RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 NISCHQ9Y2I1 1504 aa45.64■■■■■ 4.9
PPP1CA-204ENST00000526510 CCDC180Q9P1Z9 1646 aa39.94■■■■□ 3.98
PPP1CA-204ENST00000526510 ZCCHC6Q5VYS8 1495 aaKnown RBP38.31■■■■□ 3.72
PPP1CA-204ENST00000526510 ABCC9O60706 1549 aa37.84■■■■□ 3.65
PPP1CA-204ENST00000526510 DCAF1Q9Y4B6 1507 aa37.73■■■■□ 3.63
PPP1CA-204ENST00000526510 DCAF8L2P0C7V8 631 aa37.62■■■■□ 3.61
PPP1CA-204ENST00000526510 MYO15BQ96JP2 1530 aa37.33■■■■□ 3.57
PPP1CA-204ENST00000526510 NACADO15069 1562 aa37.16■■■■□ 3.54
PPP1CA-204ENST00000526510 SHROOM4Q9ULL8 1493 aa37.06■■■■□ 3.52
PPP1CA-204ENST00000526510 RB1CC1Q8TDY2 1594 aa36.89■■■■□ 3.5
PPP1CA-204ENST00000526510 SCRIBQ14160 1630 aa36.68■■■■□ 3.46
PPP1CA-204ENST00000526510 UNC13AQ9UPW8 1703 aa36.35■■■■□ 3.41
PPP1CA-204ENST00000526510 BICRAQ9NZM4 1560 aa35.88■■■■□ 3.33
PPP1CA-204ENST00000526510 PABPN1Q86U42 306 aaKnown RBP eCLIP35.62■■■■□ 3.29
PPP1CA-204ENST00000526510 SUPT5HO00267 1087 aaKnown RBP35.52■■■■□ 3.28
PPP1CA-204ENST00000526510 CECR2Q9BXF3 1484 aa35.5■■■■□ 3.27
PPP1CA-204ENST00000526510 RSF1Q96T23 1441 aaPredicted RBP35.31■■■■□ 3.24
PPP1CA-204ENST00000526510 MROH2BQ7Z745 1585 aa35.28■■■■□ 3.24
PPP1CA-204ENST00000526510 BAZ1AQ9NRL2 1556 aaPredicted RBP35.23■■■■□ 3.23
PPP1CA-204ENST00000526510 SMARCA4P51532 1647 aa35.16■■■■□ 3.22
PPP1CA-204ENST00000526510 WIZO95785 1651 aa35.03■■■■□ 3.2
PPP1CA-204ENST00000526510 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
PPP1CA-204ENST00000526510 PEG3Q9GZU2 1588 aa34.72■■■■□ 3.15
PPP1CA-204ENST00000526510 TOP2AP11388 1531 aaKnown RBP34.6■■■■□ 3.13
PPP1CA-204ENST00000526510 ATAD2BQ9ULI0 1458 aa34.57■■■■□ 3.12
PPP1CA-204ENST00000526510 SMARCA2P51531 1590 aa34.53■■■■□ 3.12
PPP1CA-204ENST00000526510 BAZ1BQ9UIG0 1483 aaKnown RBP34.34■■■■□ 3.09
PPP1CA-204ENST00000526510 CC2D2AQ9P2K1 1620 aa34.3■■■■□ 3.08
PPP1CA-204ENST00000526510 NCAPD3P42695 1498 aa34.28■■■■□ 3.08
PPP1CA-204ENST00000526510 HMGXB3Q12766 1538 aa34.26■■■■□ 3.07
PPP1CA-204ENST00000526510 CCDC88BA6NC98 1476 aa34.23■■■■□ 3.07
PPP1CA-204ENST00000526510 CHIC1Q5VXU3 224 aa33.96■■■■□ 3.03
PPP1CA-204ENST00000526510 DNAJC5BQ9UF47 199 aa33.55■■■□□ 2.96
PPP1CA-204ENST00000526510 ABCC8Q09428 1581 aa33.5■■■□□ 2.95
PPP1CA-204ENST00000526510 CFTRP13569 1480 aa33.48■■■□□ 2.95
PPP1CA-204ENST00000526510 PRDM2Q13029 1718 aa33.47■■■□□ 2.95
PPP1CA-204ENST00000526510 TRIM41Q8WV44 630 aa33.39■■■□□ 2.94
PPP1CA-204ENST00000526510 CADPSQ9ULU8 1353 aa33.36■■■□□ 2.93
PPP1CA-204ENST00000526510 NESP48681 1621 aa33.22■■■□□ 2.91
PPP1CA-204ENST00000526510 WRNQ14191 1432 aaPredicted RBP eCLIP33.22■■■□□ 2.91
PPP1CA-204ENST00000526510 SYNJ1O43426 1573 aa33.19■■■□□ 2.9
PPP1CA-204ENST00000526510 LAMC3Q9Y6N6 1575 aa33.18■■■□□ 2.9
PPP1CA-204ENST00000526510 BIVM-ERCC5R4GMW8 1640 aa33.05■■■□□ 2.88
PPP1CA-204ENST00000526510 TOP2BQ02880 1626 aa33.05■■■□□ 2.88
PPP1CA-204ENST00000526510 FANCD2Q9BXW9 1451 aa33.02■■■□□ 2.88
PPP1CA-204ENST00000526510 CUX1P39880 1505 aa33■■■□□ 2.87
PPP1CA-204ENST00000526510 KIF21AQ7Z4S6 1674 aa32.89■■■□□ 2.86
PPP1CA-204ENST00000526510 PDS5BQ9NTI5 1447 aa32.84■■■□□ 2.85
PPP1CA-204ENST00000526510 CEP164Q9UPV0 1460 aa32.83■■■□□ 2.85
PPP1CA-204ENST00000526510 FAM9AQ8IZU1 332 aaPredicted RBP32.81■■■□□ 2.84
PPP1CA-204ENST00000526510 SOGA1O94964 1423 aa32.79■■■□□ 2.84
PPP1CA-204ENST00000526510 DNMBPQ6XZF7 1577 aa32.74■■■□□ 2.83
PPP1CA-204ENST00000526510 RUSC2Q8N2Y8 1516 aa32.72■■■□□ 2.83
PPP1CA-204ENST00000526510 TOPBP1Q92547 1522 aa32.68■■■□□ 2.82
PPP1CA-204ENST00000526510 URB2Q14146 1524 aaKnown RBP32.67■■■□□ 2.82
PPP1CA-204ENST00000526510 LOC105371045A0A1W2PR82 267 aa32.66■■■□□ 2.82
PPP1CA-204ENST00000526510 FGD5Q6ZNL6 1462 aa32.63■■■□□ 2.81
PPP1CA-204ENST00000526510 EEA1Q15075 1411 aa32.61■■■□□ 2.81
PPP1CA-204ENST00000526510 POLA1P09884 1462 aaPredicted RBP32.5■■■□□ 2.79
PPP1CA-204ENST00000526510 MRC2Q9UBG0 1479 aa32.48■■■□□ 2.79
PPP1CA-204ENST00000526510 CSRNP3Q8WYN3 585 aa32.45■■■□□ 2.79
PPP1CA-204ENST00000526510 ERCC6Q03468 1493 aa32.41■■■□□ 2.78
PPP1CA-204ENST00000526510 RAD54L2Q9Y4B4 1467 aa32.4■■■□□ 2.78
PPP1CA-204ENST00000526510 WDR97A6NE52 1622 aa32.37■■■□□ 2.77
PPP1CA-204ENST00000526510 KIF27Q86VH2 1401 aa32.36■■■□□ 2.77
PPP1CA-204ENST00000526510 WDR62O43379 1518 aa32.36■■■□□ 2.77
PPP1CA-204ENST00000526510 EHMT2Q96KQ7 1210 aa32.36■■■□□ 2.77
PPP1CA-204ENST00000526510 THOC2Q8NI27 1593 aaKnown RBP32.36■■■□□ 2.77
PPP1CA-204ENST00000526510 CUX2O14529 1486 aa32.35■■■□□ 2.77
PPP1CA-204ENST00000526510 ABCA10Q8WWZ4 1543 aa32.33■■■□□ 2.77
PPP1CA-204ENST00000526510 KIF21BO75037 1637 aa32.31■■■□□ 2.76
PPP1CA-204ENST00000526510 TARBP1Q13395 1621 aaKnown RBP32.27■■■□□ 2.76
PPP1CA-204ENST00000526510 GOLGA3Q08378 1498 aa32.19■■■□□ 2.74
PPP1CA-204ENST00000526510 PRXQ9BXM0 1461 aa32.16■■■□□ 2.74
PPP1CA-204ENST00000526510 ABCA5Q8WWZ7 1642 aa32.15■■■□□ 2.74
PPP1CA-204ENST00000526510 IGF1RP08069 1367 aa32.13■■■□□ 2.73
PPP1CA-204ENST00000526510 RAPGEF2Q9Y4G8 1499 aa32.13■■■□□ 2.73
PPP1CA-204ENST00000526510 ERICH3Q5RHP9 1530 aa32.09■■■□□ 2.73
PPP1CA-204ENST00000526510 TDRD9Q8NDG6 1382 aaKnown RBP32.06■■■□□ 2.72
PPP1CA-204ENST00000526510 TNIKQ9UKE5 1360 aa32.04■■■□□ 2.72
PPP1CA-204ENST00000526510 IFT140Q96RY7 1462 aa32.04■■■□□ 2.72
PPP1CA-204ENST00000526510 GAPVD1Q14C86 1478 aa32.01■■■□□ 2.71
PPP1CA-204ENST00000526510 UBTFP17480 764 aaKnown RBP31.99■■■□□ 2.71
PPP1CA-204ENST00000526510 PBRM1Q86U86 1689 aa31.97■■■□□ 2.71
PPP1CA-204ENST00000526510 CUL7Q14999 1698 aa31.96■■■□□ 2.71
PPP1CA-204ENST00000526510 CARMIL1Q5VZK9 1371 aa31.95■■■□□ 2.7
PPP1CA-204ENST00000526510 ZNF608Q9ULD9 1512 aaPredicted RBP31.94■■■□□ 2.7
PPP1CA-204ENST00000526510 AQRO60306 1485 aaKnown RBP eCLIP31.91■■■□□ 2.71e-7■■■■■ 30.5
PPP1CA-204ENST00000526510 CEP162Q5TB80 1403 aa31.88■■■□□ 2.69
PPP1CA-204ENST00000526510 EIF4G3O43432 1585 aaKnown RBP31.85■■■□□ 2.69
PPP1CA-204ENST00000526510 GRIN2BQ13224 1484 aa31.77■■■□□ 2.68
PPP1CA-204ENST00000526510 ADAMTS12P58397 1594 aa31.72■■■□□ 2.67
PPP1CA-204ENST00000526510 CLIP1P30622 1438 aa31.66■■■□□ 2.66
PPP1CA-204ENST00000526510 CTTNBP2Q8WZ74 1663 aa31.65■■■□□ 2.66
PPP1CA-204ENST00000526510 FHAD1B1AJZ9 1412 aa31.64■■■□□ 2.65
PPP1CA-204ENST00000526510 SNAPC4Q5SXM2 1469 aa31.61■■■□□ 2.65
PPP1CA-204ENST00000526510 RANGAP1P46060 587 aaPredicted RBP31.55■■■□□ 2.64
PPP1CA-204ENST00000526510 MAGI1Q96QZ7 1491 aaPredicted RBP31.53■■■□□ 2.64
PPP1CA-204ENST00000526510 ARHGAP35Q9NRY4 1499 aa31.45■■■□□ 2.63
PPP1CA-204ENST00000526510 ARAP1Q96P48 1450 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms