RNA–Protein interactions for RNA: ENST00000526445.1

PDE4DIP-222, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 4

Gene PDE4DIP, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-222ENST00000526445 NISCHQ9Y2I1 1504 aa28.03■■■□□ 2.08
PDE4DIP-222ENST00000526445 CCDC180Q9P1Z9 1646 aa24.93■■□□□ 1.58
PDE4DIP-222ENST00000526445 ABCC9O60706 1549 aa24.51■■□□□ 1.51
PDE4DIP-222ENST00000526445 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
PDE4DIP-222ENST00000526445 NACADO15069 1562 aa23.52■■□□□ 1.36
PDE4DIP-222ENST00000526445 DCAF8L2P0C7V8 631 aa23.41■■□□□ 1.34
PDE4DIP-222ENST00000526445 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
PDE4DIP-222ENST00000526445 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
PDE4DIP-222ENST00000526445 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
PDE4DIP-222ENST00000526445 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.26
PDE4DIP-222ENST00000526445 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
PDE4DIP-222ENST00000526445 BICRAQ9NZM4 1560 aa22.86■■□□□ 1.25
PDE4DIP-222ENST00000526445 DNAJC5BQ9UF47 199 aa22.71■■□□□ 1.23
PDE4DIP-222ENST00000526445 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
PDE4DIP-222ENST00000526445 SHROOM4Q9ULL8 1493 aa22.64■■□□□ 1.21
PDE4DIP-222ENST00000526445 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
PDE4DIP-222ENST00000526445 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
PDE4DIP-222ENST00000526445 CECR2Q9BXF3 1484 aa22.07■■□□□ 1.12
PDE4DIP-222ENST00000526445 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
PDE4DIP-222ENST00000526445 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
PDE4DIP-222ENST00000526445 BAZ1AQ9NRL2 1556 aaPredicted RBP21.71■■□□□ 1.07
PDE4DIP-222ENST00000526445 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
PDE4DIP-222ENST00000526445 SMARCA2P51531 1590 aa21.64■■□□□ 1.05
PDE4DIP-222ENST00000526445 MROH2BQ7Z745 1585 aa21.58■■□□□ 1.05
PDE4DIP-222ENST00000526445 PEG3Q9GZU2 1588 aa21.58■■□□□ 1.05
PDE4DIP-222ENST00000526445 HMGXB3Q12766 1538 aa21.57■■□□□ 1.04
PDE4DIP-222ENST00000526445 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
PDE4DIP-222ENST00000526445 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
PDE4DIP-222ENST00000526445 WIZO95785 1651 aa21.31■■□□□ 1
PDE4DIP-222ENST00000526445 NESP48681 1621 aa21.18■□□□□ 0.98
PDE4DIP-222ENST00000526445 LAMC3Q9Y6N6 1575 aa21.13■□□□□ 0.97
PDE4DIP-222ENST00000526445 ERCC6Q03468 1493 aa21.12■□□□□ 0.97
PDE4DIP-222ENST00000526445 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
PDE4DIP-222ENST00000526445 CADPSQ9ULU8 1353 aa21.09■□□□□ 0.97
PDE4DIP-222ENST00000526445 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
PDE4DIP-222ENST00000526445 CUX2O14529 1486 aa21.01■□□□□ 0.95
PDE4DIP-222ENST00000526445 CFTRP13569 1480 aa20.94■□□□□ 0.94
PDE4DIP-222ENST00000526445 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.93
PDE4DIP-222ENST00000526445 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
PDE4DIP-222ENST00000526445 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
PDE4DIP-222ENST00000526445 FANCD2Q9BXW9 1451 aa20.8■□□□□ 0.92
PDE4DIP-222ENST00000526445 MRC2Q9UBG0 1479 aa20.78■□□□□ 0.92
PDE4DIP-222ENST00000526445 CEP164Q9UPV0 1460 aa20.76■□□□□ 0.91
PDE4DIP-222ENST00000526445 WDR62O43379 1518 aa20.73■□□□□ 0.91
PDE4DIP-222ENST00000526445 PRDM2Q13029 1718 aa20.64■□□□□ 0.9
PDE4DIP-222ENST00000526445 SUPT5HO00267 1087 aaKnown RBP20.61■□□□□ 0.89
PDE4DIP-222ENST00000526445 URB2Q14146 1524 aaKnown RBP20.61■□□□□ 0.89
PDE4DIP-222ENST00000526445 DNAJC5Q9H3Z4 198 aa20.57■□□□□ 0.88
PDE4DIP-222ENST00000526445 ABCC8Q09428 1581 aa20.48■□□□□ 0.87
PDE4DIP-222ENST00000526445 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
PDE4DIP-222ENST00000526445 DNMBPQ6XZF7 1577 aa20.4■□□□□ 0.86
PDE4DIP-222ENST00000526445 IFT140Q96RY7 1462 aa20.37■□□□□ 0.85
PDE4DIP-222ENST00000526445 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.84
PDE4DIP-222ENST00000526445 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
PDE4DIP-222ENST00000526445 CUX1P39880 1505 aa20.25■□□□□ 0.83
PDE4DIP-222ENST00000526445 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
PDE4DIP-222ENST00000526445 SOGA1O94964 1423 aa20.2■□□□□ 0.82
PDE4DIP-222ENST00000526445 FGD5Q6ZNL6 1462 aa20.19■□□□□ 0.82
PDE4DIP-222ENST00000526445 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
PDE4DIP-222ENST00000526445 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDE4DIP-222ENST00000526445 EIF4G3O43432 1585 aaKnown RBP20.14■□□□□ 0.81
PDE4DIP-222ENST00000526445 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
PDE4DIP-222ENST00000526445 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
PDE4DIP-222ENST00000526445 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
PDE4DIP-222ENST00000526445 WRNQ14191 1432 aaPredicted RBP eCLIP20.08■□□□□ 0.8
PDE4DIP-222ENST00000526445 TOP2BQ02880 1626 aa20.03■□□□□ 0.8
PDE4DIP-222ENST00000526445 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.8
PDE4DIP-222ENST00000526445 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.79
PDE4DIP-222ENST00000526445 SYNJ1O43426 1573 aa20■□□□□ 0.79
PDE4DIP-222ENST00000526445 GRIN2BQ13224 1484 aa19.98■□□□□ 0.79
PDE4DIP-222ENST00000526445 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
PDE4DIP-222ENST00000526445 SNAPC4Q5SXM2 1469 aa19.93■□□□□ 0.78
PDE4DIP-222ENST00000526445 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
PDE4DIP-222ENST00000526445 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
PDE4DIP-222ENST00000526445 CHD1O14646 1710 aa19.89■□□□□ 0.77
PDE4DIP-222ENST00000526445 FBLN2P98095 1184 aa19.89■□□□□ 0.77
PDE4DIP-222ENST00000526445 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
PDE4DIP-222ENST00000526445 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
PDE4DIP-222ENST00000526445 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
PDE4DIP-222ENST00000526445 ERICH3Q5RHP9 1530 aa19.77■□□□□ 0.76
PDE4DIP-222ENST00000526445 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
PDE4DIP-222ENST00000526445 RIMBP3CA6NJZ7 1639 aa19.76■□□□□ 0.75
PDE4DIP-222ENST00000526445 RIMBP3BA6NNM3 1639 aa19.76■□□□□ 0.75
PDE4DIP-222ENST00000526445 RIMBP3Q9UFD9 1639 aa19.76■□□□□ 0.75
PDE4DIP-222ENST00000526445 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
PDE4DIP-222ENST00000526445 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
PDE4DIP-222ENST00000526445 ADAMTS12P58397 1594 aa19.72■□□□□ 0.75
PDE4DIP-222ENST00000526445 TRIM41Q8WV44 630 aa19.72■□□□□ 0.75
PDE4DIP-222ENST00000526445 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
PDE4DIP-222ENST00000526445 NUP160Q12769 1436 aa19.67■□□□□ 0.74
PDE4DIP-222ENST00000526445 KIF27Q86VH2 1401 aa19.67■□□□□ 0.74
PDE4DIP-222ENST00000526445 IGF1RP08069 1367 aa19.66■□□□□ 0.74
PDE4DIP-222ENST00000526445 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
PDE4DIP-222ENST00000526445 CYB5RLQ6IPT4 315 aa19.6■□□□□ 0.73
PDE4DIP-222ENST00000526445 CEP170Q5SW79 1584 aa19.6■□□□□ 0.73
PDE4DIP-222ENST00000526445 CUL7Q14999 1698 aa19.52■□□□□ 0.71
PDE4DIP-222ENST00000526445 CARMIL1Q5VZK9 1371 aa19.51■□□□□ 0.71
PDE4DIP-222ENST00000526445 SHROOM2Q13796 1616 aa19.5■□□□□ 0.71
PDE4DIP-222ENST00000526445 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
PDE4DIP-222ENST00000526445 RUSC2Q8N2Y8 1516 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms