RNA–Protein interactions for RNA: ENST00000526469.5

GSDMD-207, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 1,643 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-207ENST00000526469 NISCHQ9Y2I1 1504 aa53.35■■■■■ 6.13
GSDMD-207ENST00000526469 CCDC180Q9P1Z9 1646 aa46.85■■■■■ 5.09
GSDMD-207ENST00000526469 ZCCHC6Q5VYS8 1495 aaKnown RBP44.75■■■■■ 4.75
GSDMD-207ENST00000526469 ABCC9O60706 1549 aa44.42■■■■■ 4.7
GSDMD-207ENST00000526469 DCAF1Q9Y4B6 1507 aa44.21■■■■■ 4.67
GSDMD-207ENST00000526469 DCAF8L2P0C7V8 631 aa43.99■■■■■ 4.63
GSDMD-207ENST00000526469 MYO15BQ96JP2 1530 aa43.86■■■■■ 4.61
GSDMD-207ENST00000526469 NACADO15069 1562 aa43.67■■■■■ 4.58
GSDMD-207ENST00000526469 RB1CC1Q8TDY2 1594 aa43.39■■■■■ 4.54
GSDMD-207ENST00000526469 SHROOM4Q9ULL8 1493 aa43.04■■■■■ 4.48
GSDMD-207ENST00000526469 SCRIBQ14160 1630 aa42.86■■■■■ 4.45
GSDMD-207ENST00000526469 UNC13AQ9UPW8 1703 aa42.47■■■■■ 4.39
GSDMD-207ENST00000526469 BICRAQ9NZM4 1560 aa41.98■■■■■ 4.31
GSDMD-207ENST00000526469 PABPN1Q86U42 306 aaKnown RBP eCLIP41.72■■■■■ 4.275e-7■■■■■ 27.2
GSDMD-207ENST00000526469 CECR2Q9BXF3 1484 aa41.37■■■■■ 4.21
GSDMD-207ENST00000526469 BAZ1AQ9NRL2 1556 aaPredicted RBP41.28■■■■■ 4.2
GSDMD-207ENST00000526469 SUPT5HO00267 1087 aaKnown RBP41.24■■■■■ 4.19
GSDMD-207ENST00000526469 RSF1Q96T23 1441 aaPredicted RBP41.17■■■■■ 4.18
GSDMD-207ENST00000526469 MROH2BQ7Z745 1585 aa41.13■■■■■ 4.18
GSDMD-207ENST00000526469 SMARCA4P51532 1647 aa41.12■■■■■ 4.17
GSDMD-207ENST00000526469 WIZO95785 1651 aa40.8■■■■■ 4.12
GSDMD-207ENST00000526469 EIF4G1Q04637 1599 aaKnown RBP40.78■■■■■ 4.12
GSDMD-207ENST00000526469 PEG3Q9GZU2 1588 aa40.68■■■■■ 4.1
GSDMD-207ENST00000526469 SMARCA2P51531 1590 aa40.56■■■■■ 4.08
GSDMD-207ENST00000526469 DNAJC5BQ9UF47 199 aa40.49■■■■■ 4.07
GSDMD-207ENST00000526469 ATAD2BQ9ULI0 1458 aa40.49■■■■■ 4.07
GSDMD-207ENST00000526469 TOP2AP11388 1531 aaKnown RBP40.45■■■■■ 4.07
GSDMD-207ENST00000526469 BAZ1BQ9UIG0 1483 aaKnown RBP40.27■■■■■ 4.04
GSDMD-207ENST00000526469 CC2D2AQ9P2K1 1620 aa40.27■■■■■ 4.04
GSDMD-207ENST00000526469 NCAPD3P42695 1498 aa40.24■■■■■ 4.03
GSDMD-207ENST00000526469 HMGXB3Q12766 1538 aa40.22■■■■■ 4.03
GSDMD-207ENST00000526469 CCDC88BA6NC98 1476 aa39.93■■■■□ 3.98
GSDMD-207ENST00000526469 CHIC1Q5VXU3 224 aa39.31■■■■□ 3.88
GSDMD-207ENST00000526469 CFTRP13569 1480 aa39.23■■■■□ 3.87
GSDMD-207ENST00000526469 PRDM2Q13029 1718 aa39.18■■■■□ 3.86
GSDMD-207ENST00000526469 CADPSQ9ULU8 1353 aa39.15■■■■□ 3.86
GSDMD-207ENST00000526469 LAMC3Q9Y6N6 1575 aa39.01■■■■□ 3.83
GSDMD-207ENST00000526469 ABCC8Q09428 1581 aa38.94■■■■□ 3.82
GSDMD-207ENST00000526469 TRIM41Q8WV44 630 aa38.89■■■■□ 3.82
GSDMD-207ENST00000526469 NESP48681 1621 aa38.85■■■■□ 3.81
GSDMD-207ENST00000526469 WRNQ14191 1432 aaPredicted RBP eCLIP38.81■■■■□ 3.8
GSDMD-207ENST00000526469 FANCD2Q9BXW9 1451 aa38.73■■■■□ 3.79
GSDMD-207ENST00000526469 PDS5BQ9NTI5 1447 aa38.67■■■■□ 3.78
GSDMD-207ENST00000526469 SYNJ1O43426 1573 aa38.65■■■■□ 3.78
GSDMD-207ENST00000526469 TOP2BQ02880 1626 aa38.59■■■■□ 3.77
GSDMD-207ENST00000526469 BIVM-ERCC5R4GMW8 1640 aa38.59■■■■□ 3.77
GSDMD-207ENST00000526469 CEP164Q9UPV0 1460 aa38.56■■■■□ 3.76
GSDMD-207ENST00000526469 CUX1P39880 1505 aa38.51■■■■□ 3.75
GSDMD-207ENST00000526469 KIF21AQ7Z4S6 1674 aa38.5■■■■□ 3.75
GSDMD-207ENST00000526469 DNMBPQ6XZF7 1577 aa38.38■■■■□ 3.73
GSDMD-207ENST00000526469 ERCC6Q03468 1493 aa38.29■■■■□ 3.72
GSDMD-207ENST00000526469 TOPBP1Q92547 1522 aa38.27■■■■□ 3.72
GSDMD-207ENST00000526469 URB2Q14146 1524 aaKnown RBP38.23■■■■□ 3.71
GSDMD-207ENST00000526469 MRC2Q9UBG0 1479 aa38.19■■■■□ 3.7
GSDMD-207ENST00000526469 FGD5Q6ZNL6 1462 aa38.16■■■■□ 3.7
GSDMD-207ENST00000526469 EEA1Q15075 1411 aa38.14■■■■□ 3.7
GSDMD-207ENST00000526469 SOGA1O94964 1423 aa38.1■■■■□ 3.69
GSDMD-207ENST00000526469 FAM9AQ8IZU1 332 aaPredicted RBP38.05■■■■□ 3.68
GSDMD-207ENST00000526469 POLA1P09884 1462 aaPredicted RBP38.04■■■■□ 3.68
GSDMD-207ENST00000526469 WDR62O43379 1518 aa38.02■■■■□ 3.68
GSDMD-207ENST00000526469 THOC2Q8NI27 1593 aaKnown RBP37.98■■■■□ 3.67
GSDMD-207ENST00000526469 RUSC2Q8N2Y8 1516 aa37.95■■■■□ 3.67
GSDMD-207ENST00000526469 KIF27Q86VH2 1401 aa37.9■■■■□ 3.66
GSDMD-207ENST00000526469 ABCA10Q8WWZ4 1543 aa37.86■■■■□ 3.65
GSDMD-207ENST00000526469 CUX2O14529 1486 aa37.84■■■■□ 3.65
GSDMD-207ENST00000526469 RAD54L2Q9Y4B4 1467 aa37.84■■■■□ 3.65
GSDMD-207ENST00000526469 CSRNP3Q8WYN3 585 aa37.83■■■■□ 3.65
GSDMD-207ENST00000526469 WDR97A6NE52 1622 aa37.82■■■■□ 3.65
GSDMD-207ENST00000526469 TARBP1Q13395 1621 aaKnown RBP37.75■■■■□ 3.63
GSDMD-207ENST00000526469 LOC105371045A0A1W2PR82 267 aa37.69■■■■□ 3.62
GSDMD-207ENST00000526469 IFT140Q96RY7 1462 aa37.68■■■■□ 3.62
GSDMD-207ENST00000526469 KIF21BO75037 1637 aa37.65■■■■□ 3.62
GSDMD-207ENST00000526469 ABCA5Q8WWZ7 1642 aa37.61■■■■□ 3.61
GSDMD-207ENST00000526469 GOLGA3Q08378 1498 aa37.54■■■■□ 3.6
GSDMD-207ENST00000526469 GAPVD1Q14C86 1478 aa37.51■■■■□ 3.59
GSDMD-207ENST00000526469 PRXQ9BXM0 1461 aa37.51■■■■□ 3.59
GSDMD-207ENST00000526469 IGF1RP08069 1367 aa37.51■■■■□ 3.59
GSDMD-207ENST00000526469 TDRD9Q8NDG6 1382 aaKnown RBP37.49■■■■□ 3.59
GSDMD-207ENST00000526469 ERICH3Q5RHP9 1530 aa37.48■■■■□ 3.59
GSDMD-207ENST00000526469 EHMT2Q96KQ7 1210 aa37.44■■■■□ 3.58
GSDMD-207ENST00000526469 CUL7Q14999 1698 aa37.44■■■■□ 3.58
GSDMD-207ENST00000526469 PBRM1Q86U86 1689 aa37.41■■■■□ 3.58
GSDMD-207ENST00000526469 RAPGEF2Q9Y4G8 1499 aa37.38■■■■□ 3.58
GSDMD-207ENST00000526469 ZNF608Q9ULD9 1512 aaPredicted RBP37.36■■■■□ 3.57
GSDMD-207ENST00000526469 CARMIL1Q5VZK9 1371 aa37.35■■■■□ 3.57
GSDMD-207ENST00000526469 EIF4G3O43432 1585 aaKnown RBP37.34■■■■□ 3.57
GSDMD-207ENST00000526469 AQRO60306 1485 aaKnown RBP eCLIP37.34■■■■□ 3.57
GSDMD-207ENST00000526469 TNIKQ9UKE5 1360 aa37.32■■■■□ 3.56
GSDMD-207ENST00000526469 GRIN2BQ13224 1484 aa37.3■■■■□ 3.56
GSDMD-207ENST00000526469 UBTFP17480 764 aaKnown RBP37.29■■■■□ 3.56
GSDMD-207ENST00000526469 ADAMTS12P58397 1594 aa37.14■■■■□ 3.54
GSDMD-207ENST00000526469 FHAD1B1AJZ9 1412 aa37.12■■■■□ 3.53
GSDMD-207ENST00000526469 MAGI1Q96QZ7 1491 aaPredicted RBP37.07■■■■□ 3.52
GSDMD-207ENST00000526469 CEP162Q5TB80 1403 aa37.06■■■■□ 3.52
GSDMD-207ENST00000526469 SNAPC4Q5SXM2 1469 aa37.05■■■■□ 3.52
GSDMD-207ENST00000526469 CTTNBP2Q8WZ74 1663 aa36.96■■■■□ 3.51
GSDMD-207ENST00000526469 SYNJ2O15056 1496 aa36.89■■■■□ 3.5
GSDMD-207ENST00000526469 CLIP1P30622 1438 aa36.88■■■■□ 3.5
GSDMD-207ENST00000526469 GRIN2AQ12879 1464 aa36.83■■■■□ 3.49
GSDMD-207ENST00000526469 CHMP7Q8WUX9 453 aaPredicted RBP36.75■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms