RNA–Protein interactions for RNA: ENST00000526279.5

PDZD3-204, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-204ENST00000526279 NISCHQ9Y2I1 1504 aa35.53■■■■□ 3.28
PDZD3-204ENST00000526279 ABCC9O60706 1549 aa32.38■■■□□ 2.77
PDZD3-204ENST00000526279 CCDC180Q9P1Z9 1646 aa32.16■■■□□ 2.74
PDZD3-204ENST00000526279 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
PDZD3-204ENST00000526279 DNAJC5BQ9UF47 199 aa30.66■■■□□ 2.5
PDZD3-204ENST00000526279 NACADO15069 1562 aa30.41■■■□□ 2.46
PDZD3-204ENST00000526279 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
PDZD3-204ENST00000526279 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
PDZD3-204ENST00000526279 BICRAQ9NZM4 1560 aa29.9■■■□□ 2.38
PDZD3-204ENST00000526279 MYO15BQ96JP2 1530 aa29.89■■■□□ 2.38
PDZD3-204ENST00000526279 DCAF8L2P0C7V8 631 aa29.88■■■□□ 2.37
PDZD3-204ENST00000526279 SHROOM4Q9ULL8 1493 aa29.43■■■□□ 2.3
PDZD3-204ENST00000526279 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
PDZD3-204ENST00000526279 DCAF1Q9Y4B6 1507 aa29.37■■■□□ 2.29
PDZD3-204ENST00000526279 CC2D2AQ9P2K1 1620 aa29.3■■■□□ 2.28
PDZD3-204ENST00000526279 SCRIBQ14160 1630 aa29.22■■■□□ 2.27
PDZD3-204ENST00000526279 CECR2Q9BXF3 1484 aa29.21■■■□□ 2.27
PDZD3-204ENST00000526279 EIF4G1Q04637 1599 aaKnown RBP29.15■■■□□ 2.26
PDZD3-204ENST00000526279 DNAJC5Q9H3Z4 198 aa28.39■■■□□ 2.14
PDZD3-204ENST00000526279 CUX2O14529 1486 aa28.09■■■□□ 2.09
PDZD3-204ENST00000526279 NCAPD3P42695 1498 aa28.04■■■□□ 2.08
PDZD3-204ENST00000526279 ERCC6Q03468 1493 aa27.95■■■□□ 2.07
PDZD3-204ENST00000526279 ATAD2BQ9ULI0 1458 aa27.91■■■□□ 2.06
PDZD3-204ENST00000526279 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
PDZD3-204ENST00000526279 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
PDZD3-204ENST00000526279 SMARCA2P51531 1590 aa27.83■■■□□ 2.05
PDZD3-204ENST00000526279 NESP48681 1621 aa27.74■■■□□ 2.03
PDZD3-204ENST00000526279 THOC2Q8NI27 1593 aaKnown RBP27.64■■■□□ 2.01
PDZD3-204ENST00000526279 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
PDZD3-204ENST00000526279 BAZ1AQ9NRL2 1556 aaPredicted RBP27.61■■■□□ 2.01
PDZD3-204ENST00000526279 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
PDZD3-204ENST00000526279 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
PDZD3-204ENST00000526279 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
PDZD3-204ENST00000526279 MROH2BQ7Z745 1585 aa27.39■■□□□ 1.97
PDZD3-204ENST00000526279 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
PDZD3-204ENST00000526279 WDR62O43379 1518 aa27.14■■□□□ 1.94
PDZD3-204ENST00000526279 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
PDZD3-204ENST00000526279 CADPSQ9ULU8 1353 aa27.12■■□□□ 1.93
PDZD3-204ENST00000526279 WIZO95785 1651 aa27.06■■□□□ 1.92
PDZD3-204ENST00000526279 TRIM41Q8WV44 630 aa26.94■■□□□ 1.9
PDZD3-204ENST00000526279 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
PDZD3-204ENST00000526279 FANCD2Q9BXW9 1451 aa26.86■■□□□ 1.89
PDZD3-204ENST00000526279 CFTRP13569 1480 aa26.8■■□□□ 1.88
PDZD3-204ENST00000526279 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.87
PDZD3-204ENST00000526279 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
PDZD3-204ENST00000526279 PRDM2Q13029 1718 aa26.65■■□□□ 1.86
PDZD3-204ENST00000526279 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.85
PDZD3-204ENST00000526279 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
PDZD3-204ENST00000526279 RIMBP3CA6NJZ7 1639 aa26.49■■□□□ 1.83
PDZD3-204ENST00000526279 RIMBP3BA6NNM3 1639 aa26.49■■□□□ 1.83
PDZD3-204ENST00000526279 RIMBP3Q9UFD9 1639 aa26.49■■□□□ 1.83
PDZD3-204ENST00000526279 ZNF608Q9ULD9 1512 aaPredicted RBP26.42■■□□□ 1.82
PDZD3-204ENST00000526279 IFT140Q96RY7 1462 aa26.4■■□□□ 1.82
PDZD3-204ENST00000526279 ARHGEF11O15085 1522 aa26.34■■□□□ 1.81
PDZD3-204ENST00000526279 TOPBP1Q92547 1522 aa26.34■■□□□ 1.81
PDZD3-204ENST00000526279 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.81
PDZD3-204ENST00000526279 CCDC88BA6NC98 1476 aa26.33■■□□□ 1.81
PDZD3-204ENST00000526279 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
PDZD3-204ENST00000526279 CHD1O14646 1710 aa26.21■■□□□ 1.79
PDZD3-204ENST00000526279 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
PDZD3-204ENST00000526279 ABCC8Q09428 1581 aa26.2■■□□□ 1.78
PDZD3-204ENST00000526279 AQRO60306 1485 aaKnown RBP eCLIP26.08■■□□□ 1.77
PDZD3-204ENST00000526279 ARAP1Q96P48 1450 aa26.06■■□□□ 1.76
PDZD3-204ENST00000526279 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
PDZD3-204ENST00000526279 CYB5RLQ6IPT4 315 aa25.99■■□□□ 1.75
PDZD3-204ENST00000526279 RAD54L2Q9Y4B4 1467 aa25.91■■□□□ 1.74
PDZD3-204ENST00000526279 CLASP1Q7Z460 1538 aa25.89■■□□□ 1.74
PDZD3-204ENST00000526279 WDR97A6NE52 1622 aa25.89■■□□□ 1.74
PDZD3-204ENST00000526279 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
PDZD3-204ENST00000526279 FBLN2P98095 1184 aa25.84■■□□□ 1.73
PDZD3-204ENST00000526279 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
PDZD3-204ENST00000526279 SOGA1O94964 1423 aa25.82■■□□□ 1.72
PDZD3-204ENST00000526279 FGD5Q6ZNL6 1462 aa25.82■■□□□ 1.72
PDZD3-204ENST00000526279 TRHP20396 242 aaPredicted RBP25.78■■□□□ 1.72
PDZD3-204ENST00000526279 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
PDZD3-204ENST00000526279 MAGI1Q96QZ7 1491 aaPredicted RBP25.77■■□□□ 1.72
PDZD3-204ENST00000526279 CUX1P39880 1505 aa25.77■■□□□ 1.72
PDZD3-204ENST00000526279 GRIN2BQ13224 1484 aa25.7■■□□□ 1.7
PDZD3-204ENST00000526279 PBRM1Q86U86 1689 aa25.7■■□□□ 1.7
PDZD3-204ENST00000526279 SYNJ2O15056 1496 aa25.68■■□□□ 1.7
PDZD3-204ENST00000526279 CHMP7Q8WUX9 453 aaPredicted RBP25.61■■□□□ 1.69
PDZD3-204ENST00000526279 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
PDZD3-204ENST00000526279 GAPVD1Q14C86 1478 aa25.55■■□□□ 1.68
PDZD3-204ENST00000526279 ABCA10Q8WWZ4 1543 aa25.51■■□□□ 1.67
PDZD3-204ENST00000526279 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
PDZD3-204ENST00000526279 ADAMTS12P58397 1594 aa25.42■■□□□ 1.66
PDZD3-204ENST00000526279 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
PDZD3-204ENST00000526279 CEP170Q5SW79 1584 aa25.38■■□□□ 1.65
PDZD3-204ENST00000526279 SHROOM2Q13796 1616 aa25.34■■□□□ 1.65
PDZD3-204ENST00000526279 NUP160Q12769 1436 aa25.34■■□□□ 1.65
PDZD3-204ENST00000526279 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
PDZD3-204ENST00000526279 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
PDZD3-204ENST00000526279 TOP2BQ02880 1626 aa25.26■■□□□ 1.63
PDZD3-204ENST00000526279 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
PDZD3-204ENST00000526279 KIF13AQ9H1H9 1805 aa25.23■■□□□ 1.63
PDZD3-204ENST00000526279 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.63
PDZD3-204ENST00000526279 ERICH3Q5RHP9 1530 aa25.19■■□□□ 1.62
PDZD3-204ENST00000526279 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
PDZD3-204ENST00000526279 PRG4Q92954 1404 aaPredicted RBP25.05■■□□□ 1.6
PDZD3-204ENST00000526279 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms