206, Transcript of palmitoyl-protein thioesterase 1, humanhuman

TSL 5

Gene PPT1, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-206ENST00000526547 NISCHQ9Y2I1 1504 aa41.49■■■■■ 4.23
PPT1-206ENST00000526547 CCDC180Q9P1Z9 1646 aa37.11■■■■□ 3.53
PPT1-206ENST00000526547 ABCC9O60706 1549 aa36.36■■■■□ 3.41
PPT1-206ENST00000526547 RB1CC1Q8TDY2 1594 aa34.91■■■■□ 3.18
PPT1-206ENST00000526547 NACADO15069 1562 aa34.8■■■■□ 3.16
PPT1-206ENST00000526547 ZCCHC6Q5VYS8 1495 aaKnown RBP34.58■■■■□ 3.13
PPT1-206ENST00000526547 MYO15BQ96JP2 1530 aa34.51■■■■□ 3.12
PPT1-206ENST00000526547 DCAF8L2P0C7V8 631 aa34.48■■■■□ 3.11
PPT1-206ENST00000526547 UNC13AQ9UPW8 1703 aa34.35■■■■□ 3.09
PPT1-206ENST00000526547 DCAF1Q9Y4B6 1507 aa34.32■■■■□ 3.08
PPT1-206ENST00000526547 BICRAQ9NZM4 1560 aa33.95■■■■□ 3.03
PPT1-206ENST00000526547 SCRIBQ14160 1630 aa33.82■■■■□ 3.01
PPT1-206ENST00000526547 PABPN1Q86U42 306 aaKnown RBP eCLIP33.81■■■■□ 3
PPT1-206ENST00000526547 SHROOM4Q9ULL8 1493 aa33.48■■■□□ 2.95
PPT1-206ENST00000526547 DNAJC5BQ9UF47 199 aa33.44■■■□□ 2.94
PPT1-206ENST00000526547 EIF4G1Q04637 1599 aaKnown RBP33.03■■■□□ 2.88
PPT1-206ENST00000526547 CC2D2AQ9P2K1 1620 aa32.95■■■□□ 2.87
PPT1-206ENST00000526547 CECR2Q9BXF3 1484 aa32.66■■■□□ 2.82
PPT1-206ENST00000526547 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
PPT1-206ENST00000526547 BAZ1AQ9NRL2 1556 aaPredicted RBP32.18■■■□□ 2.74
PPT1-206ENST00000526547 ATAD2BQ9ULI0 1458 aa32.09■■■□□ 2.73
PPT1-206ENST00000526547 SMARCA2P51531 1590 aa32.06■■■□□ 2.72
PPT1-206ENST00000526547 NCAPD3P42695 1498 aa32.05■■■□□ 2.72
PPT1-206ENST00000526547 MROH2BQ7Z745 1585 aa32.01■■■□□ 2.71
PPT1-206ENST00000526547 HMGXB3Q12766 1538 aa32■■■□□ 2.71
PPT1-206ENST00000526547 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
PPT1-206ENST00000526547 BAZ1BQ9UIG0 1483 aaKnown RBP31.82■■■□□ 2.68
PPT1-206ENST00000526547 WIZO95785 1651 aa31.71■■■□□ 2.67
PPT1-206ENST00000526547 RSF1Q96T23 1441 aaPredicted RBP31.49■■■□□ 2.63
PPT1-206ENST00000526547 NESP48681 1621 aa31.44■■■□□ 2.62
PPT1-206ENST00000526547 LAMC3Q9Y6N6 1575 aa31.33■■■□□ 2.61
PPT1-206ENST00000526547 TOP2AP11388 1531 aaKnown RBP31.33■■■□□ 2.61
PPT1-206ENST00000526547 ERCC6Q03468 1493 aa31.3■■■□□ 2.6
PPT1-206ENST00000526547 KIF21AQ7Z4S6 1674 aa31.21■■■□□ 2.59
PPT1-206ENST00000526547 THOC2Q8NI27 1593 aaKnown RBP31.13■■■□□ 2.57
PPT1-206ENST00000526547 CUX2O14529 1486 aa31.07■■■□□ 2.56
PPT1-206ENST00000526547 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
PPT1-206ENST00000526547 PDS5BQ9NTI5 1447 aa30.98■■■□□ 2.55
PPT1-206ENST00000526547 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
PPT1-206ENST00000526547 CFTRP13569 1480 aa30.91■■■□□ 2.54
PPT1-206ENST00000526547 CCDC88BA6NC98 1476 aa30.87■■■□□ 2.53
PPT1-206ENST00000526547 FANCD2Q9BXW9 1451 aa30.8■■■□□ 2.52
PPT1-206ENST00000526547 MRC2Q9UBG0 1479 aa30.79■■■□□ 2.52
PPT1-206ENST00000526547 CEP164Q9UPV0 1460 aa30.79■■■□□ 2.52
PPT1-206ENST00000526547 WDR62O43379 1518 aa30.76■■■□□ 2.51
PPT1-206ENST00000526547 URB2Q14146 1524 aaKnown RBP30.56■■■□□ 2.48
PPT1-206ENST00000526547 SUPT5HO00267 1087 aaKnown RBP30.41■■■□□ 2.46
PPT1-206ENST00000526547 TOPBP1Q92547 1522 aa30.32■■■□□ 2.44
PPT1-206ENST00000526547 DNMBPQ6XZF7 1577 aa30.3■■■□□ 2.44
PPT1-206ENST00000526547 ABCC8Q09428 1581 aa30.19■■■□□ 2.42
PPT1-206ENST00000526547 DNAJC5Q9H3Z4 198 aa30.18■■■□□ 2.42
PPT1-206ENST00000526547 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
PPT1-206ENST00000526547 TARBP1Q13395 1621 aaKnown RBP30.07■■■□□ 2.4
PPT1-206ENST00000526547 CUX1P39880 1505 aa30.06■■■□□ 2.4
PPT1-206ENST00000526547 ZNF608Q9ULD9 1512 aaPredicted RBP30.06■■■□□ 2.4
PPT1-206ENST00000526547 POLA1P09884 1462 aaPredicted RBP30.05■■■□□ 2.4
PPT1-206ENST00000526547 EIF4G3O43432 1585 aaKnown RBP30.04■■■□□ 2.4
PPT1-206ENST00000526547 FGD5Q6ZNL6 1462 aa29.95■■■□□ 2.39
PPT1-206ENST00000526547 WDR97A6NE52 1622 aa29.9■■■□□ 2.38
PPT1-206ENST00000526547 RAD54L2Q9Y4B4 1467 aa29.89■■■□□ 2.38
PPT1-206ENST00000526547 BIVM-ERCC5R4GMW8 1640 aa29.82■■■□□ 2.36
PPT1-206ENST00000526547 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.36
PPT1-206ENST00000526547 SOGA1O94964 1423 aa29.79■■■□□ 2.36
PPT1-206ENST00000526547 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
PPT1-206ENST00000526547 TOP2BQ02880 1626 aa29.75■■■□□ 2.35
PPT1-206ENST00000526547 CHD1O14646 1710 aa29.74■■■□□ 2.35
PPT1-206ENST00000526547 WRNQ14191 1432 aaPredicted RBP eCLIP29.69■■■□□ 2.34
PPT1-206ENST00000526547 PBRM1Q86U86 1689 aa29.69■■■□□ 2.34
PPT1-206ENST00000526547 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
PPT1-206ENST00000526547 ABCA5Q8WWZ7 1642 aa29.66■■■□□ 2.34
PPT1-206ENST00000526547 ABCA10Q8WWZ4 1543 aa29.63■■■□□ 2.33
PPT1-206ENST00000526547 SNAPC4Q5SXM2 1469 aa29.59■■■□□ 2.33
PPT1-206ENST00000526547 OSCARQ8IYS5 282 aa29.55■■■□□ 2.32
PPT1-206ENST00000526547 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
PPT1-206ENST00000526547 GAPVD1Q14C86 1478 aa29.51■■■□□ 2.31
PPT1-206ENST00000526547 MAGI1Q96QZ7 1491 aaPredicted RBP29.51■■■□□ 2.31
PPT1-206ENST00000526547 RIMBP3CA6NJZ7 1639 aa29.41■■■□□ 2.3
PPT1-206ENST00000526547 RIMBP3BA6NNM3 1639 aa29.41■■■□□ 2.3
PPT1-206ENST00000526547 RIMBP3Q9UFD9 1639 aa29.41■■■□□ 2.3
PPT1-206ENST00000526547 SYNJ2O15056 1496 aa29.38■■■□□ 2.29
PPT1-206ENST00000526547 ADAMTS12P58397 1594 aa29.38■■■□□ 2.29
PPT1-206ENST00000526547 FBLN2P98095 1184 aa29.34■■■□□ 2.29
PPT1-206ENST00000526547 CLASP1Q7Z460 1538 aa29.34■■■□□ 2.29
PPT1-206ENST00000526547 ARHGEF11O15085 1522 aa29.32■■■□□ 2.28
PPT1-206ENST00000526547 ERICH3Q5RHP9 1530 aa29.28■■■□□ 2.28
PPT1-206ENST00000526547 CHMP7Q8WUX9 453 aaPredicted RBP29.21■■■□□ 2.27
PPT1-206ENST00000526547 GRIN2AQ12879 1464 aa29.21■■■□□ 2.27
PPT1-206ENST00000526547 CEP170Q5SW79 1584 aa29.15■■■□□ 2.26
PPT1-206ENST00000526547 FHAD1B1AJZ9 1412 aa29.14■■■□□ 2.26
PPT1-206ENST00000526547 TRIM41Q8WV44 630 aa29.14■■■□□ 2.26
PPT1-206ENST00000526547 ARAP1Q96P48 1450 aa29.08■■■□□ 2.25
PPT1-206ENST00000526547 NUP160Q12769 1436 aa29.07■■■□□ 2.24
PPT1-206ENST00000526547 CUL7Q14999 1698 aa29.05■■■□□ 2.24
PPT1-206ENST00000526547 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
PPT1-206ENST00000526547 SHROOM2Q13796 1616 aa28.98■■■□□ 2.23
PPT1-206ENST00000526547 RUSC2Q8N2Y8 1516 aa28.97■■■□□ 2.23
PPT1-206ENST00000526547 ERCC6L2Q5T890 1561 aa28.93■■■□□ 2.22
PPT1-206ENST00000526547 IGF1RP08069 1367 aa28.91■■■□□ 2.22
PPT1-206ENST00000526547 CYB5RLQ6IPT4 315 aa28.84■■■□□ 2.21
PPT1-206ENST00000526547 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms