RNA–Protein interactions for RNA: ENST00000525835.5

SOX6-206, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-206ENST00000525835 NISCHQ9Y2I1 1504 aa55.97■■■■■ 6.55
SOX6-206ENST00000525835 CCDC180Q9P1Z9 1646 aa49.89■■■■■ 5.58
SOX6-206ENST00000525835 ABCC9O60706 1549 aa48.85■■■■■ 5.41
SOX6-206ENST00000525835 RB1CC1Q8TDY2 1594 aa47■■■■■ 5.11
SOX6-206ENST00000525835 NACADO15069 1562 aa46.93■■■■■ 5.1
SOX6-206ENST00000525835 DCAF8L2P0C7V8 631 aa46.67■■■■■ 5.06
SOX6-206ENST00000525835 MYO15BQ96JP2 1530 aa46.64■■■■■ 5.06
SOX6-206ENST00000525835 ZCCHC6Q5VYS8 1495 aaKnown RBP46.6■■■■■ 5.05
SOX6-206ENST00000525835 DCAF1Q9Y4B6 1507 aa46.37■■■■■ 5.01
SOX6-206ENST00000525835 UNC13AQ9UPW8 1703 aa45.94■■■■■ 4.94
SOX6-206ENST00000525835 BICRAQ9NZM4 1560 aa45.58■■■■■ 4.89
SOX6-206ENST00000525835 PABPN1Q86U42 306 aaKnown RBP eCLIP45.58■■■■■ 4.89
SOX6-206ENST00000525835 SCRIBQ14160 1630 aa45.41■■■■■ 4.86
SOX6-206ENST00000525835 SHROOM4Q9ULL8 1493 aa45.17■■■■■ 4.82
SOX6-206ENST00000525835 DNAJC5BQ9UF47 199 aa44.97■■■■■ 4.79
SOX6-206ENST00000525835 EIF4G1Q04637 1599 aaKnown RBP44.39■■■■■ 4.7
SOX6-206ENST00000525835 CC2D2AQ9P2K1 1620 aa44.23■■■■■ 4.67
SOX6-206ENST00000525835 CECR2Q9BXF3 1484 aa43.95■■■■■ 4.63
SOX6-206ENST00000525835 SMARCA4P51532 1647 aa43.47■■■■■ 4.55
SOX6-206ENST00000525835 BAZ1AQ9NRL2 1556 aaPredicted RBP43.4■■■■■ 4.54
SOX6-206ENST00000525835 NCAPD3P42695 1498 aa43.29■■■■■ 4.52
SOX6-206ENST00000525835 ATAD2BQ9ULI0 1458 aa43.26■■■■■ 4.52
SOX6-206ENST00000525835 SMARCA2P51531 1590 aa43.23■■■■■ 4.51
SOX6-206ENST00000525835 MROH2BQ7Z745 1585 aa43.1■■■■■ 4.49
SOX6-206ENST00000525835 PEG3Q9GZU2 1588 aa43.1■■■■■ 4.49
SOX6-206ENST00000525835 HMGXB3Q12766 1538 aa43.07■■■■■ 4.49
SOX6-206ENST00000525835 BAZ1BQ9UIG0 1483 aaKnown RBP42.88■■■■■ 4.46
SOX6-206ENST00000525835 WIZO95785 1651 aa42.63■■■■■ 4.41
SOX6-206ENST00000525835 RSF1Q96T23 1441 aaPredicted RBP42.55■■■■■ 4.4
SOX6-206ENST00000525835 NESP48681 1621 aa42.23■■■■■ 4.35
SOX6-206ENST00000525835 TOP2AP11388 1531 aaKnown RBP42.2■■■■■ 4.35
SOX6-206ENST00000525835 LAMC3Q9Y6N6 1575 aa42.18■■■■■ 4.34
SOX6-206ENST00000525835 ERCC6Q03468 1493 aa42.13■■■■■ 4.34
SOX6-206ENST00000525835 CADPSQ9ULU8 1353 aa41.99■■■■■ 4.31
SOX6-206ENST00000525835 PDS5BQ9NTI5 1447 aa41.87■■■■■ 4.29
SOX6-206ENST00000525835 CUX2O14529 1486 aa41.81■■■■■ 4.28
SOX6-206ENST00000525835 KIF21AQ7Z4S6 1674 aa41.77■■■■■ 4.28
SOX6-206ENST00000525835 CFTRP13569 1480 aa41.73■■■■■ 4.27
SOX6-206ENST00000525835 THOC2Q8NI27 1593 aaKnown RBP41.69■■■■■ 4.26
SOX6-206ENST00000525835 CCDC88BA6NC98 1476 aa41.67■■■■■ 4.26
SOX6-206ENST00000525835 FANCD2Q9BXW9 1451 aa41.5■■■■■ 4.23
SOX6-206ENST00000525835 CEP164Q9UPV0 1460 aa41.47■■■■■ 4.23
SOX6-206ENST00000525835 MRC2Q9UBG0 1479 aa41.46■■■■■ 4.23
SOX6-206ENST00000525835 PRDM2Q13029 1718 aa41.44■■■■■ 4.22
SOX6-206ENST00000525835 WDR62O43379 1518 aa41.35■■■■■ 4.21
SOX6-206ENST00000525835 SUPT5HO00267 1087 aaKnown RBP41.23■■■■■ 4.19
SOX6-206ENST00000525835 URB2Q14146 1524 aaKnown RBP41.09■■■■■ 4.17
SOX6-206ENST00000525835 ABCC8Q09428 1581 aa40.86■■■■■ 4.13
SOX6-206ENST00000525835 TOPBP1Q92547 1522 aa40.83■■■■■ 4.13
SOX6-206ENST00000525835 DNMBPQ6XZF7 1577 aa40.78■■■■■ 4.12
SOX6-206ENST00000525835 DNAJC5Q9H3Z4 198 aa40.68■■■■■ 4.1
SOX6-206ENST00000525835 IFT140Q96RY7 1462 aa40.62■■■■■ 4.09
SOX6-206ENST00000525835 POLA1P09884 1462 aaPredicted RBP40.47■■■■■ 4.07
SOX6-206ENST00000525835 CUX1P39880 1505 aa40.45■■■■■ 4.07
SOX6-206ENST00000525835 TARBP1Q13395 1621 aaKnown RBP40.42■■■■■ 4.06
SOX6-206ENST00000525835 ZNF608Q9ULD9 1512 aaPredicted RBP40.42■■■■■ 4.06
SOX6-206ENST00000525835 FGD5Q6ZNL6 1462 aa40.33■■■■■ 4.05
SOX6-206ENST00000525835 EIF4G3O43432 1585 aaKnown RBP40.28■■■■■ 4.04
SOX6-206ENST00000525835 SOGA1O94964 1423 aa40.28■■■■■ 4.04
SOX6-206ENST00000525835 RAD54L2Q9Y4B4 1467 aa40.26■■■■■ 4.03
SOX6-206ENST00000525835 AQRO60306 1485 aaKnown RBP eCLIP40.15■■■■■ 4.02
SOX6-206ENST00000525835 WDR97A6NE52 1622 aa40.15■■■■■ 4.02
SOX6-206ENST00000525835 WRNQ14191 1432 aaPredicted RBP eCLIP40.13■■■■■ 4.01
SOX6-206ENST00000525835 BIVM-ERCC5R4GMW8 1640 aa40.1■■■■■ 4.01
SOX6-206ENST00000525835 TOP2BQ02880 1626 aa40.09■■■■■ 4.01
SOX6-206ENST00000525835 TDRD9Q8NDG6 1382 aaKnown RBP40.05■■■■■ 4
SOX6-206ENST00000525835 SYNJ1O43426 1573 aa40.04■■■■■ 4
SOX6-206ENST00000525835 OSCARQ8IYS5 282 aa39.99■■■■□ 3.99
SOX6-206ENST00000525835 ABCA10Q8WWZ4 1543 aa39.96■■■■□ 3.99
SOX6-206ENST00000525835 GRIN2BQ13224 1484 aa39.86■■■■□ 3.97
SOX6-206ENST00000525835 ABCA5Q8WWZ7 1642 aa39.83■■■■□ 3.97
SOX6-206ENST00000525835 GAPVD1Q14C86 1478 aa39.82■■■■□ 3.97
SOX6-206ENST00000525835 SNAPC4Q5SXM2 1469 aa39.8■■■■□ 3.96
SOX6-206ENST00000525835 CHD1O14646 1710 aa39.79■■■■□ 3.96
SOX6-206ENST00000525835 MAGI1Q96QZ7 1491 aaPredicted RBP39.79■■■■□ 3.96
SOX6-206ENST00000525835 PBRM1Q86U86 1689 aa39.77■■■■□ 3.96
SOX6-206ENST00000525835 FBLN2P98095 1184 aa39.64■■■■□ 3.94
SOX6-206ENST00000525835 SYNJ2O15056 1496 aa39.62■■■■□ 3.93
SOX6-206ENST00000525835 CHMP7Q8WUX9 453 aaPredicted RBP39.56■■■■□ 3.92
SOX6-206ENST00000525835 ERICH3Q5RHP9 1530 aa39.5■■■■□ 3.91
SOX6-206ENST00000525835 ADAMTS12P58397 1594 aa39.45■■■■□ 3.91
SOX6-206ENST00000525835 RIMBP3CA6NJZ7 1639 aa39.4■■■■□ 3.9
SOX6-206ENST00000525835 RIMBP3BA6NNM3 1639 aa39.4■■■■□ 3.9
SOX6-206ENST00000525835 RIMBP3Q9UFD9 1639 aa39.4■■■■□ 3.9
SOX6-206ENST00000525835 CLASP1Q7Z460 1538 aa39.4■■■■□ 3.9
SOX6-206ENST00000525835 ARHGEF11O15085 1522 aa39.37■■■■□ 3.89
SOX6-206ENST00000525835 FHAD1B1AJZ9 1412 aa39.37■■■■□ 3.89
SOX6-206ENST00000525835 GRIN2AQ12879 1464 aa39.34■■■■□ 3.89
SOX6-206ENST00000525835 KIF27Q86VH2 1401 aa39.31■■■■□ 3.88
SOX6-206ENST00000525835 NUP160Q12769 1436 aa39.19■■■■□ 3.86
SOX6-206ENST00000525835 TRIM41Q8WV44 630 aa39.18■■■■□ 3.86
SOX6-206ENST00000525835 IGF1RP08069 1367 aa39.16■■■■□ 3.86
SOX6-206ENST00000525835 CEP170Q5SW79 1584 aa39.15■■■■□ 3.86
SOX6-206ENST00000525835 CUL7Q14999 1698 aa39.11■■■■□ 3.85
SOX6-206ENST00000525835 ARAP1Q96P48 1450 aa39.04■■■■□ 3.84
SOX6-206ENST00000525835 CYB5RLQ6IPT4 315 aa38.95■■■■□ 3.83
SOX6-206ENST00000525835 SHROOM2Q13796 1616 aa38.93■■■■□ 3.82
SOX6-206ENST00000525835 CARMIL1Q5VZK9 1371 aa38.91■■■■□ 3.82
SOX6-206ENST00000525835 RUSC2Q8N2Y8 1516 aa38.89■■■■□ 3.82
SOX6-206ENST00000525835 ERCC6L2Q5T890 1561 aa38.78■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms