RNA–Protein interactions for RNA: ENST00000525906.1

TTC39A-214, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 5

Gene TTC39A, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-214ENST00000525906 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
TTC39A-214ENST00000525906 CCDC180Q9P1Z9 1646 aa32.77■■■□□ 2.84
TTC39A-214ENST00000525906 ABCC9O60706 1549 aa32.59■■■□□ 2.81
TTC39A-214ENST00000525906 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
TTC39A-214ENST00000525906 NACADO15069 1562 aa30.88■■■□□ 2.53
TTC39A-214ENST00000525906 DCAF8L2P0C7V8 631 aa30.6■■■□□ 2.49
TTC39A-214ENST00000525906 UNC13AQ9UPW8 1703 aa30.54■■■□□ 2.48
TTC39A-214ENST00000525906 MYO15BQ96JP2 1530 aa30.5■■■□□ 2.47
TTC39A-214ENST00000525906 DNAJC5BQ9UF47 199 aa30.49■■■□□ 2.47
TTC39A-214ENST00000525906 ZCCHC6Q5VYS8 1495 aaKnown RBP30.35■■■□□ 2.45
TTC39A-214ENST00000525906 PABPN1Q86U42 306 aaKnown RBP eCLIP30.32■■■□□ 2.44
TTC39A-214ENST00000525906 BICRAQ9NZM4 1560 aa30.28■■■□□ 2.44
TTC39A-214ENST00000525906 DCAF1Q9Y4B6 1507 aa30.18■■■□□ 2.42
TTC39A-214ENST00000525906 SCRIBQ14160 1630 aa29.89■■■□□ 2.37
TTC39A-214ENST00000525906 SHROOM4Q9ULL8 1493 aa29.73■■■□□ 2.35
TTC39A-214ENST00000525906 CC2D2AQ9P2K1 1620 aa29.48■■■□□ 2.31
TTC39A-214ENST00000525906 EIF4G1Q04637 1599 aaKnown RBP29.45■■■□□ 2.31
TTC39A-214ENST00000525906 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
TTC39A-214ENST00000525906 SMARCA4P51532 1647 aa28.52■■■□□ 2.16
TTC39A-214ENST00000525906 NCAPD3P42695 1498 aa28.5■■■□□ 2.15
TTC39A-214ENST00000525906 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
TTC39A-214ENST00000525906 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
TTC39A-214ENST00000525906 HMGXB3Q12766 1538 aa28.34■■■□□ 2.13
TTC39A-214ENST00000525906 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.12
TTC39A-214ENST00000525906 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
TTC39A-214ENST00000525906 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
TTC39A-214ENST00000525906 BAZ1BQ9UIG0 1483 aaKnown RBP28.16■■■□□ 2.1
TTC39A-214ENST00000525906 NESP48681 1621 aa28.1■■■□□ 2.09
TTC39A-214ENST00000525906 ERCC6Q03468 1493 aa28.04■■■□□ 2.08
TTC39A-214ENST00000525906 CUX2O14529 1486 aa27.97■■■□□ 2.07
TTC39A-214ENST00000525906 WIZO95785 1651 aa27.9■■■□□ 2.06
TTC39A-214ENST00000525906 LAMC3Q9Y6N6 1575 aa27.85■■■□□ 2.05
TTC39A-214ENST00000525906 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
TTC39A-214ENST00000525906 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
TTC39A-214ENST00000525906 DNAJC5Q9H3Z4 198 aa27.77■■■□□ 2.04
TTC39A-214ENST00000525906 RSF1Q96T23 1441 aaPredicted RBP27.63■■■□□ 2.01
TTC39A-214ENST00000525906 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
TTC39A-214ENST00000525906 PDS5BQ9NTI5 1447 aa27.59■■■□□ 2.01
TTC39A-214ENST00000525906 TOP2AP11388 1531 aaKnown RBP27.51■■□□□ 1.99
TTC39A-214ENST00000525906 MRC2Q9UBG0 1479 aa27.43■■□□□ 1.98
TTC39A-214ENST00000525906 WDR62O43379 1518 aa27.4■■□□□ 1.98
TTC39A-214ENST00000525906 CFTRP13569 1480 aa27.37■■□□□ 1.97
TTC39A-214ENST00000525906 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
TTC39A-214ENST00000525906 CEP164Q9UPV0 1460 aa27.33■■□□□ 1.97
TTC39A-214ENST00000525906 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
TTC39A-214ENST00000525906 CCDC88BA6NC98 1476 aa27.18■■□□□ 1.94
TTC39A-214ENST00000525906 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
TTC39A-214ENST00000525906 TOPBP1Q92547 1522 aa26.86■■□□□ 1.89
TTC39A-214ENST00000525906 ZNF608Q9ULD9 1512 aaPredicted RBP26.8■■□□□ 1.88
TTC39A-214ENST00000525906 DNMBPQ6XZF7 1577 aa26.78■■□□□ 1.88
TTC39A-214ENST00000525906 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
TTC39A-214ENST00000525906 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
TTC39A-214ENST00000525906 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
TTC39A-214ENST00000525906 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
TTC39A-214ENST00000525906 OSCARQ8IYS5 282 aa26.62■■□□□ 1.85
TTC39A-214ENST00000525906 POLA1P09884 1462 aaPredicted RBP26.61■■□□□ 1.85
TTC39A-214ENST00000525906 TRIM41Q8WV44 630 aa26.58■■□□□ 1.85
TTC39A-214ENST00000525906 AQRO60306 1485 aaKnown RBP eCLIP26.53■■□□□ 1.84
TTC39A-214ENST00000525906 CUX1P39880 1505 aa26.5■■□□□ 1.83
TTC39A-214ENST00000525906 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
TTC39A-214ENST00000525906 CHD1O14646 1710 aa26.49■■□□□ 1.83
TTC39A-214ENST00000525906 RIMBP3CA6NJZ7 1639 aa26.46■■□□□ 1.83
TTC39A-214ENST00000525906 RIMBP3BA6NNM3 1639 aa26.46■■□□□ 1.83
TTC39A-214ENST00000525906 RIMBP3Q9UFD9 1639 aa26.46■■□□□ 1.83
TTC39A-214ENST00000525906 FGD5Q6ZNL6 1462 aa26.45■■□□□ 1.82
TTC39A-214ENST00000525906 SOGA1O94964 1423 aa26.4■■□□□ 1.82
TTC39A-214ENST00000525906 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
TTC39A-214ENST00000525906 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
TTC39A-214ENST00000525906 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
TTC39A-214ENST00000525906 ARHGEF11O15085 1522 aa26.35■■□□□ 1.81
TTC39A-214ENST00000525906 SNAPC4Q5SXM2 1469 aa26.27■■□□□ 1.8
TTC39A-214ENST00000525906 PBRM1Q86U86 1689 aa26.21■■□□□ 1.79
TTC39A-214ENST00000525906 FBLN2P98095 1184 aa26.2■■□□□ 1.78
TTC39A-214ENST00000525906 GRIN2BQ13224 1484 aa26.17■■□□□ 1.78
TTC39A-214ENST00000525906 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
TTC39A-214ENST00000525906 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
TTC39A-214ENST00000525906 CLASP1Q7Z460 1538 aa26.16■■□□□ 1.78
TTC39A-214ENST00000525906 ABCA10Q8WWZ4 1543 aa26.14■■□□□ 1.78
TTC39A-214ENST00000525906 ARAP1Q96P48 1450 aa26.13■■□□□ 1.77
TTC39A-214ENST00000525906 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
TTC39A-214ENST00000525906 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
TTC39A-214ENST00000525906 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
TTC39A-214ENST00000525906 TOP2BQ02880 1626 aa26.09■■□□□ 1.77
TTC39A-214ENST00000525906 SYNJ2O15056 1496 aa26.09■■□□□ 1.77
TTC39A-214ENST00000525906 CYB5RLQ6IPT4 315 aa26.03■■□□□ 1.76
TTC39A-214ENST00000525906 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.75
TTC39A-214ENST00000525906 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
TTC39A-214ENST00000525906 ADAMTS12P58397 1594 aa25.95■■□□□ 1.74
TTC39A-214ENST00000525906 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
TTC39A-214ENST00000525906 CEP170Q5SW79 1584 aa25.85■■□□□ 1.73
TTC39A-214ENST00000525906 ERCC6L2Q5T890 1561 aa25.82■■□□□ 1.72
TTC39A-214ENST00000525906 ERICH3Q5RHP9 1530 aa25.8■■□□□ 1.72
TTC39A-214ENST00000525906 NUP160Q12769 1436 aa25.79■■□□□ 1.72
TTC39A-214ENST00000525906 FHAD1B1AJZ9 1412 aa25.76■■□□□ 1.71
TTC39A-214ENST00000525906 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
TTC39A-214ENST00000525906 TRHP20396 242 aaPredicted RBP25.63■■□□□ 1.69
TTC39A-214ENST00000525906 RUSC2Q8N2Y8 1516 aa25.59■■□□□ 1.69
TTC39A-214ENST00000525906 IGF1RP08069 1367 aa25.49■■□□□ 1.67
TTC39A-214ENST00000525906 PRG4Q92954 1404 aaPredicted RBP25.48■■□□□ 1.67
TTC39A-214ENST00000525906 CUL7Q14999 1698 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms