RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
AMBRA1-204ENST00000526545 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
AMBRA1-204ENST00000526545 ABCC9O60706 1549 aa24.63■■□□□ 1.53
AMBRA1-204ENST00000526545 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
AMBRA1-204ENST00000526545 NACADO15069 1562 aa23.41■■□□□ 1.34
AMBRA1-204ENST00000526545 DCAF8L2P0C7V8 631 aa23.28■■□□□ 1.32
AMBRA1-204ENST00000526545 MYO15BQ96JP2 1530 aa23.15■■□□□ 1.3
AMBRA1-204ENST00000526545 DNAJC5BQ9UF47 199 aa23.04■■□□□ 1.28
AMBRA1-204ENST00000526545 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
AMBRA1-204ENST00000526545 UNC13AQ9UPW8 1703 aa22.91■■□□□ 1.26
AMBRA1-204ENST00000526545 ZCCHC6Q5VYS8 1495 aaKnown RBP22.89■■□□□ 1.25
AMBRA1-204ENST00000526545 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
AMBRA1-204ENST00000526545 BICRAQ9NZM4 1560 aa22.8■■□□□ 1.24
AMBRA1-204ENST00000526545 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
AMBRA1-204ENST00000526545 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
AMBRA1-204ENST00000526545 CC2D2AQ9P2K1 1620 aa22.27■■□□□ 1.16
AMBRA1-204ENST00000526545 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
AMBRA1-204ENST00000526545 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
AMBRA1-204ENST00000526545 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
AMBRA1-204ENST00000526545 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
AMBRA1-204ENST00000526545 SMARCA4P51532 1647 aa21.5■■□□□ 1.03
AMBRA1-204ENST00000526545 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
AMBRA1-204ENST00000526545 BAZ1AQ9NRL2 1556 aaPredicted RBP21.45■■□□□ 1.02
AMBRA1-204ENST00000526545 HMGXB3Q12766 1538 aa21.45■■□□□ 1.02
AMBRA1-204ENST00000526545 PEG3Q9GZU2 1588 aa21.34■■□□□ 1.01
AMBRA1-204ENST00000526545 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
AMBRA1-204ENST00000526545 ERCC6Q03468 1493 aa21.3■■□□□ 1
AMBRA1-204ENST00000526545 CUX2O14529 1486 aa21.26■□□□□ 0.99
AMBRA1-204ENST00000526545 MROH2BQ7Z745 1585 aa21.25■□□□□ 0.99
AMBRA1-204ENST00000526545 DNAJC5Q9H3Z4 198 aa21.17■□□□□ 0.98
AMBRA1-204ENST00000526545 NESP48681 1621 aa21.17■□□□□ 0.98
AMBRA1-204ENST00000526545 LAMC3Q9Y6N6 1575 aa21.1■□□□□ 0.97
AMBRA1-204ENST00000526545 PDS5BQ9NTI5 1447 aa21.01■□□□□ 0.95
AMBRA1-204ENST00000526545 WIZO95785 1651 aa20.99■□□□□ 0.95
AMBRA1-204ENST00000526545 CADPSQ9ULU8 1353 aa20.97■□□□□ 0.95
AMBRA1-204ENST00000526545 THOC2Q8NI27 1593 aaKnown RBP20.94■□□□□ 0.94
AMBRA1-204ENST00000526545 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
AMBRA1-204ENST00000526545 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
AMBRA1-204ENST00000526545 MRC2Q9UBG0 1479 aa20.77■□□□□ 0.92
AMBRA1-204ENST00000526545 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
AMBRA1-204ENST00000526545 CFTRP13569 1480 aa20.73■□□□□ 0.91
AMBRA1-204ENST00000526545 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
AMBRA1-204ENST00000526545 WDR62O43379 1518 aa20.71■□□□□ 0.91
AMBRA1-204ENST00000526545 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
AMBRA1-204ENST00000526545 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
AMBRA1-204ENST00000526545 URB2Q14146 1524 aaKnown RBP20.49■□□□□ 0.87
AMBRA1-204ENST00000526545 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
AMBRA1-204ENST00000526545 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
AMBRA1-204ENST00000526545 OSCARQ8IYS5 282 aa20.33■□□□□ 0.85
AMBRA1-204ENST00000526545 IFT140Q96RY7 1462 aa20.31■□□□□ 0.84
AMBRA1-204ENST00000526545 TOPBP1Q92547 1522 aa20.3■□□□□ 0.84
AMBRA1-204ENST00000526545 DNMBPQ6XZF7 1577 aa20.24■□□□□ 0.83
AMBRA1-204ENST00000526545 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
AMBRA1-204ENST00000526545 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
AMBRA1-204ENST00000526545 TARBP1Q13395 1621 aaKnown RBP20.11■□□□□ 0.81
AMBRA1-204ENST00000526545 EIF4G3O43432 1585 aaKnown RBP20.11■□□□□ 0.81
AMBRA1-204ENST00000526545 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
AMBRA1-204ENST00000526545 AQRO60306 1485 aaKnown RBP eCLIP20.06■□□□□ 0.8
AMBRA1-204ENST00000526545 SOGA1O94964 1423 aa20.04■□□□□ 0.8
AMBRA1-204ENST00000526545 RAD54L2Q9Y4B4 1467 aa20■□□□□ 0.79
AMBRA1-204ENST00000526545 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
AMBRA1-204ENST00000526545 FGD5Q6ZNL6 1462 aa19.98■□□□□ 0.79
AMBRA1-204ENST00000526545 RIMBP3CA6NJZ7 1639 aa19.97■□□□□ 0.79
AMBRA1-204ENST00000526545 RIMBP3BA6NNM3 1639 aa19.97■□□□□ 0.79
AMBRA1-204ENST00000526545 RIMBP3Q9UFD9 1639 aa19.97■□□□□ 0.79
AMBRA1-204ENST00000526545 CUX1P39880 1505 aa19.97■□□□□ 0.79
AMBRA1-204ENST00000526545 TDRD9Q8NDG6 1382 aaKnown RBP19.96■□□□□ 0.79
AMBRA1-204ENST00000526545 WDR97A6NE52 1622 aa19.96■□□□□ 0.79
AMBRA1-204ENST00000526545 FBLN2P98095 1184 aa19.94■□□□□ 0.78
AMBRA1-204ENST00000526545 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
AMBRA1-204ENST00000526545 CHD1O14646 1710 aa19.91■□□□□ 0.78
AMBRA1-204ENST00000526545 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
AMBRA1-204ENST00000526545 SNAPC4Q5SXM2 1469 aa19.85■□□□□ 0.77
AMBRA1-204ENST00000526545 MAGI1Q96QZ7 1491 aaPredicted RBP19.85■□□□□ 0.77
AMBRA1-204ENST00000526545 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
AMBRA1-204ENST00000526545 CYB5RLQ6IPT4 315 aa19.81■□□□□ 0.76
AMBRA1-204ENST00000526545 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
AMBRA1-204ENST00000526545 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
AMBRA1-204ENST00000526545 SYNJ2O15056 1496 aa19.78■□□□□ 0.76
AMBRA1-204ENST00000526545 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
AMBRA1-204ENST00000526545 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
AMBRA1-204ENST00000526545 CLASP1Q7Z460 1538 aa19.74■□□□□ 0.75
AMBRA1-204ENST00000526545 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
AMBRA1-204ENST00000526545 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
AMBRA1-204ENST00000526545 ABCA5Q8WWZ7 1642 aa19.71■□□□□ 0.75
AMBRA1-204ENST00000526545 TOP2BQ02880 1626 aa19.69■□□□□ 0.74
AMBRA1-204ENST00000526545 BIVM-ERCC5R4GMW8 1640 aa19.67■□□□□ 0.74
AMBRA1-204ENST00000526545 GRIN2AQ12879 1464 aa19.58■□□□□ 0.72
AMBRA1-204ENST00000526545 TRHP20396 242 aaPredicted RBP19.57■□□□□ 0.72
AMBRA1-204ENST00000526545 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
AMBRA1-204ENST00000526545 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
AMBRA1-204ENST00000526545 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
AMBRA1-204ENST00000526545 NUP160Q12769 1436 aa19.51■□□□□ 0.71
AMBRA1-204ENST00000526545 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
AMBRA1-204ENST00000526545 SHROOM2Q13796 1616 aa19.4■□□□□ 0.7
AMBRA1-204ENST00000526545 ERCC6L2Q5T890 1561 aa19.39■□□□□ 0.69
AMBRA1-204ENST00000526545 JPH4Q96JJ6 628 aa19.36■□□□□ 0.69
AMBRA1-204ENST00000526545 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
AMBRA1-204ENST00000526545 PRG4Q92954 1404 aaPredicted RBP19.33■□□□□ 0.68
AMBRA1-204ENST00000526545 IGF1RP08069 1367 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms