RNA–Protein interactions for RNA: ENST00000526121.5

SYVN1-207, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-207ENST00000526121 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
SYVN1-207ENST00000526121 ABCC9O60706 1549 aa23.3■■□□□ 1.32
SYVN1-207ENST00000526121 CCDC180Q9P1Z9 1646 aa23.04■■□□□ 1.28
SYVN1-207ENST00000526121 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
SYVN1-207ENST00000526121 RB1CC1Q8TDY2 1594 aa22.08■■□□□ 1.12
SYVN1-207ENST00000526121 NACADO15069 1562 aa21.84■■□□□ 1.09
SYVN1-207ENST00000526121 PABPN1Q86U42 306 aaKnown RBP eCLIP21.6■■□□□ 1.05
SYVN1-207ENST00000526121 UNC13AQ9UPW8 1703 aa21.6■■□□□ 1.05
SYVN1-207ENST00000526121 DCAF8L2P0C7V8 631 aa21.57■■□□□ 1.04
SYVN1-207ENST00000526121 MYO15BQ96JP2 1530 aa21.43■■□□□ 1.02
SYVN1-207ENST00000526121 BICRAQ9NZM4 1560 aa21.41■■□□□ 1.02
SYVN1-207ENST00000526121 SHROOM4Q9ULL8 1493 aa21.14■□□□□ 0.98
SYVN1-207ENST00000526121 CC2D2AQ9P2K1 1620 aa21.06■□□□□ 0.96
SYVN1-207ENST00000526121 CECR2Q9BXF3 1484 aa21.04■□□□□ 0.96
SYVN1-207ENST00000526121 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
SYVN1-207ENST00000526121 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
SYVN1-207ENST00000526121 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
SYVN1-207ENST00000526121 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
SYVN1-207ENST00000526121 DNAJC5Q9H3Z4 198 aa20.58■□□□□ 0.89
SYVN1-207ENST00000526121 CUX2O14529 1486 aa20.26■□□□□ 0.83
SYVN1-207ENST00000526121 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
SYVN1-207ENST00000526121 NCAPD3P42695 1498 aa20.13■□□□□ 0.81
SYVN1-207ENST00000526121 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
SYVN1-207ENST00000526121 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
SYVN1-207ENST00000526121 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
SYVN1-207ENST00000526121 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
SYVN1-207ENST00000526121 NESP48681 1621 aa19.91■□□□□ 0.78
SYVN1-207ENST00000526121 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.76
SYVN1-207ENST00000526121 THOC2Q8NI27 1593 aaKnown RBP19.83■□□□□ 0.76
SYVN1-207ENST00000526121 BAZ1AQ9NRL2 1556 aaPredicted RBP19.79■□□□□ 0.76
SYVN1-207ENST00000526121 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
SYVN1-207ENST00000526121 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
SYVN1-207ENST00000526121 KIF21AQ7Z4S6 1674 aa19.7■□□□□ 0.74
SYVN1-207ENST00000526121 PDS5BQ9NTI5 1447 aa19.65■□□□□ 0.74
SYVN1-207ENST00000526121 MROH2BQ7Z745 1585 aa19.59■□□□□ 0.73
SYVN1-207ENST00000526121 TRIM41Q8WV44 630 aa19.54■□□□□ 0.72
SYVN1-207ENST00000526121 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
SYVN1-207ENST00000526121 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
SYVN1-207ENST00000526121 WDR62O43379 1518 aa19.47■□□□□ 0.71
SYVN1-207ENST00000526121 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
SYVN1-207ENST00000526121 WIZO95785 1651 aa19.35■□□□□ 0.69
SYVN1-207ENST00000526121 FANCD2Q9BXW9 1451 aa19.29■□□□□ 0.68
SYVN1-207ENST00000526121 OSCARQ8IYS5 282 aa19.24■□□□□ 0.67
SYVN1-207ENST00000526121 CFTRP13569 1480 aa19.22■□□□□ 0.67
SYVN1-207ENST00000526121 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
SYVN1-207ENST00000526121 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
SYVN1-207ENST00000526121 PRDM2Q13029 1718 aa19.08■□□□□ 0.64
SYVN1-207ENST00000526121 RIMBP3CA6NJZ7 1639 aa19.07■□□□□ 0.64
SYVN1-207ENST00000526121 RIMBP3BA6NNM3 1639 aa19.07■□□□□ 0.64
SYVN1-207ENST00000526121 RIMBP3Q9UFD9 1639 aa19.07■□□□□ 0.64
SYVN1-207ENST00000526121 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
SYVN1-207ENST00000526121 IFT140Q96RY7 1462 aa18.98■□□□□ 0.63
SYVN1-207ENST00000526121 ARHGEF11O15085 1522 aa18.96■□□□□ 0.63
SYVN1-207ENST00000526121 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
SYVN1-207ENST00000526121 TOPBP1Q92547 1522 aa18.89■□□□□ 0.61
SYVN1-207ENST00000526121 EIF4G3O43432 1585 aaKnown RBP18.88■□□□□ 0.61
SYVN1-207ENST00000526121 CCDC88BA6NC98 1476 aa18.85■□□□□ 0.61
SYVN1-207ENST00000526121 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
SYVN1-207ENST00000526121 CHD1O14646 1710 aa18.82■□□□□ 0.6
SYVN1-207ENST00000526121 DNMBPQ6XZF7 1577 aa18.81■□□□□ 0.6
SYVN1-207ENST00000526121 CYB5RLQ6IPT4 315 aa18.8■□□□□ 0.6
SYVN1-207ENST00000526121 TARBP1Q13395 1621 aaKnown RBP18.76■□□□□ 0.59
SYVN1-207ENST00000526121 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.594e-9■■■■□ 20.1
SYVN1-207ENST00000526121 ARAP1Q96P48 1450 aa18.74■□□□□ 0.59
SYVN1-207ENST00000526121 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
SYVN1-207ENST00000526121 FBLN2P98095 1184 aa18.68■□□□□ 0.58
SYVN1-207ENST00000526121 POLA1P09884 1462 aaPredicted RBP18.67■□□□□ 0.58
SYVN1-207ENST00000526121 WDR97A6NE52 1622 aa18.59■□□□□ 0.57
SYVN1-207ENST00000526121 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.57
SYVN1-207ENST00000526121 CLASP1Q7Z460 1538 aa18.57■□□□□ 0.56
SYVN1-207ENST00000526121 SOGA1O94964 1423 aa18.57■□□□□ 0.56
SYVN1-207ENST00000526121 SNAPC4Q5SXM2 1469 aa18.56■□□□□ 0.56
SYVN1-207ENST00000526121 TDRD9Q8NDG6 1382 aaKnown RBP18.55■□□□□ 0.56
SYVN1-207ENST00000526121 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
SYVN1-207ENST00000526121 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.55
SYVN1-207ENST00000526121 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
SYVN1-207ENST00000526121 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
SYVN1-207ENST00000526121 GRIN2BQ13224 1484 aa18.47■□□□□ 0.55
SYVN1-207ENST00000526121 SYNJ2O15056 1496 aa18.45■□□□□ 0.54
SYVN1-207ENST00000526121 AEBP2Q6ZN18 517 aaPredicted RBP18.43■□□□□ 0.54
SYVN1-207ENST00000526121 CUX1P39880 1505 aa18.43■□□□□ 0.54
SYVN1-207ENST00000526121 PBRM1Q86U86 1689 aa18.41■□□□□ 0.54
SYVN1-207ENST00000526121 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
SYVN1-207ENST00000526121 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
SYVN1-207ENST00000526121 ABCA10Q8WWZ4 1543 aa18.29■□□□□ 0.52
SYVN1-207ENST00000526121 GRIN2AQ12879 1464 aa18.23■□□□□ 0.51
SYVN1-207ENST00000526121 ERCC6L2Q5T890 1561 aa18.22■□□□□ 0.51
SYVN1-207ENST00000526121 CEP170Q5SW79 1584 aa18.2■□□□□ 0.5
SYVN1-207ENST00000526121 ADAMTS12P58397 1594 aa18.19■□□□□ 0.5
SYVN1-207ENST00000526121 NUP160Q12769 1436 aa18.18■□□□□ 0.5
SYVN1-207ENST00000526121 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
SYVN1-207ENST00000526121 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.49
SYVN1-207ENST00000526121 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
SYVN1-207ENST00000526121 FHAD1B1AJZ9 1412 aa18.11■□□□□ 0.49
SYVN1-207ENST00000526121 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
SYVN1-207ENST00000526121 TOP2BQ02880 1626 aa18.07■□□□□ 0.48
SYVN1-207ENST00000526121 ERICH3Q5RHP9 1530 aa18.06■□□□□ 0.48
SYVN1-207ENST00000526121 PRG4Q92954 1404 aaPredicted RBP18.02■□□□□ 0.48
SYVN1-207ENST00000526121 JPH4Q96JJ6 628 aa17.96■□□□□ 0.47
SYVN1-207ENST00000526121 ABCC10Q5T3U5 1492 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms