RNA–Protein interactions for RNA: ENST00000525801.1

ROM1-202, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 3

Gene ROM1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-202ENST00000525801 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
ROM1-202ENST00000525801 ABCC9O60706 1549 aa32.96■■■□□ 2.87
ROM1-202ENST00000525801 CCDC180Q9P1Z9 1646 aa32.45■■■□□ 2.79
ROM1-202ENST00000525801 DCAF8L2P0C7V8 631 aa31.23■■■□□ 2.59
ROM1-202ENST00000525801 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
ROM1-202ENST00000525801 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
ROM1-202ENST00000525801 PABPN1Q86U42 306 aaKnown RBP eCLIP30.82■■■□□ 2.52
ROM1-202ENST00000525801 NACADO15069 1562 aa30.8■■■□□ 2.52
ROM1-202ENST00000525801 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
ROM1-202ENST00000525801 MYO15BQ96JP2 1530 aa30.19■■■□□ 2.42
ROM1-202ENST00000525801 BICRAQ9NZM4 1560 aa30.18■■■□□ 2.42
ROM1-202ENST00000525801 ZCCHC6Q5VYS8 1495 aaKnown RBP30.05■■■□□ 2.4
ROM1-202ENST00000525801 SCRIBQ14160 1630 aa29.88■■■□□ 2.37
ROM1-202ENST00000525801 DCAF1Q9Y4B6 1507 aa29.81■■■□□ 2.36
ROM1-202ENST00000525801 CECR2Q9BXF3 1484 aa29.61■■■□□ 2.33
ROM1-202ENST00000525801 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
ROM1-202ENST00000525801 SHROOM4Q9ULL8 1493 aa29.56■■■□□ 2.32
ROM1-202ENST00000525801 EIF4G1Q04637 1599 aaKnown RBP29.49■■■□□ 2.31
ROM1-202ENST00000525801 NCAPD3P42695 1498 aa28.48■■■□□ 2.15
ROM1-202ENST00000525801 DNAJC5Q9H3Z4 198 aa28.48■■■□□ 2.15
ROM1-202ENST00000525801 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
ROM1-202ENST00000525801 ATAD2BQ9ULI0 1458 aa28.45■■■□□ 2.14
ROM1-202ENST00000525801 SMARCA4P51532 1647 aa28.34■■■□□ 2.13
ROM1-202ENST00000525801 SMARCA2P51531 1590 aa28.29■■■□□ 2.12
ROM1-202ENST00000525801 NESP48681 1621 aa28.25■■■□□ 2.11
ROM1-202ENST00000525801 CUX2O14529 1486 aa28.21■■■□□ 2.11
ROM1-202ENST00000525801 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
ROM1-202ENST00000525801 HMGXB3Q12766 1538 aa28.18■■■□□ 2.1
ROM1-202ENST00000525801 BAZ1AQ9NRL2 1556 aaPredicted RBP28.18■■■□□ 2.1
ROM1-202ENST00000525801 MROH2BQ7Z745 1585 aa28.07■■■□□ 2.08
ROM1-202ENST00000525801 PEG3Q9GZU2 1588 aa27.92■■■□□ 2.06
ROM1-202ENST00000525801 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
ROM1-202ENST00000525801 PDS5BQ9NTI5 1447 aa27.79■■■□□ 2.04
ROM1-202ENST00000525801 THOC2Q8NI27 1593 aaKnown RBP27.77■■■□□ 2.04
ROM1-202ENST00000525801 KIF21AQ7Z4S6 1674 aa27.74■■■□□ 2.03
ROM1-202ENST00000525801 WIZO95785 1651 aa27.72■■■□□ 2.03
ROM1-202ENST00000525801 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
ROM1-202ENST00000525801 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
ROM1-202ENST00000525801 TRIM41Q8WV44 630 aa27.49■■□□□ 1.99
ROM1-202ENST00000525801 RSF1Q96T23 1441 aaPredicted RBP27.46■■□□□ 1.99
ROM1-202ENST00000525801 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
ROM1-202ENST00000525801 FANCD2Q9BXW9 1451 aa27.41■■□□□ 1.98
ROM1-202ENST00000525801 WDR62O43379 1518 aa27.38■■□□□ 1.97
ROM1-202ENST00000525801 CFTRP13569 1480 aa27.3■■□□□ 1.96
ROM1-202ENST00000525801 TOP2AP11388 1531 aaKnown RBP27.29■■□□□ 1.96
ROM1-202ENST00000525801 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
ROM1-202ENST00000525801 OSCARQ8IYS5 282 aa27.13■■□□□ 1.93
ROM1-202ENST00000525801 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
ROM1-202ENST00000525801 ZNF608Q9ULD9 1512 aaPredicted RBP26.92■■□□□ 1.9
ROM1-202ENST00000525801 IFT140Q96RY7 1462 aa26.86■■□□□ 1.89
ROM1-202ENST00000525801 TOPBP1Q92547 1522 aa26.85■■□□□ 1.89
ROM1-202ENST00000525801 PRDM2Q13029 1718 aa26.82■■□□□ 1.88
ROM1-202ENST00000525801 FBLN2P98095 1184 aa26.77■■□□□ 1.88
ROM1-202ENST00000525801 AQRO60306 1485 aaKnown RBP eCLIP26.72■■□□□ 1.87
ROM1-202ENST00000525801 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
ROM1-202ENST00000525801 DNMBPQ6XZF7 1577 aa26.68■■□□□ 1.86
ROM1-202ENST00000525801 RIMBP3CA6NJZ7 1639 aa26.65■■□□□ 1.86
ROM1-202ENST00000525801 RIMBP3BA6NNM3 1639 aa26.65■■□□□ 1.86
ROM1-202ENST00000525801 RIMBP3Q9UFD9 1639 aa26.65■■□□□ 1.86
ROM1-202ENST00000525801 EIF4G3O43432 1585 aaKnown RBP26.65■■□□□ 1.86
ROM1-202ENST00000525801 CYB5RLQ6IPT4 315 aa26.63■■□□□ 1.85
ROM1-202ENST00000525801 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
ROM1-202ENST00000525801 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.85
ROM1-202ENST00000525801 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
ROM1-202ENST00000525801 ARHGEF11O15085 1522 aa26.57■■□□□ 1.84
ROM1-202ENST00000525801 SOGA1O94964 1423 aa26.55■■□□□ 1.84
ROM1-202ENST00000525801 SUPT5HO00267 1087 aaKnown RBP26.54■■□□□ 1.84
ROM1-202ENST00000525801 TARBP1Q13395 1621 aaKnown RBP26.53■■□□□ 1.84
ROM1-202ENST00000525801 CHD1O14646 1710 aa26.46■■□□□ 1.83
ROM1-202ENST00000525801 TRHP20396 242 aaPredicted RBP26.45■■□□□ 1.82
ROM1-202ENST00000525801 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
ROM1-202ENST00000525801 CHMP7Q8WUX9 453 aaPredicted RBP26.43■■□□□ 1.82
ROM1-202ENST00000525801 SNAPC4Q5SXM2 1469 aa26.38■■□□□ 1.81
ROM1-202ENST00000525801 CUX1P39880 1505 aa26.36■■□□□ 1.81
ROM1-202ENST00000525801 ARAP1Q96P48 1450 aa26.32■■□□□ 1.8
ROM1-202ENST00000525801 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
ROM1-202ENST00000525801 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
ROM1-202ENST00000525801 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
ROM1-202ENST00000525801 SYNJ1O43426 1573 aa26.15■■□□□ 1.78
ROM1-202ENST00000525801 SYNJ2O15056 1496 aa26.14■■□□□ 1.78
ROM1-202ENST00000525801 CLASP1Q7Z460 1538 aa26.12■■□□□ 1.77
ROM1-202ENST00000525801 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
ROM1-202ENST00000525801 PBRM1Q86U86 1689 aa26.04■■□□□ 1.76
ROM1-202ENST00000525801 ABCA10Q8WWZ4 1543 aa26.03■■□□□ 1.76
ROM1-202ENST00000525801 WRNQ14191 1432 aaPredicted RBP eCLIP26■■□□□ 1.75
ROM1-202ENST00000525801 ABCA5Q8WWZ7 1642 aa25.95■■□□□ 1.74
ROM1-202ENST00000525801 GRIN2AQ12879 1464 aa25.89■■□□□ 1.73
ROM1-202ENST00000525801 ERCC6L2Q5T890 1561 aa25.86■■□□□ 1.73
ROM1-202ENST00000525801 TOP2BQ02880 1626 aa25.82■■□□□ 1.72
ROM1-202ENST00000525801 ADAMTS12P58397 1594 aa25.81■■□□□ 1.72
ROM1-202ENST00000525801 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
ROM1-202ENST00000525801 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
ROM1-202ENST00000525801 BIVM-ERCC5R4GMW8 1640 aa25.78■■□□□ 1.72
ROM1-202ENST00000525801 NUP160Q12769 1436 aa25.75■■□□□ 1.71
ROM1-202ENST00000525801 AEBP2Q6ZN18 517 aaPredicted RBP25.73■■□□□ 1.71
ROM1-202ENST00000525801 JPH4Q96JJ6 628 aa25.69■■□□□ 1.7
ROM1-202ENST00000525801 PRG4Q92954 1404 aaPredicted RBP25.67■■□□□ 1.7
ROM1-202ENST00000525801 ERICH3Q5RHP9 1530 aa25.67■■□□□ 1.7
ROM1-202ENST00000525801 TTBK1Q5TCY1 1321 aaPredicted RBP25.6■■□□□ 1.69
ROM1-202ENST00000525801 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms