RNA–Protein interactions for RNA: ENST00000526070.2

DDX6-202, Transcript of DEAD-box helicase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX6, Length 1,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX6-202ENST00000526070 NISCHQ9Y2I1 1504 aa30.3■■■□□ 2.44
DDX6-202ENST00000526070 CCDC180Q9P1Z9 1646 aa27.07■■□□□ 1.92
DDX6-202ENST00000526070 ABCC9O60706 1549 aa26.75■■□□□ 1.87
DDX6-202ENST00000526070 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
DDX6-202ENST00000526070 NACADO15069 1562 aa25.52■■□□□ 1.68
DDX6-202ENST00000526070 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
DDX6-202ENST00000526070 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
DDX6-202ENST00000526070 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
DDX6-202ENST00000526070 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
DDX6-202ENST00000526070 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
DDX6-202ENST00000526070 PABPN1Q86U42 306 aaKnown RBP eCLIP24.94■■□□□ 1.58
DDX6-202ENST00000526070 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
DDX6-202ENST00000526070 DNAJC5BQ9UF47 199 aa24.86■■□□□ 1.57
DDX6-202ENST00000526070 SCRIBQ14160 1630 aa24.64■■□□□ 1.54
DDX6-202ENST00000526070 SHROOM4Q9ULL8 1493 aa24.6■■□□□ 1.53
DDX6-202ENST00000526070 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
DDX6-202ENST00000526070 CC2D2AQ9P2K1 1620 aa24.2■■□□□ 1.46
DDX6-202ENST00000526070 CECR2Q9BXF3 1484 aa24.08■■□□□ 1.45
DDX6-202ENST00000526070 NCAPD3P42695 1498 aa23.57■■□□□ 1.36
DDX6-202ENST00000526070 SMARCA4P51532 1647 aa23.57■■□□□ 1.36
DDX6-202ENST00000526070 ATAD2BQ9ULI0 1458 aa23.53■■□□□ 1.36
DDX6-202ENST00000526070 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
DDX6-202ENST00000526070 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
DDX6-202ENST00000526070 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
DDX6-202ENST00000526070 PEG3Q9GZU2 1588 aa23.37■■□□□ 1.33
DDX6-202ENST00000526070 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
DDX6-202ENST00000526070 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
DDX6-202ENST00000526070 NESP48681 1621 aa23.07■■□□□ 1.28
DDX6-202ENST00000526070 ERCC6Q03468 1493 aa23.06■■□□□ 1.28
DDX6-202ENST00000526070 WIZO95785 1651 aa23.06■■□□□ 1.28
DDX6-202ENST00000526070 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
DDX6-202ENST00000526070 CUX2O14529 1486 aa22.97■■□□□ 1.27
DDX6-202ENST00000526070 RSF1Q96T23 1441 aaPredicted RBP22.97■■□□□ 1.27
DDX6-202ENST00000526070 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
DDX6-202ENST00000526070 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
DDX6-202ENST00000526070 TOP2AP11388 1531 aaKnown RBP22.81■■□□□ 1.24
DDX6-202ENST00000526070 THOC2Q8NI27 1593 aaKnown RBP22.81■■□□□ 1.24
DDX6-202ENST00000526070 KIF21AQ7Z4S6 1674 aa22.78■■□□□ 1.24
DDX6-202ENST00000526070 CFTRP13569 1480 aa22.66■■□□□ 1.22
DDX6-202ENST00000526070 DNAJC5Q9H3Z4 198 aa22.63■■□□□ 1.21
DDX6-202ENST00000526070 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
DDX6-202ENST00000526070 FANCD2Q9BXW9 1451 aa22.57■■□□□ 1.2
DDX6-202ENST00000526070 CEP164Q9UPV0 1460 aa22.57■■□□□ 1.2
DDX6-202ENST00000526070 WDR62O43379 1518 aa22.57■■□□□ 1.2
DDX6-202ENST00000526070 CCDC88BA6NC98 1476 aa22.54■■□□□ 1.2
DDX6-202ENST00000526070 PRDM2Q13029 1718 aa22.43■■□□□ 1.18
DDX6-202ENST00000526070 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
DDX6-202ENST00000526070 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
DDX6-202ENST00000526070 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
DDX6-202ENST00000526070 DNMBPQ6XZF7 1577 aa22.14■■□□□ 1.13
DDX6-202ENST00000526070 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
DDX6-202ENST00000526070 SUPT5HO00267 1087 aaKnown RBP22.08■■□□□ 1.13
DDX6-202ENST00000526070 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
DDX6-202ENST00000526070 TARBP1Q13395 1621 aaKnown RBP21.99■■□□□ 1.11
DDX6-202ENST00000526070 POLA1P09884 1462 aaPredicted RBP21.98■■□□□ 1.11
DDX6-202ENST00000526070 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.1
DDX6-202ENST00000526070 OSCARQ8IYS5 282 aa21.94■■□□□ 1.1
DDX6-202ENST00000526070 CUX1P39880 1505 aa21.92■■□□□ 1.1
DDX6-202ENST00000526070 RAD54L2Q9Y4B4 1467 aa21.88■■□□□ 1.09
DDX6-202ENST00000526070 AQRO60306 1485 aaKnown RBP eCLIP21.88■■□□□ 1.092e-7■■■■□ 23.6
DDX6-202ENST00000526070 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
DDX6-202ENST00000526070 SOGA1O94964 1423 aa21.87■■□□□ 1.09
DDX6-202ENST00000526070 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
DDX6-202ENST00000526070 TDRD9Q8NDG6 1382 aaKnown RBP21.78■■□□□ 1.08
DDX6-202ENST00000526070 CHD1O14646 1710 aa21.72■■□□□ 1.07
DDX6-202ENST00000526070 TRIM41Q8WV44 630 aa21.69■■□□□ 1.06
DDX6-202ENST00000526070 SNAPC4Q5SXM2 1469 aa21.67■■□□□ 1.06
DDX6-202ENST00000526070 ABCA10Q8WWZ4 1543 aa21.66■■□□□ 1.06
DDX6-202ENST00000526070 GRIN2BQ13224 1484 aa21.66■■□□□ 1.06
DDX6-202ENST00000526070 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
DDX6-202ENST00000526070 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.06
DDX6-202ENST00000526070 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.06
DDX6-202ENST00000526070 RIMBP3CA6NJZ7 1639 aa21.64■■□□□ 1.05
DDX6-202ENST00000526070 RIMBP3BA6NNM3 1639 aa21.64■■□□□ 1.05
DDX6-202ENST00000526070 TOP2BQ02880 1626 aa21.64■■□□□ 1.05
DDX6-202ENST00000526070 RIMBP3Q9UFD9 1639 aa21.64■■□□□ 1.05
DDX6-202ENST00000526070 FBLN2P98095 1184 aa21.63■■□□□ 1.05
DDX6-202ENST00000526070 SYNJ1O43426 1573 aa21.62■■□□□ 1.05
DDX6-202ENST00000526070 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
DDX6-202ENST00000526070 ABCA5Q8WWZ7 1642 aa21.61■■□□□ 1.05
DDX6-202ENST00000526070 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
DDX6-202ENST00000526070 PBRM1Q86U86 1689 aa21.58■■□□□ 1.05
DDX6-202ENST00000526070 SYNJ2O15056 1496 aa21.56■■□□□ 1.04
DDX6-202ENST00000526070 CHMP7Q8WUX9 453 aaPredicted RBP21.54■■□□□ 1.04
DDX6-202ENST00000526070 CLASP1Q7Z460 1538 aa21.51■■□□□ 1.03
DDX6-202ENST00000526070 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
DDX6-202ENST00000526070 ADAMTS12P58397 1594 aa21.42■■□□□ 1.02
DDX6-202ENST00000526070 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.02
DDX6-202ENST00000526070 GRIN2AQ12879 1464 aa21.39■■□□□ 1.01
DDX6-202ENST00000526070 CYB5RLQ6IPT4 315 aa21.39■■□□□ 1.01
DDX6-202ENST00000526070 FHAD1B1AJZ9 1412 aa21.36■■□□□ 1.01
DDX6-202ENST00000526070 NUP160Q12769 1436 aa21.32■■□□□ 1
DDX6-202ENST00000526070 CEP170Q5SW79 1584 aa21.3■■□□□ 1
DDX6-202ENST00000526070 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
DDX6-202ENST00000526070 SHROOM2Q13796 1616 aa21.2■□□□□ 0.98
DDX6-202ENST00000526070 IGF1RP08069 1367 aa21.18■□□□□ 0.98
DDX6-202ENST00000526070 ERCC6L2Q5T890 1561 aa21.18■□□□□ 0.98
DDX6-202ENST00000526070 CUL7Q14999 1698 aa21.12■□□□□ 0.97
DDX6-202ENST00000526070 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
DDX6-202ENST00000526070 JPH4Q96JJ6 628 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms