RNA–Protein interactions for RNA: ENST00000525895.5

C11orf49-207, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 1,527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-207ENST00000525895 NISCHQ9Y2I1 1504 aa40.23■■■■■ 4.03
C11orf49-207ENST00000525895 CCDC180Q9P1Z9 1646 aa35.12■■■■□ 3.21
C11orf49-207ENST00000525895 ZCCHC6Q5VYS8 1495 aaKnown RBP33.84■■■■□ 3.01
C11orf49-207ENST00000525895 DCAF1Q9Y4B6 1507 aa33.36■■■□□ 2.93
C11orf49-207ENST00000525895 DCAF8L2P0C7V8 631 aa32.95■■■□□ 2.87
C11orf49-207ENST00000525895 MYO15BQ96JP2 1530 aa32.92■■■□□ 2.86
C11orf49-207ENST00000525895 ABCC9O60706 1549 aa32.83■■■□□ 2.85
C11orf49-207ENST00000525895 SHROOM4Q9ULL8 1493 aa32.75■■■□□ 2.83
C11orf49-207ENST00000525895 NACADO15069 1562 aa32.61■■■□□ 2.81
C11orf49-207ENST00000525895 RB1CC1Q8TDY2 1594 aa32.27■■■□□ 2.76
C11orf49-207ENST00000525895 SCRIBQ14160 1630 aa32.16■■■□□ 2.74
C11orf49-207ENST00000525895 UNC13AQ9UPW8 1703 aa31.66■■■□□ 2.66
C11orf49-207ENST00000525895 SUPT5HO00267 1087 aaKnown RBP31.6■■■□□ 2.65
C11orf49-207ENST00000525895 BICRAQ9NZM4 1560 aa31.26■■■□□ 2.6
C11orf49-207ENST00000525895 RSF1Q96T23 1441 aaPredicted RBP31.22■■■□□ 2.59
C11orf49-207ENST00000525895 CECR2Q9BXF3 1484 aa31.16■■■□□ 2.58
C11orf49-207ENST00000525895 BAZ1AQ9NRL2 1556 aaPredicted RBP31.08■■■□□ 2.57
C11orf49-207ENST00000525895 MROH2BQ7Z745 1585 aa31.04■■■□□ 2.56
C11orf49-207ENST00000525895 PABPN1Q86U42 306 aaKnown RBP eCLIP30.92■■■□□ 2.54
C11orf49-207ENST00000525895 SMARCA4P51532 1647 aa30.91■■■□□ 2.54
C11orf49-207ENST00000525895 WIZO95785 1651 aa30.82■■■□□ 2.52
C11orf49-207ENST00000525895 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
C11orf49-207ENST00000525895 TOP2AP11388 1531 aaKnown RBP30.55■■■□□ 2.48
C11orf49-207ENST00000525895 CHIC1Q5VXU3 224 aa30.42■■■□□ 2.46
C11orf49-207ENST00000525895 SMARCA2P51531 1590 aa30.36■■■□□ 2.45
C11orf49-207ENST00000525895 ATAD2BQ9ULI0 1458 aa30.31■■■□□ 2.44
C11orf49-207ENST00000525895 EIF4G1Q04637 1599 aaKnown RBP30.3■■■□□ 2.44
C11orf49-207ENST00000525895 CCDC88BA6NC98 1476 aa30.17■■■□□ 2.42
C11orf49-207ENST00000525895 BAZ1BQ9UIG0 1483 aaKnown RBP30.16■■■□□ 2.42
C11orf49-207ENST00000525895 HMGXB3Q12766 1538 aa30.08■■■□□ 2.41
C11orf49-207ENST00000525895 NCAPD3P42695 1498 aa30.05■■■□□ 2.4
C11orf49-207ENST00000525895 CC2D2AQ9P2K1 1620 aa29.8■■■□□ 2.36
C11orf49-207ENST00000525895 TRIM41Q8WV44 630 aa29.76■■■□□ 2.36
C11orf49-207ENST00000525895 ABCC8Q09428 1581 aa29.58■■■□□ 2.33
C11orf49-207ENST00000525895 CFTRP13569 1480 aa29.43■■■□□ 2.3
C11orf49-207ENST00000525895 PRDM2Q13029 1718 aa29.43■■■□□ 2.3
C11orf49-207ENST00000525895 WRNQ14191 1432 aaPredicted RBP eCLIP29.41■■■□□ 2.3
C11orf49-207ENST00000525895 SYNJ1O43426 1573 aa29.28■■■□□ 2.28
C11orf49-207ENST00000525895 CADPSQ9ULU8 1353 aa29.26■■■□□ 2.27
C11orf49-207ENST00000525895 TOP2BQ02880 1626 aa29.2■■■□□ 2.27
C11orf49-207ENST00000525895 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.27
C11orf49-207ENST00000525895 LOC105371045A0A1W2PR82 267 aa29.17■■■□□ 2.26
C11orf49-207ENST00000525895 EEA1Q15075 1411 aa29.15■■■□□ 2.26
C11orf49-207ENST00000525895 FAM9AQ8IZU1 332 aaPredicted RBP29.13■■■□□ 2.25
C11orf49-207ENST00000525895 LAMC3Q9Y6N6 1575 aa29.04■■■□□ 2.24
C11orf49-207ENST00000525895 SOGA1O94964 1423 aa29.03■■■□□ 2.24
C11orf49-207ENST00000525895 CUX1P39880 1505 aa29.02■■■□□ 2.24
C11orf49-207ENST00000525895 FANCD2Q9BXW9 1451 aa28.94■■■□□ 2.22
C11orf49-207ENST00000525895 RUSC2Q8N2Y8 1516 aa28.9■■■□□ 2.22
C11orf49-207ENST00000525895 NESP48681 1621 aa28.88■■■□□ 2.21
C11orf49-207ENST00000525895 CSRNP3Q8WYN3 585 aa28.86■■■□□ 2.21
C11orf49-207ENST00000525895 DNAJC5BQ9UF47 199 aa28.79■■■□□ 2.2
C11orf49-207ENST00000525895 KIF21BO75037 1637 aa28.77■■■□□ 2.2
C11orf49-207ENST00000525895 DNMBPQ6XZF7 1577 aa28.76■■■□□ 2.2
C11orf49-207ENST00000525895 PDS5BQ9NTI5 1447 aa28.76■■■□□ 2.19
C11orf49-207ENST00000525895 CEP164Q9UPV0 1460 aa28.75■■■□□ 2.19
C11orf49-207ENST00000525895 GOLGA3Q08378 1498 aa28.71■■■□□ 2.19
C11orf49-207ENST00000525895 FGD5Q6ZNL6 1462 aa28.68■■■□□ 2.18
C11orf49-207ENST00000525895 TOPBP1Q92547 1522 aa28.66■■■□□ 2.18
C11orf49-207ENST00000525895 KIF27Q86VH2 1401 aa28.66■■■□□ 2.18
C11orf49-207ENST00000525895 KIF21AQ7Z4S6 1674 aa28.64■■■□□ 2.18
C11orf49-207ENST00000525895 TNIKQ9UKE5 1360 aa28.64■■■□□ 2.18
C11orf49-207ENST00000525895 EHMT2Q96KQ7 1210 aa28.63■■■□□ 2.17
C11orf49-207ENST00000525895 URB2Q14146 1524 aaKnown RBP28.56■■■□□ 2.16
C11orf49-207ENST00000525895 ERICH3Q5RHP9 1530 aa28.55■■■□□ 2.16
C11orf49-207ENST00000525895 POLA1P09884 1462 aaPredicted RBP28.53■■■□□ 2.16
C11orf49-207ENST00000525895 PRXQ9BXM0 1461 aa28.52■■■□□ 2.16
C11orf49-207ENST00000525895 CUX2O14529 1486 aa28.5■■■□□ 2.15
C11orf49-207ENST00000525895 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
C11orf49-207ENST00000525895 CEP162Q5TB80 1403 aa28.46■■■□□ 2.15
C11orf49-207ENST00000525895 RAPGEF2Q9Y4G8 1499 aa28.46■■■□□ 2.15
C11orf49-207ENST00000525895 UBTFP17480 764 aaKnown RBP28.46■■■□□ 2.15
C11orf49-207ENST00000525895 WDR97A6NE52 1622 aa28.42■■■□□ 2.14
C11orf49-207ENST00000525895 MRC2Q9UBG0 1479 aa28.38■■■□□ 2.13
C11orf49-207ENST00000525895 RAD54L2Q9Y4B4 1467 aa28.37■■■□□ 2.13
C11orf49-207ENST00000525895 IGF1RP08069 1367 aa28.34■■■□□ 2.13
C11orf49-207ENST00000525895 WDR62O43379 1518 aa28.26■■■□□ 2.11
C11orf49-207ENST00000525895 ABCA5Q8WWZ7 1642 aa28.25■■■□□ 2.11
C11orf49-207ENST00000525895 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
C11orf49-207ENST00000525895 CUL7Q14999 1698 aa28.24■■■□□ 2.11
C11orf49-207ENST00000525895 CLIP1P30622 1438 aa28.22■■■□□ 2.11
C11orf49-207ENST00000525895 CARMIL1Q5VZK9 1371 aa28.21■■■□□ 2.11
C11orf49-207ENST00000525895 ERCC6Q03468 1493 aa28.16■■■□□ 2.1
C11orf49-207ENST00000525895 THOC2Q8NI27 1593 aaKnown RBP28.14■■■□□ 2.09
C11orf49-207ENST00000525895 GAPVD1Q14C86 1478 aa28.12■■■□□ 2.09
C11orf49-207ENST00000525895 TRIM26Q12899 539 aaPredicted RBP28.09■■■□□ 2.09
C11orf49-207ENST00000525895 IFT140Q96RY7 1462 aa28.07■■■□□ 2.08
C11orf49-207ENST00000525895 TDRD9Q8NDG6 1382 aaKnown RBP28.06■■■□□ 2.08
C11orf49-207ENST00000525895 PCGF6Q9BYE7 350 aa28.03■■■□□ 2.08
C11orf49-207ENST00000525895 PBRM1Q86U86 1689 aa28.03■■■□□ 2.08
C11orf49-207ENST00000525895 VPS8Q8N3P4 1428 aa28.02■■■□□ 2.08
C11orf49-207ENST00000525895 CTTNBP2Q8WZ74 1663 aa27.96■■■□□ 2.07
C11orf49-207ENST00000525895 ARAP1Q96P48 1450 aa27.93■■■□□ 2.06
C11orf49-207ENST00000525895 GRIN2BQ13224 1484 aa27.89■■■□□ 2.06
C11orf49-207ENST00000525895 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.06
C11orf49-207ENST00000525895 AQRO60306 1485 aaKnown RBP eCLIP27.87■■■□□ 2.05
C11orf49-207ENST00000525895 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
C11orf49-207ENST00000525895 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
C11orf49-207ENST00000525895 ZNF608Q9ULD9 1512 aaPredicted RBP27.83■■■□□ 2.05
C11orf49-207ENST00000525895 RANGAP1P46060 587 aaPredicted RBP27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms