RNA–Protein interactions for RNA: ENST00000526454.1

SCYL1-207, Transcript of SCY1 like pseudokinase 1, humanhuman

TSL 2

Gene SCYL1, Length 954 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-207ENST00000526454 NISCHQ9Y2I1 1504 aa34.5■■■■□ 3.11
SCYL1-207ENST00000526454 ABCC9O60706 1549 aa31.44■■■□□ 2.62
SCYL1-207ENST00000526454 CCDC180Q9P1Z9 1646 aa31.09■■■□□ 2.57
SCYL1-207ENST00000526454 DNAJC5BQ9UF47 199 aa29.84■■■□□ 2.37
SCYL1-207ENST00000526454 RB1CC1Q8TDY2 1594 aa29.71■■■□□ 2.35
SCYL1-207ENST00000526454 NACADO15069 1562 aa29.42■■■□□ 2.3
SCYL1-207ENST00000526454 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
SCYL1-207ENST00000526454 PABPN1Q86U42 306 aaKnown RBP eCLIP29.21■■■□□ 2.27
SCYL1-207ENST00000526454 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
SCYL1-207ENST00000526454 BICRAQ9NZM4 1560 aa28.99■■■□□ 2.23
SCYL1-207ENST00000526454 MYO15BQ96JP2 1530 aa28.88■■■□□ 2.21
SCYL1-207ENST00000526454 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
SCYL1-207ENST00000526454 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
SCYL1-207ENST00000526454 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
SCYL1-207ENST00000526454 SCRIBQ14160 1630 aa28.38■■■□□ 2.13
SCYL1-207ENST00000526454 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
SCYL1-207ENST00000526454 CECR2Q9BXF3 1484 aa28.31■■■□□ 2.12
SCYL1-207ENST00000526454 EIF4G1Q04637 1599 aaKnown RBP28.24■■■□□ 2.11
SCYL1-207ENST00000526454 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
SCYL1-207ENST00000526454 NCAPD3P42695 1498 aa27.17■■□□□ 1.94
SCYL1-207ENST00000526454 CUX2O14529 1486 aa27.13■■□□□ 1.93
SCYL1-207ENST00000526454 ERCC6Q03468 1493 aa27.08■■□□□ 1.93
SCYL1-207ENST00000526454 ATAD2BQ9ULI0 1458 aa27.08■■□□□ 1.93
SCYL1-207ENST00000526454 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
SCYL1-207ENST00000526454 NESP48681 1621 aa26.97■■□□□ 1.91
SCYL1-207ENST00000526454 HMGXB3Q12766 1538 aa26.95■■□□□ 1.91
SCYL1-207ENST00000526454 SMARCA2P51531 1590 aa26.94■■□□□ 1.9
SCYL1-207ENST00000526454 BAZ1BQ9UIG0 1483 aaKnown RBP26.78■■□□□ 1.88
SCYL1-207ENST00000526454 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
SCYL1-207ENST00000526454 THOC2Q8NI27 1593 aaKnown RBP26.75■■□□□ 1.87
SCYL1-207ENST00000526454 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
SCYL1-207ENST00000526454 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
SCYL1-207ENST00000526454 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
SCYL1-207ENST00000526454 LAMC3Q9Y6N6 1575 aa26.62■■□□□ 1.85
SCYL1-207ENST00000526454 PDS5BQ9NTI5 1447 aa26.41■■□□□ 1.82
SCYL1-207ENST00000526454 WIZO95785 1651 aa26.33■■□□□ 1.81
SCYL1-207ENST00000526454 CADPSQ9ULU8 1353 aa26.32■■□□□ 1.8
SCYL1-207ENST00000526454 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
SCYL1-207ENST00000526454 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
SCYL1-207ENST00000526454 WDR62O43379 1518 aa26.24■■□□□ 1.79
SCYL1-207ENST00000526454 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
SCYL1-207ENST00000526454 CEP164Q9UPV0 1460 aa26.1■■□□□ 1.77
SCYL1-207ENST00000526454 FANCD2Q9BXW9 1451 aa26.06■■□□□ 1.76
SCYL1-207ENST00000526454 CFTRP13569 1480 aa25.98■■□□□ 1.75
SCYL1-207ENST00000526454 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
SCYL1-207ENST00000526454 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
SCYL1-207ENST00000526454 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
SCYL1-207ENST00000526454 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
SCYL1-207ENST00000526454 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
SCYL1-207ENST00000526454 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
SCYL1-207ENST00000526454 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
SCYL1-207ENST00000526454 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
SCYL1-207ENST00000526454 CCDC88BA6NC98 1476 aa25.62■■□□□ 1.69
SCYL1-207ENST00000526454 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
SCYL1-207ENST00000526454 IFT140Q96RY7 1462 aa25.57■■□□□ 1.68
SCYL1-207ENST00000526454 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
SCYL1-207ENST00000526454 ARHGEF11O15085 1522 aa25.5■■□□□ 1.67
SCYL1-207ENST00000526454 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
SCYL1-207ENST00000526454 DNMBPQ6XZF7 1577 aa25.42■■□□□ 1.66
SCYL1-207ENST00000526454 CHD1O14646 1710 aa25.41■■□□□ 1.66
SCYL1-207ENST00000526454 TARBP1Q13395 1621 aaKnown RBP25.39■■□□□ 1.66
SCYL1-207ENST00000526454 AQRO60306 1485 aaKnown RBP eCLIP25.36■■□□□ 1.653e-7■■■■■ 34.1
SCYL1-207ENST00000526454 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
SCYL1-207ENST00000526454 CYB5RLQ6IPT4 315 aa25.28■■□□□ 1.64
SCYL1-207ENST00000526454 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
SCYL1-207ENST00000526454 ARAP1Q96P48 1450 aa25.26■■□□□ 1.63
SCYL1-207ENST00000526454 RAD54L2Q9Y4B4 1467 aa25.22■■□□□ 1.63
SCYL1-207ENST00000526454 FBLN2P98095 1184 aa25.18■■□□□ 1.62
SCYL1-207ENST00000526454 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
SCYL1-207ENST00000526454 SOGA1O94964 1423 aa25.1■■□□□ 1.61
SCYL1-207ENST00000526454 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
SCYL1-207ENST00000526454 FGD5Q6ZNL6 1462 aa25.08■■□□□ 1.6
SCYL1-207ENST00000526454 TRHP20396 242 aaPredicted RBP25.07■■□□□ 1.6
SCYL1-207ENST00000526454 CLASP1Q7Z460 1538 aa25.07■■□□□ 1.6
SCYL1-207ENST00000526454 CUX1P39880 1505 aa25.04■■□□□ 1.6
SCYL1-207ENST00000526454 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
SCYL1-207ENST00000526454 MAGI1Q96QZ7 1491 aaPredicted RBP24.95■■□□□ 1.58
SCYL1-207ENST00000526454 SYNJ1O43426 1573 aa24.94■■□□□ 1.58
SCYL1-207ENST00000526454 GRIN2BQ13224 1484 aa24.91■■□□□ 1.58
SCYL1-207ENST00000526454 CHMP7Q8WUX9 453 aaPredicted RBP24.91■■□□□ 1.58
SCYL1-207ENST00000526454 PBRM1Q86U86 1689 aa24.91■■□□□ 1.58
SCYL1-207ENST00000526454 SYNJ2O15056 1496 aa24.88■■□□□ 1.57
SCYL1-207ENST00000526454 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
SCYL1-207ENST00000526454 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
SCYL1-207ENST00000526454 ABCA10Q8WWZ4 1543 aa24.74■■□□□ 1.55
SCYL1-207ENST00000526454 ERCC6L2Q5T890 1561 aa24.73■■□□□ 1.55
SCYL1-207ENST00000526454 WRNQ14191 1432 aaPredicted RBP eCLIP24.72■■□□□ 1.55
SCYL1-207ENST00000526454 TOP2BQ02880 1626 aa24.68■■□□□ 1.54
SCYL1-207ENST00000526454 BIVM-ERCC5R4GMW8 1640 aa24.68■■□□□ 1.54
SCYL1-207ENST00000526454 GRIN2AQ12879 1464 aa24.63■■□□□ 1.53
SCYL1-207ENST00000526454 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
SCYL1-207ENST00000526454 ADAMTS12P58397 1594 aa24.62■■□□□ 1.53
SCYL1-207ENST00000526454 NUP160Q12769 1436 aa24.56■■□□□ 1.52
SCYL1-207ENST00000526454 SHROOM2Q13796 1616 aa24.53■■□□□ 1.52
SCYL1-207ENST00000526454 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
SCYL1-207ENST00000526454 FHAD1B1AJZ9 1412 aa24.45■■□□□ 1.51
SCYL1-207ENST00000526454 KIF13AQ9H1H9 1805 aa24.44■■□□□ 1.5
SCYL1-207ENST00000526454 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
SCYL1-207ENST00000526454 PRG4Q92954 1404 aaPredicted RBP24.34■■□□□ 1.49
SCYL1-207ENST00000526454 RUSC2Q8N2Y8 1516 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms