RNA–Protein interactions for RNA: ENST00000526010.1

CTSF-204, Transcript of cathepsin F, humanhuman

TSL 4

Gene CTSF, Length 548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-204ENST00000526010 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
CTSF-204ENST00000526010 ABCC9O60706 1549 aa25.83■■□□□ 1.72
CTSF-204ENST00000526010 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
CTSF-204ENST00000526010 RB1CC1Q8TDY2 1594 aa24.58■■□□□ 1.52
CTSF-204ENST00000526010 DCAF8L2P0C7V8 631 aa24.55■■□□□ 1.52
CTSF-204ENST00000526010 NACADO15069 1562 aa24.42■■□□□ 1.5
CTSF-204ENST00000526010 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
CTSF-204ENST00000526010 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
CTSF-204ENST00000526010 MYO15BQ96JP2 1530 aa24.08■■□□□ 1.45
CTSF-204ENST00000526010 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
CTSF-204ENST00000526010 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
CTSF-204ENST00000526010 DCAF1Q9Y4B6 1507 aa23.82■■□□□ 1.4
CTSF-204ENST00000526010 BICRAQ9NZM4 1560 aa23.8■■□□□ 1.4
CTSF-204ENST00000526010 SCRIBQ14160 1630 aa23.62■■□□□ 1.37
CTSF-204ENST00000526010 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
CTSF-204ENST00000526010 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
CTSF-204ENST00000526010 EIF4G1Q04637 1599 aaKnown RBP23.25■■□□□ 1.31
CTSF-204ENST00000526010 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
CTSF-204ENST00000526010 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
CTSF-204ENST00000526010 ATAD2BQ9ULI0 1458 aa22.52■■□□□ 1.2
CTSF-204ENST00000526010 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
CTSF-204ENST00000526010 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
CTSF-204ENST00000526010 BAZ1AQ9NRL2 1556 aaPredicted RBP22.42■■□□□ 1.18
CTSF-204ENST00000526010 HMGXB3Q12766 1538 aa22.37■■□□□ 1.17
CTSF-204ENST00000526010 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
CTSF-204ENST00000526010 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
CTSF-204ENST00000526010 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
CTSF-204ENST00000526010 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
CTSF-204ENST00000526010 NESP48681 1621 aa22.19■■□□□ 1.14
CTSF-204ENST00000526010 CUX2O14529 1486 aa22.15■■□□□ 1.14
CTSF-204ENST00000526010 DNAJC5Q9H3Z4 198 aa22.05■■□□□ 1.12
CTSF-204ENST00000526010 LAMC3Q9Y6N6 1575 aa22.01■■□□□ 1.11
CTSF-204ENST00000526010 WIZO95785 1651 aa22■■□□□ 1.11
CTSF-204ENST00000526010 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
CTSF-204ENST00000526010 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
CTSF-204ENST00000526010 RSF1Q96T23 1441 aaPredicted RBP21.88■■□□□ 1.09
CTSF-204ENST00000526010 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
CTSF-204ENST00000526010 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
CTSF-204ENST00000526010 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
CTSF-204ENST00000526010 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
CTSF-204ENST00000526010 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
CTSF-204ENST00000526010 FANCD2Q9BXW9 1451 aa21.66■■□□□ 1.06
CTSF-204ENST00000526010 CFTRP13569 1480 aa21.65■■□□□ 1.06
CTSF-204ENST00000526010 WDR62O43379 1518 aa21.62■■□□□ 1.05
CTSF-204ENST00000526010 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
CTSF-204ENST00000526010 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
CTSF-204ENST00000526010 PRDM2Q13029 1718 aa21.34■■□□□ 1.01
CTSF-204ENST00000526010 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
CTSF-204ENST00000526010 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
CTSF-204ENST00000526010 TRIM41Q8WV44 630 aa21.24■□□□□ 0.99
CTSF-204ENST00000526010 IFT140Q96RY7 1462 aa21.23■□□□□ 0.99
CTSF-204ENST00000526010 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
CTSF-204ENST00000526010 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
CTSF-204ENST00000526010 DNMBPQ6XZF7 1577 aa21.17■□□□□ 0.98
CTSF-204ENST00000526010 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
CTSF-204ENST00000526010 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.96
CTSF-204ENST00000526010 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
CTSF-204ENST00000526010 EIF4G3O43432 1585 aaKnown RBP21.04■□□□□ 0.96
CTSF-204ENST00000526010 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
CTSF-204ENST00000526010 SOGA1O94964 1423 aa21■□□□□ 0.95
CTSF-204ENST00000526010 RAD54L2Q9Y4B4 1467 aa21■□□□□ 0.95
CTSF-204ENST00000526010 FBLN2P98095 1184 aa20.99■□□□□ 0.95
CTSF-204ENST00000526010 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
CTSF-204ENST00000526010 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
CTSF-204ENST00000526010 CUX1P39880 1505 aa20.92■□□□□ 0.94
CTSF-204ENST00000526010 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
CTSF-204ENST00000526010 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
CTSF-204ENST00000526010 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
CTSF-204ENST00000526010 CHD1O14646 1710 aa20.84■□□□□ 0.93
CTSF-204ENST00000526010 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
CTSF-204ENST00000526010 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
CTSF-204ENST00000526010 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
CTSF-204ENST00000526010 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
CTSF-204ENST00000526010 CYB5RLQ6IPT4 315 aa20.78■□□□□ 0.92
CTSF-204ENST00000526010 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
CTSF-204ENST00000526010 MAGI1Q96QZ7 1491 aaPredicted RBP20.74■□□□□ 0.91
CTSF-204ENST00000526010 GAPVD1Q14C86 1478 aa20.72■□□□□ 0.91
CTSF-204ENST00000526010 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
CTSF-204ENST00000526010 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
CTSF-204ENST00000526010 SYNJ2O15056 1496 aa20.68■□□□□ 0.9
CTSF-204ENST00000526010 SYNJ1O43426 1573 aa20.66■□□□□ 0.9
CTSF-204ENST00000526010 ARAP1Q96P48 1450 aa20.63■□□□□ 0.89
CTSF-204ENST00000526010 PBRM1Q86U86 1689 aa20.63■□□□□ 0.89
CTSF-204ENST00000526010 ABCA5Q8WWZ7 1642 aa20.6■□□□□ 0.89
CTSF-204ENST00000526010 CLASP1Q7Z460 1538 aa20.6■□□□□ 0.89
CTSF-204ENST00000526010 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
CTSF-204ENST00000526010 BIVM-ERCC5R4GMW8 1640 aa20.57■□□□□ 0.88
CTSF-204ENST00000526010 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
CTSF-204ENST00000526010 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
CTSF-204ENST00000526010 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
CTSF-204ENST00000526010 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
CTSF-204ENST00000526010 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
CTSF-204ENST00000526010 NUP160Q12769 1436 aa20.39■□□□□ 0.85
CTSF-204ENST00000526010 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
CTSF-204ENST00000526010 ERCC6L2Q5T890 1561 aa20.33■□□□□ 0.84
CTSF-204ENST00000526010 KIF27Q86VH2 1401 aa20.27■□□□□ 0.84
CTSF-204ENST00000526010 JPH4Q96JJ6 628 aa20.27■□□□□ 0.84
CTSF-204ENST00000526010 PRG4Q92954 1404 aaPredicted RBP20.26■□□□□ 0.83
CTSF-204ENST00000526010 SHROOM2Q13796 1616 aa20.24■□□□□ 0.83
CTSF-204ENST00000526010 IGF1RP08069 1367 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms