RNA–Protein interactions for RNA: ENST00000526372.1

RAB38-202, Transcript of RAB38, member RAS oncogene family, humanhuman

TSL 3

Gene RAB38, Length 1,007 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-202ENST00000526372 NISCHQ9Y2I1 1504 aa38.53■■■■□ 3.76
RAB38-202ENST00000526372 CCDC180Q9P1Z9 1646 aa34.26■■■■□ 3.07
RAB38-202ENST00000526372 ABCC9O60706 1549 aa33.72■■■□□ 2.99
RAB38-202ENST00000526372 DCAF8L2P0C7V8 631 aa32.34■■■□□ 2.77
RAB38-202ENST00000526372 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
RAB38-202ENST00000526372 NACADO15069 1562 aa32.2■■■□□ 2.75
RAB38-202ENST00000526372 ZCCHC6Q5VYS8 1495 aaKnown RBP32.08■■■□□ 2.73
RAB38-202ENST00000526372 MYO15BQ96JP2 1530 aa31.9■■■□□ 2.7
RAB38-202ENST00000526372 DCAF1Q9Y4B6 1507 aa31.78■■■□□ 2.68
RAB38-202ENST00000526372 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
RAB38-202ENST00000526372 PABPN1Q86U42 306 aaKnown RBP eCLIP31.52■■■□□ 2.64
RAB38-202ENST00000526372 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.61
RAB38-202ENST00000526372 SCRIBQ14160 1630 aa31.38■■■□□ 2.61
RAB38-202ENST00000526372 DNAJC5BQ9UF47 199 aa31.04■■■□□ 2.56
RAB38-202ENST00000526372 SHROOM4Q9ULL8 1493 aa30.85■■■□□ 2.53
RAB38-202ENST00000526372 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
RAB38-202ENST00000526372 CC2D2AQ9P2K1 1620 aa30.46■■■□□ 2.47
RAB38-202ENST00000526372 CECR2Q9BXF3 1484 aa30.24■■■□□ 2.43
RAB38-202ENST00000526372 SMARCA4P51532 1647 aa29.95■■■□□ 2.38
RAB38-202ENST00000526372 BAZ1AQ9NRL2 1556 aaPredicted RBP29.85■■■□□ 2.37
RAB38-202ENST00000526372 ATAD2BQ9ULI0 1458 aa29.78■■■□□ 2.36
RAB38-202ENST00000526372 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
RAB38-202ENST00000526372 NCAPD3P42695 1498 aa29.72■■■□□ 2.35
RAB38-202ENST00000526372 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
RAB38-202ENST00000526372 PEG3Q9GZU2 1588 aa29.57■■■□□ 2.32
RAB38-202ENST00000526372 HMGXB3Q12766 1538 aa29.57■■■□□ 2.32
RAB38-202ENST00000526372 BAZ1BQ9UIG0 1483 aaKnown RBP29.54■■■□□ 2.32
RAB38-202ENST00000526372 WIZO95785 1651 aa29.47■■■□□ 2.31
RAB38-202ENST00000526372 RSF1Q96T23 1441 aaPredicted RBP29.36■■■□□ 2.29
RAB38-202ENST00000526372 NESP48681 1621 aa29.18■■■□□ 2.26
RAB38-202ENST00000526372 TOP2AP11388 1531 aaKnown RBP29.07■■■□□ 2.24
RAB38-202ENST00000526372 ERCC6Q03468 1493 aa29.01■■■□□ 2.23
RAB38-202ENST00000526372 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
RAB38-202ENST00000526372 CADPSQ9ULU8 1353 aa28.87■■■□□ 2.21
RAB38-202ENST00000526372 KIF21AQ7Z4S6 1674 aa28.83■■■□□ 2.21
RAB38-202ENST00000526372 CCDC88BA6NC98 1476 aa28.76■■■□□ 2.19
RAB38-202ENST00000526372 PDS5BQ9NTI5 1447 aa28.75■■■□□ 2.19
RAB38-202ENST00000526372 THOC2Q8NI27 1593 aaKnown RBP28.69■■■□□ 2.18
RAB38-202ENST00000526372 CFTRP13569 1480 aa28.68■■■□□ 2.18
RAB38-202ENST00000526372 SUPT5HO00267 1087 aaKnown RBP28.66■■■□□ 2.18
RAB38-202ENST00000526372 CUX2O14529 1486 aa28.65■■■□□ 2.18
RAB38-202ENST00000526372 FANCD2Q9BXW9 1451 aa28.59■■■□□ 2.17
RAB38-202ENST00000526372 CEP164Q9UPV0 1460 aa28.53■■■□□ 2.16
RAB38-202ENST00000526372 PRDM2Q13029 1718 aa28.52■■■□□ 2.16
RAB38-202ENST00000526372 MRC2Q9UBG0 1479 aa28.51■■■□□ 2.15
RAB38-202ENST00000526372 WDR62O43379 1518 aa28.41■■■□□ 2.14
RAB38-202ENST00000526372 URB2Q14146 1524 aaKnown RBP28.33■■■□□ 2.13
RAB38-202ENST00000526372 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
RAB38-202ENST00000526372 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
RAB38-202ENST00000526372 ABCC8Q09428 1581 aa28■■■□□ 2.07
RAB38-202ENST00000526372 CUX1P39880 1505 aa27.92■■■□□ 2.06
RAB38-202ENST00000526372 IFT140Q96RY7 1462 aa27.91■■■□□ 2.06
RAB38-202ENST00000526372 DNAJC5Q9H3Z4 198 aa27.9■■■□□ 2.06
RAB38-202ENST00000526372 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
RAB38-202ENST00000526372 POLA1P09884 1462 aaPredicted RBP27.88■■■□□ 2.05
RAB38-202ENST00000526372 TARBP1Q13395 1621 aaKnown RBP27.83■■■□□ 2.05
RAB38-202ENST00000526372 FGD5Q6ZNL6 1462 aa27.83■■■□□ 2.04
RAB38-202ENST00000526372 RAD54L2Q9Y4B4 1467 aa27.82■■■□□ 2.04
RAB38-202ENST00000526372 EIF4G3O43432 1585 aaKnown RBP27.76■■■□□ 2.03
RAB38-202ENST00000526372 SOGA1O94964 1423 aa27.75■■■□□ 2.03
RAB38-202ENST00000526372 AQRO60306 1485 aaKnown RBP eCLIP27.71■■■□□ 2.03
RAB38-202ENST00000526372 SYNJ1O43426 1573 aa27.67■■■□□ 2.02
RAB38-202ENST00000526372 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.02
RAB38-202ENST00000526372 TDRD9Q8NDG6 1382 aaKnown RBP27.66■■■□□ 2.02
RAB38-202ENST00000526372 BIVM-ERCC5R4GMW8 1640 aa27.62■■■□□ 2.01
RAB38-202ENST00000526372 TOP2BQ02880 1626 aa27.61■■■□□ 2.01
RAB38-202ENST00000526372 WDR97A6NE52 1622 aa27.6■■■□□ 2.01
RAB38-202ENST00000526372 ABCA10Q8WWZ4 1543 aa27.49■■□□□ 1.99
RAB38-202ENST00000526372 OSCARQ8IYS5 282 aa27.48■■□□□ 1.99
RAB38-202ENST00000526372 CHD1O14646 1710 aa27.47■■□□□ 1.99
RAB38-202ENST00000526372 SNAPC4Q5SXM2 1469 aa27.44■■□□□ 1.98
RAB38-202ENST00000526372 PBRM1Q86U86 1689 aa27.44■■□□□ 1.98
RAB38-202ENST00000526372 ABCA5Q8WWZ7 1642 aa27.43■■□□□ 1.98
RAB38-202ENST00000526372 GAPVD1Q14C86 1478 aa27.43■■□□□ 1.98
RAB38-202ENST00000526372 GRIN2BQ13224 1484 aa27.41■■□□□ 1.98
RAB38-202ENST00000526372 FBLN2P98095 1184 aa27.41■■□□□ 1.98
RAB38-202ENST00000526372 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
RAB38-202ENST00000526372 CHMP7Q8WUX9 453 aaPredicted RBP27.26■■□□□ 1.95
RAB38-202ENST00000526372 SYNJ2O15056 1496 aa27.24■■□□□ 1.95
RAB38-202ENST00000526372 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
RAB38-202ENST00000526372 ERICH3Q5RHP9 1530 aa27.14■■□□□ 1.94
RAB38-202ENST00000526372 RIMBP3CA6NJZ7 1639 aa27.13■■□□□ 1.93
RAB38-202ENST00000526372 RIMBP3BA6NNM3 1639 aa27.13■■□□□ 1.93
RAB38-202ENST00000526372 RIMBP3Q9UFD9 1639 aa27.13■■□□□ 1.93
RAB38-202ENST00000526372 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
RAB38-202ENST00000526372 CLASP1Q7Z460 1538 aa27.09■■□□□ 1.93
RAB38-202ENST00000526372 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
RAB38-202ENST00000526372 GRIN2AQ12879 1464 aa27.08■■□□□ 1.93
RAB38-202ENST00000526372 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
RAB38-202ENST00000526372 KIF27Q86VH2 1401 aa27.07■■□□□ 1.92
RAB38-202ENST00000526372 CEP170Q5SW79 1584 aa27■■□□□ 1.91
RAB38-202ENST00000526372 IGF1RP08069 1367 aa26.99■■□□□ 1.91
RAB38-202ENST00000526372 NUP160Q12769 1436 aa26.94■■□□□ 1.9
RAB38-202ENST00000526372 RUSC2Q8N2Y8 1516 aa26.94■■□□□ 1.9
RAB38-202ENST00000526372 CUL7Q14999 1698 aa26.91■■□□□ 1.9
RAB38-202ENST00000526372 ARAP1Q96P48 1450 aa26.88■■□□□ 1.89
RAB38-202ENST00000526372 CYB5RLQ6IPT4 315 aa26.87■■□□□ 1.89
RAB38-202ENST00000526372 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
RAB38-202ENST00000526372 ERCC6L2Q5T890 1561 aa26.82■■□□□ 1.88
RAB38-202ENST00000526372 SHROOM2Q13796 1616 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms