RNA–Protein interactions for RNA: ENST00000526118.1

CAPN11-203, Transcript of calpain 11, humanhuman

TSL 4

Gene CAPN11, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-203ENST00000526118 NISCHQ9Y2I1 1504 aa29.31■■■□□ 2.28
CAPN11-203ENST00000526118 ABCC9O60706 1549 aa27.14■■□□□ 1.94
CAPN11-203ENST00000526118 CCDC180Q9P1Z9 1646 aa26.58■■□□□ 1.85
CAPN11-203ENST00000526118 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
CAPN11-203ENST00000526118 RB1CC1Q8TDY2 1594 aa25.59■■□□□ 1.69
CAPN11-203ENST00000526118 NACADO15069 1562 aa25.26■■□□□ 1.63
CAPN11-203ENST00000526118 PABPN1Q86U42 306 aaKnown RBP eCLIP25.17■■□□□ 1.62
CAPN11-203ENST00000526118 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
CAPN11-203ENST00000526118 UNC13AQ9UPW8 1703 aa25■■□□□ 1.59
CAPN11-203ENST00000526118 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
CAPN11-203ENST00000526118 MYO15BQ96JP2 1530 aa24.68■■□□□ 1.54
CAPN11-203ENST00000526118 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
CAPN11-203ENST00000526118 CC2D2AQ9P2K1 1620 aa24.48■■□□□ 1.51
CAPN11-203ENST00000526118 SHROOM4Q9ULL8 1493 aa24.44■■□□□ 1.5
CAPN11-203ENST00000526118 EIF4G1Q04637 1599 aaKnown RBP24.28■■□□□ 1.48
CAPN11-203ENST00000526118 DNAJC5Q9H3Z4 198 aa24.23■■□□□ 1.47
CAPN11-203ENST00000526118 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
CAPN11-203ENST00000526118 ZCCHC6Q5VYS8 1495 aaKnown RBP24.17■■□□□ 1.46
CAPN11-203ENST00000526118 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
CAPN11-203ENST00000526118 CUX2O14529 1486 aa23.62■■□□□ 1.37
CAPN11-203ENST00000526118 ERCC6Q03468 1493 aa23.51■■□□□ 1.35
CAPN11-203ENST00000526118 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
CAPN11-203ENST00000526118 ATAD2BQ9ULI0 1458 aa23.15■■□□□ 1.3
CAPN11-203ENST00000526118 NESP48681 1621 aa23.13■■□□□ 1.29
CAPN11-203ENST00000526118 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
CAPN11-203ENST00000526118 HMGXB3Q12766 1538 aa23.09■■□□□ 1.29
CAPN11-203ENST00000526118 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
CAPN11-203ENST00000526118 THOC2Q8NI27 1593 aaKnown RBP23.01■■□□□ 1.27
CAPN11-203ENST00000526118 SMARCA4P51532 1647 aa23■■□□□ 1.27
CAPN11-203ENST00000526118 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
CAPN11-203ENST00000526118 LAMC3Q9Y6N6 1575 aa22.9■■□□□ 1.26
CAPN11-203ENST00000526118 KIF21AQ7Z4S6 1674 aa22.84■■□□□ 1.25
CAPN11-203ENST00000526118 BAZ1AQ9NRL2 1556 aaPredicted RBP22.82■■□□□ 1.24
CAPN11-203ENST00000526118 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
CAPN11-203ENST00000526118 PEG3Q9GZU2 1588 aa22.75■■□□□ 1.23
CAPN11-203ENST00000526118 MRC2Q9UBG0 1479 aa22.62■■□□□ 1.21
CAPN11-203ENST00000526118 CADPSQ9ULU8 1353 aa22.58■■□□□ 1.21
CAPN11-203ENST00000526118 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.2
CAPN11-203ENST00000526118 WDR62O43379 1518 aa22.57■■□□□ 1.2
CAPN11-203ENST00000526118 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
CAPN11-203ENST00000526118 CEP164Q9UPV0 1460 aa22.44■■□□□ 1.18
CAPN11-203ENST00000526118 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
CAPN11-203ENST00000526118 WIZO95785 1651 aa22.3■■□□□ 1.16
CAPN11-203ENST00000526118 RIMBP3CA6NJZ7 1639 aa22.22■■□□□ 1.15
CAPN11-203ENST00000526118 RIMBP3BA6NNM3 1639 aa22.22■■□□□ 1.15
CAPN11-203ENST00000526118 RIMBP3Q9UFD9 1639 aa22.22■■□□□ 1.15
CAPN11-203ENST00000526118 CFTRP13569 1480 aa22.19■■□□□ 1.14
CAPN11-203ENST00000526118 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
CAPN11-203ENST00000526118 ARHGEF11O15085 1522 aa22.08■■□□□ 1.13
CAPN11-203ENST00000526118 IFT140Q96RY7 1462 aa21.99■■□□□ 1.11
CAPN11-203ENST00000526118 CYB5RLQ6IPT4 315 aa21.99■■□□□ 1.11
CAPN11-203ENST00000526118 ZNF608Q9ULD9 1512 aaPredicted RBP21.99■■□□□ 1.11
CAPN11-203ENST00000526118 PRDM2Q13029 1718 aa21.98■■□□□ 1.11
CAPN11-203ENST00000526118 TOP2AP11388 1531 aaKnown RBP21.98■■□□□ 1.11
CAPN11-203ENST00000526118 TRHP20396 242 aaPredicted RBP21.97■■□□□ 1.11
CAPN11-203ENST00000526118 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
CAPN11-203ENST00000526118 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
CAPN11-203ENST00000526118 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
CAPN11-203ENST00000526118 CHD1O14646 1710 aa21.84■■□□□ 1.09
CAPN11-203ENST00000526118 ARAP1Q96P48 1450 aa21.82■■□□□ 1.08
CAPN11-203ENST00000526118 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
CAPN11-203ENST00000526118 FBLN2P98095 1184 aa21.78■■□□□ 1.08
CAPN11-203ENST00000526118 AEBP2Q6ZN18 517 aaPredicted RBP21.78■■□□□ 1.08
CAPN11-203ENST00000526118 AQRO60306 1485 aaKnown RBP eCLIP21.74■■□□□ 1.07
CAPN11-203ENST00000526118 DNMBPQ6XZF7 1577 aa21.73■■□□□ 1.07
CAPN11-203ENST00000526118 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
CAPN11-203ENST00000526118 TARBP1Q13395 1621 aaKnown RBP21.67■■□□□ 1.06
CAPN11-203ENST00000526118 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.04
CAPN11-203ENST00000526118 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
CAPN11-203ENST00000526118 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.03
CAPN11-203ENST00000526118 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.03
CAPN11-203ENST00000526118 TDRD9Q8NDG6 1382 aaKnown RBP21.51■■□□□ 1.03
CAPN11-203ENST00000526118 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
CAPN11-203ENST00000526118 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
CAPN11-203ENST00000526118 SOGA1O94964 1423 aa21.49■■□□□ 1.03
CAPN11-203ENST00000526118 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
CAPN11-203ENST00000526118 MAGI1Q96QZ7 1491 aaPredicted RBP21.43■■□□□ 1.02
CAPN11-203ENST00000526118 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.01
CAPN11-203ENST00000526118 GRIN2BQ13224 1484 aa21.37■■□□□ 1.01
CAPN11-203ENST00000526118 GAPVD1Q14C86 1478 aa21.37■■□□□ 1.01
CAPN11-203ENST00000526118 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
CAPN11-203ENST00000526118 PBRM1Q86U86 1689 aa21.28■■□□□ 1
CAPN11-203ENST00000526118 CUX1P39880 1505 aa21.25■□□□□ 0.99
CAPN11-203ENST00000526118 ERCC6L2Q5T890 1561 aa21.14■□□□□ 0.98
CAPN11-203ENST00000526118 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
CAPN11-203ENST00000526118 GRIN2AQ12879 1464 aa21.09■□□□□ 0.97
CAPN11-203ENST00000526118 CEP170Q5SW79 1584 aa21.09■□□□□ 0.97
CAPN11-203ENST00000526118 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
CAPN11-203ENST00000526118 KIF13AQ9H1H9 1805 aa21.06■□□□□ 0.96
CAPN11-203ENST00000526118 NUP160Q12769 1436 aa21.02■□□□□ 0.96
CAPN11-203ENST00000526118 ADAMTS12P58397 1594 aa21.01■□□□□ 0.95
CAPN11-203ENST00000526118 SHROOM2Q13796 1616 aa21■□□□□ 0.95
CAPN11-203ENST00000526118 FHAD1B1AJZ9 1412 aa20.93■□□□□ 0.94
CAPN11-203ENST00000526118 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.94
CAPN11-203ENST00000526118 FAM69CQ0P6D2 419 aa20.91■□□□□ 0.94
CAPN11-203ENST00000526118 PRG4Q92954 1404 aaPredicted RBP20.89■□□□□ 0.94
CAPN11-203ENST00000526118 NPM1P06748 294 aaKnown RBP eCLIP20.88■□□□□ 0.93
CAPN11-203ENST00000526118 ABCC10Q5T3U5 1492 aa20.86■□□□□ 0.93
CAPN11-203ENST00000526118 JPH4Q96JJ6 628 aa20.83■□□□□ 0.93
CAPN11-203ENST00000526118 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms