RNA–Protein interactions for RNA: ENST00000526347.5

PPFIA1-207, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 5

Gene PPFIA1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-207ENST00000526347 NISCHQ9Y2I1 1504 aa28.56■■■□□ 2.16
PPFIA1-207ENST00000526347 CCDC180Q9P1Z9 1646 aa25.48■■□□□ 1.67
PPFIA1-207ENST00000526347 ABCC9O60706 1549 aa25.02■■□□□ 1.6
PPFIA1-207ENST00000526347 RB1CC1Q8TDY2 1594 aa24.03■■□□□ 1.44
PPFIA1-207ENST00000526347 NACADO15069 1562 aa23.97■■□□□ 1.43
PPFIA1-207ENST00000526347 MYO15BQ96JP2 1530 aa23.82■■□□□ 1.4
PPFIA1-207ENST00000526347 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
PPFIA1-207ENST00000526347 ZCCHC6Q5VYS8 1495 aaKnown RBP23.79■■□□□ 1.4
PPFIA1-207ENST00000526347 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
PPFIA1-207ENST00000526347 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
PPFIA1-207ENST00000526347 BICRAQ9NZM4 1560 aa23.34■■□□□ 1.33
PPFIA1-207ENST00000526347 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
PPFIA1-207ENST00000526347 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
PPFIA1-207ENST00000526347 DNAJC5BQ9UF47 199 aa23.11■■□□□ 1.29
PPFIA1-207ENST00000526347 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
PPFIA1-207ENST00000526347 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
PPFIA1-207ENST00000526347 CC2D2AQ9P2K1 1620 aa22.65■■□□□ 1.22
PPFIA1-207ENST00000526347 CECR2Q9BXF3 1484 aa22.52■■□□□ 1.2
PPFIA1-207ENST00000526347 SMARCA4P51532 1647 aa22.2■■□□□ 1.14
PPFIA1-207ENST00000526347 BAZ1AQ9NRL2 1556 aaPredicted RBP22.14■■□□□ 1.13
PPFIA1-207ENST00000526347 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
PPFIA1-207ENST00000526347 ATAD2BQ9ULI0 1458 aa22.11■■□□□ 1.13
PPFIA1-207ENST00000526347 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
PPFIA1-207ENST00000526347 HMGXB3Q12766 1538 aa22.02■■□□□ 1.12
PPFIA1-207ENST00000526347 MROH2BQ7Z745 1585 aa22.01■■□□□ 1.11
PPFIA1-207ENST00000526347 PEG3Q9GZU2 1588 aa22.01■■□□□ 1.11
PPFIA1-207ENST00000526347 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
PPFIA1-207ENST00000526347 WIZO95785 1651 aa21.75■■□□□ 1.07
PPFIA1-207ENST00000526347 RSF1Q96T23 1441 aaPredicted RBP21.7■■□□□ 1.06
PPFIA1-207ENST00000526347 NESP48681 1621 aa21.62■■□□□ 1.05
PPFIA1-207ENST00000526347 ERCC6Q03468 1493 aa21.57■■□□□ 1.04
PPFIA1-207ENST00000526347 LAMC3Q9Y6N6 1575 aa21.56■■□□□ 1.04
PPFIA1-207ENST00000526347 TOP2AP11388 1531 aaKnown RBP21.54■■□□□ 1.04
PPFIA1-207ENST00000526347 CADPSQ9ULU8 1353 aa21.46■■□□□ 1.03
PPFIA1-207ENST00000526347 CUX2O14529 1486 aa21.44■■□□□ 1.02
PPFIA1-207ENST00000526347 PDS5BQ9NTI5 1447 aa21.39■■□□□ 1.02
PPFIA1-207ENST00000526347 THOC2Q8NI27 1593 aaKnown RBP21.37■■□□□ 1.01
PPFIA1-207ENST00000526347 KIF21AQ7Z4S6 1674 aa21.37■■□□□ 1.01
PPFIA1-207ENST00000526347 CFTRP13569 1480 aa21.32■■□□□ 1
PPFIA1-207ENST00000526347 CCDC88BA6NC98 1476 aa21.26■□□□□ 0.99
PPFIA1-207ENST00000526347 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
PPFIA1-207ENST00000526347 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
PPFIA1-207ENST00000526347 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
PPFIA1-207ENST00000526347 WDR62O43379 1518 aa21.17■□□□□ 0.98
PPFIA1-207ENST00000526347 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
PPFIA1-207ENST00000526347 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
PPFIA1-207ENST00000526347 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
PPFIA1-207ENST00000526347 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
PPFIA1-207ENST00000526347 TOPBP1Q92547 1522 aa20.86■□□□□ 0.93
PPFIA1-207ENST00000526347 ABCC8Q09428 1581 aa20.84■□□□□ 0.93
PPFIA1-207ENST00000526347 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.92
PPFIA1-207ENST00000526347 IFT140Q96RY7 1462 aa20.76■□□□□ 0.91
PPFIA1-207ENST00000526347 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
PPFIA1-207ENST00000526347 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
PPFIA1-207ENST00000526347 CUX1P39880 1505 aa20.66■□□□□ 0.9
PPFIA1-207ENST00000526347 TARBP1Q13395 1621 aaKnown RBP20.66■□□□□ 0.9
PPFIA1-207ENST00000526347 EIF4G3O43432 1585 aaKnown RBP20.61■□□□□ 0.89
PPFIA1-207ENST00000526347 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
PPFIA1-207ENST00000526347 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
PPFIA1-207ENST00000526347 SOGA1O94964 1423 aa20.56■□□□□ 0.88
PPFIA1-207ENST00000526347 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.885e-6■■■■□ 19.7
PPFIA1-207ENST00000526347 WDR97A6NE52 1622 aa20.49■□□□□ 0.87
PPFIA1-207ENST00000526347 OSCARQ8IYS5 282 aa20.46■□□□□ 0.87
PPFIA1-207ENST00000526347 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
PPFIA1-207ENST00000526347 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
PPFIA1-207ENST00000526347 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
PPFIA1-207ENST00000526347 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
PPFIA1-207ENST00000526347 SYNJ1O43426 1573 aa20.43■□□□□ 0.86
PPFIA1-207ENST00000526347 ABCA10Q8WWZ4 1543 aa20.41■□□□□ 0.86
PPFIA1-207ENST00000526347 GRIN2BQ13224 1484 aa20.36■□□□□ 0.85
PPFIA1-207ENST00000526347 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
PPFIA1-207ENST00000526347 CHD1O14646 1710 aa20.36■□□□□ 0.85
PPFIA1-207ENST00000526347 ABCA5Q8WWZ7 1642 aa20.35■□□□□ 0.85
PPFIA1-207ENST00000526347 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
PPFIA1-207ENST00000526347 MAGI1Q96QZ7 1491 aaPredicted RBP20.33■□□□□ 0.85
PPFIA1-207ENST00000526347 PBRM1Q86U86 1689 aa20.31■□□□□ 0.84
PPFIA1-207ENST00000526347 SYNJ2O15056 1496 aa20.25■□□□□ 0.83
PPFIA1-207ENST00000526347 FBLN2P98095 1184 aa20.25■□□□□ 0.83
PPFIA1-207ENST00000526347 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
PPFIA1-207ENST00000526347 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
PPFIA1-207ENST00000526347 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
PPFIA1-207ENST00000526347 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
PPFIA1-207ENST00000526347 ARHGEF11O15085 1522 aa20.18■□□□□ 0.82
PPFIA1-207ENST00000526347 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
PPFIA1-207ENST00000526347 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
PPFIA1-207ENST00000526347 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
PPFIA1-207ENST00000526347 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
PPFIA1-207ENST00000526347 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
PPFIA1-207ENST00000526347 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
PPFIA1-207ENST00000526347 NUP160Q12769 1436 aa20.04■□□□□ 0.8
PPFIA1-207ENST00000526347 KIF27Q86VH2 1401 aa20.02■□□□□ 0.8
PPFIA1-207ENST00000526347 ARAP1Q96P48 1450 aa20.02■□□□□ 0.8
PPFIA1-207ENST00000526347 CEP170Q5SW79 1584 aa20.02■□□□□ 0.8
PPFIA1-207ENST00000526347 IGF1RP08069 1367 aa19.96■□□□□ 0.79
PPFIA1-207ENST00000526347 CUL7Q14999 1698 aa19.94■□□□□ 0.78
PPFIA1-207ENST00000526347 CYB5RLQ6IPT4 315 aa19.94■□□□□ 0.78
PPFIA1-207ENST00000526347 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
PPFIA1-207ENST00000526347 RUSC2Q8N2Y8 1516 aa19.88■□□□□ 0.77
PPFIA1-207ENST00000526347 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
PPFIA1-207ENST00000526347 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms