RNA–Protein interactions for RNA: ENST00000525725.5

PACSIN3-203, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-203ENST00000525725 NISCHQ9Y2I1 1504 aa53.39■■■■■ 6.14
PACSIN3-203ENST00000525725 CCDC180Q9P1Z9 1646 aa48.03■■■■■ 5.28
PACSIN3-203ENST00000525725 ABCC9O60706 1549 aa47.45■■■■■ 5.19
PACSIN3-203ENST00000525725 RB1CC1Q8TDY2 1594 aa45.43■■■■■ 4.86
PACSIN3-203ENST00000525725 NACADO15069 1562 aa45.2■■■■■ 4.83
PACSIN3-203ENST00000525725 MYO15BQ96JP2 1530 aa44.77■■■■■ 4.76
PACSIN3-203ENST00000525725 UNC13AQ9UPW8 1703 aa44.61■■■■■ 4.73
PACSIN3-203ENST00000525725 ZCCHC6Q5VYS8 1495 aaKnown RBP44.4■■■■■ 4.7
PACSIN3-203ENST00000525725 DCAF8L2P0C7V8 631 aa44.38■■■■■ 4.7
PACSIN3-203ENST00000525725 DCAF1Q9Y4B6 1507 aa44.26■■■■■ 4.68
PACSIN3-203ENST00000525725 DNAJC5BQ9UF47 199 aa44.21■■■■■ 4.67
PACSIN3-203ENST00000525725 BICRAQ9NZM4 1560 aa44.19■■■■■ 4.66
PACSIN3-203ENST00000525725 PABPN1Q86U42 306 aaKnown RBP eCLIP44.01■■■■■ 4.64
PACSIN3-203ENST00000525725 SHROOM4Q9ULL8 1493 aa43.7■■■■■ 4.59
PACSIN3-203ENST00000525725 SCRIBQ14160 1630 aa43.57■■■■■ 4.57
PACSIN3-203ENST00000525725 CC2D2AQ9P2K1 1620 aa43.03■■■■■ 4.48
PACSIN3-203ENST00000525725 EIF4G1Q04637 1599 aaKnown RBP43.03■■■■■ 4.48
PACSIN3-203ENST00000525725 CECR2Q9BXF3 1484 aa42.76■■■■■ 4.44
PACSIN3-203ENST00000525725 SMARCA4P51532 1647 aa41.68■■■■■ 4.26
PACSIN3-203ENST00000525725 NCAPD3P42695 1498 aa41.66■■■■■ 4.26
PACSIN3-203ENST00000525725 ATAD2BQ9ULI0 1458 aa41.55■■■■■ 4.24
PACSIN3-203ENST00000525725 HMGXB3Q12766 1538 aa41.52■■■■■ 4.24
PACSIN3-203ENST00000525725 SMARCA2P51531 1590 aa41.5■■■■■ 4.23
PACSIN3-203ENST00000525725 BAZ1AQ9NRL2 1556 aaPredicted RBP41.46■■■■■ 4.23
PACSIN3-203ENST00000525725 PEG3Q9GZU2 1588 aa41.37■■■■■ 4.21
PACSIN3-203ENST00000525725 BAZ1BQ9UIG0 1483 aaKnown RBP41.14■■■■■ 4.18
PACSIN3-203ENST00000525725 MROH2BQ7Z745 1585 aa41.12■■■■■ 4.17
PACSIN3-203ENST00000525725 CUX2O14529 1486 aa40.95■■■■■ 4.15
PACSIN3-203ENST00000525725 ERCC6Q03468 1493 aa40.93■■■■■ 4.14
PACSIN3-203ENST00000525725 NESP48681 1621 aa40.88■■■■■ 4.13
PACSIN3-203ENST00000525725 LAMC3Q9Y6N6 1575 aa40.77■■■■■ 4.12
PACSIN3-203ENST00000525725 WIZO95785 1651 aa40.66■■■■■ 4.1
PACSIN3-203ENST00000525725 THOC2Q8NI27 1593 aaKnown RBP40.65■■■■■ 4.1
PACSIN3-203ENST00000525725 KIF21AQ7Z4S6 1674 aa40.53■■■■■ 4.08
PACSIN3-203ENST00000525725 DNAJC5Q9H3Z4 198 aa40.44■■■■■ 4.06
PACSIN3-203ENST00000525725 PDS5BQ9NTI5 1447 aa40.34■■■■■ 4.05
PACSIN3-203ENST00000525725 CADPSQ9ULU8 1353 aa40.31■■■■■ 4.04
PACSIN3-203ENST00000525725 RSF1Q96T23 1441 aaPredicted RBP40.3■■■■■ 4.04
PACSIN3-203ENST00000525725 TOP2AP11388 1531 aaKnown RBP40.22■■■■■ 4.03
PACSIN3-203ENST00000525725 WDR62O43379 1518 aa40.09■■■■■ 4.01
PACSIN3-203ENST00000525725 MRC2Q9UBG0 1479 aa40.08■■■■■ 4.01
PACSIN3-203ENST00000525725 CFTRP13569 1480 aa40■■■■□ 3.99
PACSIN3-203ENST00000525725 CEP164Q9UPV0 1460 aa39.94■■■■□ 3.98
PACSIN3-203ENST00000525725 PRDM2Q13029 1718 aa39.91■■■■□ 3.98
PACSIN3-203ENST00000525725 FANCD2Q9BXW9 1451 aa39.9■■■■□ 3.98
PACSIN3-203ENST00000525725 URB2Q14146 1524 aaKnown RBP39.62■■■■□ 3.93
PACSIN3-203ENST00000525725 CCDC88BA6NC98 1476 aa39.62■■■■□ 3.93
PACSIN3-203ENST00000525725 TOPBP1Q92547 1522 aa39.22■■■■□ 3.87
PACSIN3-203ENST00000525725 DNMBPQ6XZF7 1577 aa39.16■■■■□ 3.86
PACSIN3-203ENST00000525725 IFT140Q96RY7 1462 aa39.13■■■■□ 3.85
PACSIN3-203ENST00000525725 ABCC8Q09428 1581 aa39.12■■■■□ 3.85
PACSIN3-203ENST00000525725 ZNF608Q9ULD9 1512 aaPredicted RBP39.04■■■■□ 3.84
PACSIN3-203ENST00000525725 EIF4G3O43432 1585 aaKnown RBP38.99■■■■□ 3.83
PACSIN3-203ENST00000525725 TARBP1Q13395 1621 aaKnown RBP38.96■■■■□ 3.83
PACSIN3-203ENST00000525725 POLA1P09884 1462 aaPredicted RBP38.84■■■■□ 3.81
PACSIN3-203ENST00000525725 OSCARQ8IYS5 282 aa38.8■■■■□ 3.8
PACSIN3-203ENST00000525725 CHD1O14646 1710 aa38.66■■■■□ 3.78
PACSIN3-203ENST00000525725 WDR97A6NE52 1622 aa38.66■■■■□ 3.78
PACSIN3-203ENST00000525725 CUX1P39880 1505 aa38.65■■■■□ 3.78
PACSIN3-203ENST00000525725 AQRO60306 1485 aaKnown RBP eCLIP38.61■■■■□ 3.774e-10■■■■□ 21.8
PACSIN3-203ENST00000525725 FGD5Q6ZNL6 1462 aa38.6■■■■□ 3.77
PACSIN3-203ENST00000525725 RIMBP3CA6NJZ7 1639 aa38.6■■■■□ 3.77
PACSIN3-203ENST00000525725 RIMBP3BA6NNM3 1639 aa38.6■■■■□ 3.77
PACSIN3-203ENST00000525725 RIMBP3Q9UFD9 1639 aa38.6■■■■□ 3.77
PACSIN3-203ENST00000525725 RAD54L2Q9Y4B4 1467 aa38.58■■■■□ 3.77
PACSIN3-203ENST00000525725 TRIM41Q8WV44 630 aa38.56■■■■□ 3.76
PACSIN3-203ENST00000525725 SOGA1O94964 1423 aa38.49■■■■□ 3.75
PACSIN3-203ENST00000525725 ARHGEF11O15085 1522 aa38.47■■■■□ 3.75
PACSIN3-203ENST00000525725 TDRD9Q8NDG6 1382 aaKnown RBP38.36■■■■□ 3.73
PACSIN3-203ENST00000525725 SNAPC4Q5SXM2 1469 aa38.34■■■■□ 3.73
PACSIN3-203ENST00000525725 PBRM1Q86U86 1689 aa38.31■■■■□ 3.72
PACSIN3-203ENST00000525725 MAGI1Q96QZ7 1491 aaPredicted RBP38.3■■■■□ 3.72
PACSIN3-203ENST00000525725 SUPT5HO00267 1087 aaKnown RBP38.3■■■■□ 3.72
PACSIN3-203ENST00000525725 ABCA5Q8WWZ7 1642 aa38.27■■■■□ 3.72
PACSIN3-203ENST00000525725 GRIN2BQ13224 1484 aa38.25■■■■□ 3.71
PACSIN3-203ENST00000525725 CLASP1Q7Z460 1538 aa38.23■■■■□ 3.71
PACSIN3-203ENST00000525725 ABCA10Q8WWZ4 1543 aa38.22■■■■□ 3.71
PACSIN3-203ENST00000525725 BIVM-ERCC5R4GMW8 1640 aa38.21■■■■□ 3.71
PACSIN3-203ENST00000525725 TOP2BQ02880 1626 aa38.15■■■■□ 3.7
PACSIN3-203ENST00000525725 SYNJ2O15056 1496 aa38.14■■■■□ 3.7
PACSIN3-203ENST00000525725 SYNJ1O43426 1573 aa38.13■■■■□ 3.69
PACSIN3-203ENST00000525725 GAPVD1Q14C86 1478 aa38.12■■■■□ 3.69
PACSIN3-203ENST00000525725 ARAP1Q96P48 1450 aa38.11■■■■□ 3.69
PACSIN3-203ENST00000525725 FBLN2P98095 1184 aa38.05■■■■□ 3.68
PACSIN3-203ENST00000525725 WRNQ14191 1432 aaPredicted RBP eCLIP37.99■■■■□ 3.67
PACSIN3-203ENST00000525725 ADAMTS12P58397 1594 aa37.94■■■■□ 3.66
PACSIN3-203ENST00000525725 CHMP7Q8WUX9 453 aaPredicted RBP37.9■■■■□ 3.66
PACSIN3-203ENST00000525725 CYB5RLQ6IPT4 315 aa37.82■■■■□ 3.64
PACSIN3-203ENST00000525725 GRIN2AQ12879 1464 aa37.81■■■■□ 3.64
PACSIN3-203ENST00000525725 ERICH3Q5RHP9 1530 aa37.77■■■■□ 3.64
PACSIN3-203ENST00000525725 CEP170Q5SW79 1584 aa37.72■■■■□ 3.63
PACSIN3-203ENST00000525725 NUP160Q12769 1436 aa37.7■■■■□ 3.63
PACSIN3-203ENST00000525725 FHAD1B1AJZ9 1412 aa37.66■■■■□ 3.62
PACSIN3-203ENST00000525725 SHROOM2Q13796 1616 aa37.65■■■■□ 3.62
PACSIN3-203ENST00000525725 ERCC6L2Q5T890 1561 aa37.55■■■■□ 3.6
PACSIN3-203ENST00000525725 RUSC2Q8N2Y8 1516 aa37.42■■■■□ 3.58
PACSIN3-203ENST00000525725 CUL7Q14999 1698 aa37.33■■■■□ 3.57
PACSIN3-203ENST00000525725 TRHP20396 242 aaPredicted RBP37.24■■■■□ 3.55
PACSIN3-203ENST00000525725 KIF27Q86VH2 1401 aa37.21■■■■□ 3.55
PACSIN3-203ENST00000525725 PRG4Q92954 1404 aaPredicted RBP37.16■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms