RNA–Protein interactions for RNA: ENST00000526232.1

CPNE7-204, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-204ENST00000526232 NISCHQ9Y2I1 1504 aa44.45■■■■■ 4.71
CPNE7-204ENST00000526232 CCDC180Q9P1Z9 1646 aa39.69■■■■□ 3.94
CPNE7-204ENST00000526232 ABCC9O60706 1549 aa39.13■■■■□ 3.85
CPNE7-204ENST00000526232 RB1CC1Q8TDY2 1594 aa37.53■■■■□ 3.6
CPNE7-204ENST00000526232 NACADO15069 1562 aa37.39■■■■□ 3.58
CPNE7-204ENST00000526232 DCAF8L2P0C7V8 631 aa37.23■■■■□ 3.55
CPNE7-204ENST00000526232 MYO15BQ96JP2 1530 aa37.07■■■■□ 3.53
CPNE7-204ENST00000526232 ZCCHC6Q5VYS8 1495 aaKnown RBP36.98■■■■□ 3.51
CPNE7-204ENST00000526232 DCAF1Q9Y4B6 1507 aa36.78■■■■□ 3.48
CPNE7-204ENST00000526232 UNC13AQ9UPW8 1703 aa36.57■■■■□ 3.45
CPNE7-204ENST00000526232 PABPN1Q86U42 306 aaKnown RBP eCLIP36.47■■■■□ 3.43
CPNE7-204ENST00000526232 BICRAQ9NZM4 1560 aa36.35■■■■□ 3.41
CPNE7-204ENST00000526232 SCRIBQ14160 1630 aa36.18■■■■□ 3.38
CPNE7-204ENST00000526232 DNAJC5BQ9UF47 199 aa36.12■■■■□ 3.37
CPNE7-204ENST00000526232 SHROOM4Q9ULL8 1493 aa36.05■■■■□ 3.36
CPNE7-204ENST00000526232 EIF4G1Q04637 1599 aaKnown RBP35.46■■■■□ 3.27
CPNE7-204ENST00000526232 CC2D2AQ9P2K1 1620 aa35.38■■■■□ 3.25
CPNE7-204ENST00000526232 CECR2Q9BXF3 1484 aa35.22■■■■□ 3.23
CPNE7-204ENST00000526232 SMARCA4P51532 1647 aa34.57■■■■□ 3.12
CPNE7-204ENST00000526232 BAZ1AQ9NRL2 1556 aaPredicted RBP34.5■■■■□ 3.11
CPNE7-204ENST00000526232 NCAPD3P42695 1498 aa34.48■■■■□ 3.11
CPNE7-204ENST00000526232 ATAD2BQ9ULI0 1458 aa34.46■■■■□ 3.11
CPNE7-204ENST00000526232 SMARCA2P51531 1590 aa34.43■■■■□ 3.1
CPNE7-204ENST00000526232 HMGXB3Q12766 1538 aa34.33■■■■□ 3.09
CPNE7-204ENST00000526232 PEG3Q9GZU2 1588 aa34.23■■■■□ 3.07
CPNE7-204ENST00000526232 MROH2BQ7Z745 1585 aa34.23■■■■□ 3.07
CPNE7-204ENST00000526232 BAZ1BQ9UIG0 1483 aaKnown RBP34.19■■■■□ 3.06
CPNE7-204ENST00000526232 WIZO95785 1651 aa33.83■■■■□ 3.01
CPNE7-204ENST00000526232 ERCC6Q03468 1493 aa33.81■■■■□ 3
CPNE7-204ENST00000526232 NESP48681 1621 aa33.74■■■□□ 2.99
CPNE7-204ENST00000526232 RSF1Q96T23 1441 aaPredicted RBP33.72■■■□□ 2.99
CPNE7-204ENST00000526232 LAMC3Q9Y6N6 1575 aa33.65■■■□□ 2.98
CPNE7-204ENST00000526232 CUX2O14529 1486 aa33.56■■■□□ 2.96
CPNE7-204ENST00000526232 TOP2AP11388 1531 aaKnown RBP33.51■■■□□ 2.95
CPNE7-204ENST00000526232 CADPSQ9ULU8 1353 aa33.47■■■□□ 2.95
CPNE7-204ENST00000526232 PDS5BQ9NTI5 1447 aa33.45■■■□□ 2.94
CPNE7-204ENST00000526232 THOC2Q8NI27 1593 aaKnown RBP33.34■■■□□ 2.93
CPNE7-204ENST00000526232 KIF21AQ7Z4S6 1674 aa33.34■■■□□ 2.93
CPNE7-204ENST00000526232 CFTRP13569 1480 aa33.2■■■□□ 2.91
CPNE7-204ENST00000526232 MRC2Q9UBG0 1479 aa33.13■■■□□ 2.89
CPNE7-204ENST00000526232 CEP164Q9UPV0 1460 aa33.12■■■□□ 2.89
CPNE7-204ENST00000526232 FANCD2Q9BXW9 1451 aa33.1■■■□□ 2.89
CPNE7-204ENST00000526232 CCDC88BA6NC98 1476 aa33.06■■■□□ 2.88
CPNE7-204ENST00000526232 WDR62O43379 1518 aa33.03■■■□□ 2.88
CPNE7-204ENST00000526232 PRDM2Q13029 1718 aa32.91■■■□□ 2.86
CPNE7-204ENST00000526232 DNAJC5Q9H3Z4 198 aa32.85■■■□□ 2.85
CPNE7-204ENST00000526232 URB2Q14146 1524 aaKnown RBP32.77■■■□□ 2.84
CPNE7-204ENST00000526232 SUPT5HO00267 1087 aaKnown RBP32.59■■■□□ 2.81
CPNE7-204ENST00000526232 TOPBP1Q92547 1522 aa32.52■■■□□ 2.8
CPNE7-204ENST00000526232 ABCC8Q09428 1581 aa32.52■■■□□ 2.8
CPNE7-204ENST00000526232 DNMBPQ6XZF7 1577 aa32.48■■■□□ 2.79
CPNE7-204ENST00000526232 IFT140Q96RY7 1462 aa32.42■■■□□ 2.78
CPNE7-204ENST00000526232 ZNF608Q9ULD9 1512 aaPredicted RBP32.27■■■□□ 2.76
CPNE7-204ENST00000526232 POLA1P09884 1462 aaPredicted RBP32.23■■■□□ 2.75
CPNE7-204ENST00000526232 TARBP1Q13395 1621 aaKnown RBP32.18■■■□□ 2.74
CPNE7-204ENST00000526232 EIF4G3O43432 1585 aaKnown RBP32.17■■■□□ 2.74
CPNE7-204ENST00000526232 CUX1P39880 1505 aa32.14■■■□□ 2.74
CPNE7-204ENST00000526232 FGD5Q6ZNL6 1462 aa32.11■■■□□ 2.73
CPNE7-204ENST00000526232 SOGA1O94964 1423 aa32.07■■■□□ 2.72
CPNE7-204ENST00000526232 RAD54L2Q9Y4B4 1467 aa32.06■■■□□ 2.72
CPNE7-204ENST00000526232 OSCARQ8IYS5 282 aa32.06■■■□□ 2.72
CPNE7-204ENST00000526232 AQRO60306 1485 aaKnown RBP eCLIP32.03■■■□□ 2.722e-8■■■□□ 15.3
CPNE7-204ENST00000526232 WDR97A6NE52 1622 aa31.97■■■□□ 2.71
CPNE7-204ENST00000526232 TDRD9Q8NDG6 1382 aaKnown RBP31.93■■■□□ 2.7
CPNE7-204ENST00000526232 WRNQ14191 1432 aaPredicted RBP eCLIP31.83■■■□□ 2.69
CPNE7-204ENST00000526232 TOP2BQ02880 1626 aa31.79■■■□□ 2.68
CPNE7-204ENST00000526232 BIVM-ERCC5R4GMW8 1640 aa31.78■■■□□ 2.68
CPNE7-204ENST00000526232 CHD1O14646 1710 aa31.78■■■□□ 2.68
CPNE7-204ENST00000526232 ABCA10Q8WWZ4 1543 aa31.78■■■□□ 2.68
CPNE7-204ENST00000526232 SNAPC4Q5SXM2 1469 aa31.78■■■□□ 2.68
CPNE7-204ENST00000526232 GRIN2BQ13224 1484 aa31.77■■■□□ 2.68
CPNE7-204ENST00000526232 SYNJ1O43426 1573 aa31.76■■■□□ 2.67
CPNE7-204ENST00000526232 MAGI1Q96QZ7 1491 aaPredicted RBP31.73■■■□□ 2.67
CPNE7-204ENST00000526232 FBLN2P98095 1184 aa31.73■■■□□ 2.67
CPNE7-204ENST00000526232 GAPVD1Q14C86 1478 aa31.72■■■□□ 2.67
CPNE7-204ENST00000526232 ABCA5Q8WWZ7 1642 aa31.68■■■□□ 2.66
CPNE7-204ENST00000526232 PBRM1Q86U86 1689 aa31.66■■■□□ 2.66
CPNE7-204ENST00000526232 TRIM41Q8WV44 630 aa31.65■■■□□ 2.66
CPNE7-204ENST00000526232 SYNJ2O15056 1496 aa31.61■■■□□ 2.65
CPNE7-204ENST00000526232 CHMP7Q8WUX9 453 aaPredicted RBP31.6■■■□□ 2.65
CPNE7-204ENST00000526232 RIMBP3CA6NJZ7 1639 aa31.6■■■□□ 2.65
CPNE7-204ENST00000526232 RIMBP3BA6NNM3 1639 aa31.6■■■□□ 2.65
CPNE7-204ENST00000526232 RIMBP3Q9UFD9 1639 aa31.6■■■□□ 2.65
CPNE7-204ENST00000526232 ARHGEF11O15085 1522 aa31.58■■■□□ 2.65
CPNE7-204ENST00000526232 CLASP1Q7Z460 1538 aa31.47■■■□□ 2.63
CPNE7-204ENST00000526232 ADAMTS12P58397 1594 aa31.43■■■□□ 2.62
CPNE7-204ENST00000526232 ERICH3Q5RHP9 1530 aa31.4■■■□□ 2.62
CPNE7-204ENST00000526232 GRIN2AQ12879 1464 aa31.36■■■□□ 2.61
CPNE7-204ENST00000526232 FHAD1B1AJZ9 1412 aa31.34■■■□□ 2.61
CPNE7-204ENST00000526232 ARAP1Q96P48 1450 aa31.29■■■□□ 2.6
CPNE7-204ENST00000526232 CYB5RLQ6IPT4 315 aa31.25■■■□□ 2.59
CPNE7-204ENST00000526232 NUP160Q12769 1436 aa31.23■■■□□ 2.59
CPNE7-204ENST00000526232 KIF27Q86VH2 1401 aa31.2■■■□□ 2.59
CPNE7-204ENST00000526232 CEP170Q5SW79 1584 aa31.2■■■□□ 2.58
CPNE7-204ENST00000526232 CUL7Q14999 1698 aa31.06■■■□□ 2.56
CPNE7-204ENST00000526232 IGF1RP08069 1367 aa31.06■■■□□ 2.56
CPNE7-204ENST00000526232 SHROOM2Q13796 1616 aa31.02■■■□□ 2.56
CPNE7-204ENST00000526232 RUSC2Q8N2Y8 1516 aa30.98■■■□□ 2.55
CPNE7-204ENST00000526232 ERCC6L2Q5T890 1561 aa30.96■■■□□ 2.55
CPNE7-204ENST00000526232 CARMIL1Q5VZK9 1371 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms