RNA–Protein interactions for RNA: ENST00000526450.1

PITPNM1-206, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 3

Gene PITPNM1, Length 750 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-206ENST00000526450 NISCHQ9Y2I1 1504 aa46.3■■■■■ 5
PITPNM1-206ENST00000526450 CCDC180Q9P1Z9 1646 aa41.38■■■■■ 4.21
PITPNM1-206ENST00000526450 ABCC9O60706 1549 aa40.72■■■■■ 4.11
PITPNM1-206ENST00000526450 RB1CC1Q8TDY2 1594 aa39.01■■■■□ 3.84
PITPNM1-206ENST00000526450 NACADO15069 1562 aa38.88■■■■□ 3.81
PITPNM1-206ENST00000526450 DCAF8L2P0C7V8 631 aa38.69■■■■□ 3.78
PITPNM1-206ENST00000526450 ZCCHC6Q5VYS8 1495 aaKnown RBP38.53■■■■□ 3.76
PITPNM1-206ENST00000526450 MYO15BQ96JP2 1530 aa38.52■■■■□ 3.76
PITPNM1-206ENST00000526450 UNC13AQ9UPW8 1703 aa38.38■■■■□ 3.73
PITPNM1-206ENST00000526450 DCAF1Q9Y4B6 1507 aa38.27■■■■□ 3.72
PITPNM1-206ENST00000526450 PABPN1Q86U42 306 aaKnown RBP eCLIP37.95■■■■□ 3.67
PITPNM1-206ENST00000526450 BICRAQ9NZM4 1560 aa37.94■■■■□ 3.66
PITPNM1-206ENST00000526450 SCRIBQ14160 1630 aa37.74■■■■□ 3.63
PITPNM1-206ENST00000526450 DNAJC5BQ9UF47 199 aa37.64■■■■□ 3.62
PITPNM1-206ENST00000526450 SHROOM4Q9ULL8 1493 aa37.35■■■■□ 3.57
PITPNM1-206ENST00000526450 EIF4G1Q04637 1599 aaKnown RBP36.91■■■■□ 3.5
PITPNM1-206ENST00000526450 CC2D2AQ9P2K1 1620 aa36.87■■■■□ 3.49
PITPNM1-206ENST00000526450 CECR2Q9BXF3 1484 aa36.58■■■■□ 3.45
PITPNM1-206ENST00000526450 SMARCA4P51532 1647 aa36.06■■■■□ 3.36
PITPNM1-206ENST00000526450 BAZ1AQ9NRL2 1556 aaPredicted RBP35.89■■■■□ 3.34
PITPNM1-206ENST00000526450 ATAD2BQ9ULI0 1458 aa35.86■■■■□ 3.33
PITPNM1-206ENST00000526450 NCAPD3P42695 1498 aa35.85■■■■□ 3.33
PITPNM1-206ENST00000526450 SMARCA2P51531 1590 aa35.79■■■■□ 3.32
PITPNM1-206ENST00000526450 MROH2BQ7Z745 1585 aa35.72■■■■□ 3.31
PITPNM1-206ENST00000526450 HMGXB3Q12766 1538 aa35.7■■■■□ 3.31
PITPNM1-206ENST00000526450 PEG3Q9GZU2 1588 aa35.67■■■■□ 3.3
PITPNM1-206ENST00000526450 BAZ1BQ9UIG0 1483 aaKnown RBP35.54■■■■□ 3.28
PITPNM1-206ENST00000526450 WIZO95785 1651 aa35.39■■■■□ 3.26
PITPNM1-206ENST00000526450 NESP48681 1621 aa35.19■■■■□ 3.22
PITPNM1-206ENST00000526450 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
PITPNM1-206ENST00000526450 ERCC6Q03468 1493 aa35.05■■■■□ 3.2
PITPNM1-206ENST00000526450 LAMC3Q9Y6N6 1575 aa35■■■■□ 3.19
PITPNM1-206ENST00000526450 TOP2AP11388 1531 aaKnown RBP34.91■■■■□ 3.18
PITPNM1-206ENST00000526450 KIF21AQ7Z4S6 1674 aa34.86■■■■□ 3.17
PITPNM1-206ENST00000526450 CUX2O14529 1486 aa34.79■■■■□ 3.16
PITPNM1-206ENST00000526450 CADPSQ9ULU8 1353 aa34.76■■■■□ 3.16
PITPNM1-206ENST00000526450 THOC2Q8NI27 1593 aaKnown RBP34.76■■■■□ 3.16
PITPNM1-206ENST00000526450 PDS5BQ9NTI5 1447 aa34.68■■■■□ 3.14
PITPNM1-206ENST00000526450 CFTRP13569 1480 aa34.54■■■■□ 3.12
PITPNM1-206ENST00000526450 CCDC88BA6NC98 1476 aa34.47■■■■□ 3.11
PITPNM1-206ENST00000526450 PRDM2Q13029 1718 aa34.47■■■■□ 3.11
PITPNM1-206ENST00000526450 FANCD2Q9BXW9 1451 aa34.42■■■■□ 3.1
PITPNM1-206ENST00000526450 MRC2Q9UBG0 1479 aa34.42■■■■□ 3.1
PITPNM1-206ENST00000526450 CEP164Q9UPV0 1460 aa34.4■■■■□ 3.1
PITPNM1-206ENST00000526450 WDR62O43379 1518 aa34.36■■■■□ 3.09
PITPNM1-206ENST00000526450 URB2Q14146 1524 aaKnown RBP34.14■■■■□ 3.06
PITPNM1-206ENST00000526450 DNAJC5Q9H3Z4 198 aa34.03■■■■□ 3.04
PITPNM1-206ENST00000526450 SUPT5HO00267 1087 aaKnown RBP33.97■■■■□ 3.03
PITPNM1-206ENST00000526450 TOPBP1Q92547 1522 aa33.87■■■■□ 3.01
PITPNM1-206ENST00000526450 DNMBPQ6XZF7 1577 aa33.81■■■■□ 3
PITPNM1-206ENST00000526450 ABCC8Q09428 1581 aa33.74■■■□□ 2.99
PITPNM1-206ENST00000526450 IFT140Q96RY7 1462 aa33.66■■■□□ 2.98
PITPNM1-206ENST00000526450 ZNF608Q9ULD9 1512 aaPredicted RBP33.63■■■□□ 2.97
PITPNM1-206ENST00000526450 TARBP1Q13395 1621 aaKnown RBP33.58■■■□□ 2.97
PITPNM1-206ENST00000526450 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
PITPNM1-206ENST00000526450 CUX1P39880 1505 aa33.53■■■□□ 2.96
PITPNM1-206ENST00000526450 EIF4G3O43432 1585 aaKnown RBP33.52■■■□□ 2.96
PITPNM1-206ENST00000526450 FGD5Q6ZNL6 1462 aa33.44■■■□□ 2.94
PITPNM1-206ENST00000526450 RAD54L2Q9Y4B4 1467 aa33.43■■■□□ 2.94
PITPNM1-206ENST00000526450 AQRO60306 1485 aaKnown RBP eCLIP33.36■■■□□ 2.93
PITPNM1-206ENST00000526450 SOGA1O94964 1423 aa33.35■■■□□ 2.93
PITPNM1-206ENST00000526450 WDR97A6NE52 1622 aa33.31■■■□□ 2.92
PITPNM1-206ENST00000526450 CHD1O14646 1710 aa33.23■■■□□ 2.91
PITPNM1-206ENST00000526450 OSCARQ8IYS5 282 aa33.22■■■□□ 2.91
PITPNM1-206ENST00000526450 TDRD9Q8NDG6 1382 aaKnown RBP33.21■■■□□ 2.91
PITPNM1-206ENST00000526450 BIVM-ERCC5R4GMW8 1640 aa33.2■■■□□ 2.91
PITPNM1-206ENST00000526450 SYNJ1O43426 1573 aa33.18■■■□□ 2.9
PITPNM1-206ENST00000526450 TOP2BQ02880 1626 aa33.16■■■□□ 2.9
PITPNM1-206ENST00000526450 WRNQ14191 1432 aaPredicted RBP eCLIP33.12■■■□□ 2.89
PITPNM1-206ENST00000526450 PBRM1Q86U86 1689 aa33.1■■■□□ 2.89
PITPNM1-206ENST00000526450 ABCA10Q8WWZ4 1543 aa33.07■■■□□ 2.88
PITPNM1-206ENST00000526450 ABCA5Q8WWZ7 1642 aa33.06■■■□□ 2.88
PITPNM1-206ENST00000526450 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
PITPNM1-206ENST00000526450 GRIN2BQ13224 1484 aa33■■■□□ 2.87
PITPNM1-206ENST00000526450 GAPVD1Q14C86 1478 aa32.99■■■□□ 2.87
PITPNM1-206ENST00000526450 MAGI1Q96QZ7 1491 aaPredicted RBP32.96■■■□□ 2.87
PITPNM1-206ENST00000526450 RIMBP3CA6NJZ7 1639 aa32.92■■■□□ 2.86
PITPNM1-206ENST00000526450 RIMBP3BA6NNM3 1639 aa32.92■■■□□ 2.86
PITPNM1-206ENST00000526450 RIMBP3Q9UFD9 1639 aa32.92■■■□□ 2.86
PITPNM1-206ENST00000526450 FBLN2P98095 1184 aa32.92■■■□□ 2.86
PITPNM1-206ENST00000526450 SYNJ2O15056 1496 aa32.84■■■□□ 2.85
PITPNM1-206ENST00000526450 ARHGEF11O15085 1522 aa32.82■■■□□ 2.85
PITPNM1-206ENST00000526450 TRIM41Q8WV44 630 aa32.82■■■□□ 2.84
PITPNM1-206ENST00000526450 CHMP7Q8WUX9 453 aaPredicted RBP32.77■■■□□ 2.84
PITPNM1-206ENST00000526450 CLASP1Q7Z460 1538 aa32.77■■■□□ 2.84
PITPNM1-206ENST00000526450 ADAMTS12P58397 1594 aa32.75■■■□□ 2.83
PITPNM1-206ENST00000526450 ERICH3Q5RHP9 1530 aa32.67■■■□□ 2.82
PITPNM1-206ENST00000526450 GRIN2AQ12879 1464 aa32.62■■■□□ 2.81
PITPNM1-206ENST00000526450 FHAD1B1AJZ9 1412 aa32.56■■■□□ 2.8
PITPNM1-206ENST00000526450 ARAP1Q96P48 1450 aa32.55■■■□□ 2.8
PITPNM1-206ENST00000526450 CEP170Q5SW79 1584 aa32.55■■■□□ 2.8
PITPNM1-206ENST00000526450 NUP160Q12769 1436 aa32.48■■■□□ 2.79
PITPNM1-206ENST00000526450 CYB5RLQ6IPT4 315 aa32.44■■■□□ 2.78
PITPNM1-206ENST00000526450 KIF27Q86VH2 1401 aa32.42■■■□□ 2.78
PITPNM1-206ENST00000526450 CUL7Q14999 1698 aa32.37■■■□□ 2.77
PITPNM1-206ENST00000526450 SHROOM2Q13796 1616 aa32.35■■■□□ 2.77
PITPNM1-206ENST00000526450 ERCC6L2Q5T890 1561 aa32.35■■■□□ 2.77
PITPNM1-206ENST00000526450 IGF1RP08069 1367 aa32.33■■■□□ 2.77
PITPNM1-206ENST00000526450 RUSC2Q8N2Y8 1516 aa32.29■■■□□ 2.76
PITPNM1-206ENST00000526450 CARMIL1Q5VZK9 1371 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms