RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
CLP1-202ENST00000525602 ABCC9O60706 1549 aa28.3■■■□□ 2.12
CLP1-202ENST00000525602 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
CLP1-202ENST00000525602 RB1CC1Q8TDY2 1594 aa26.78■■□□□ 1.88
CLP1-202ENST00000525602 DNAJC5BQ9UF47 199 aa26.7■■□□□ 1.86
CLP1-202ENST00000525602 NACADO15069 1562 aa26.52■■□□□ 1.84
CLP1-202ENST00000525602 DCAF8L2P0C7V8 631 aa26.35■■□□□ 1.81
CLP1-202ENST00000525602 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
CLP1-202ENST00000525602 PABPN1Q86U42 306 aaKnown RBP eCLIP26.3■■□□□ 1.8
CLP1-202ENST00000525602 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
CLP1-202ENST00000525602 ZCCHC6Q5VYS8 1495 aaKnown RBP26.03■■□□□ 1.76
CLP1-202ENST00000525602 MYO15BQ96JP2 1530 aa26.03■■□□□ 1.76
CLP1-202ENST00000525602 DCAF1Q9Y4B6 1507 aa25.86■■□□□ 1.73
CLP1-202ENST00000525602 SCRIBQ14160 1630 aa25.67■■□□□ 1.7
CLP1-202ENST00000525602 SHROOM4Q9ULL8 1493 aa25.55■■□□□ 1.68
CLP1-202ENST00000525602 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
CLP1-202ENST00000525602 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
CLP1-202ENST00000525602 EIF4G1Q04637 1599 aaKnown RBP25.43■■□□□ 1.66
CLP1-202ENST00000525602 DNAJC5Q9H3Z4 198 aa24.53■■□□□ 1.52
CLP1-202ENST00000525602 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
CLP1-202ENST00000525602 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
CLP1-202ENST00000525602 SMARCA4P51532 1647 aa24.41■■□□□ 1.5
CLP1-202ENST00000525602 ERCC6Q03468 1493 aa24.39■■□□□ 1.5
CLP1-202ENST00000525602 CUX2O14529 1486 aa24.36■■□□□ 1.49
CLP1-202ENST00000525602 HMGXB3Q12766 1538 aa24.32■■□□□ 1.48
CLP1-202ENST00000525602 SMARCA2P51531 1590 aa24.31■■□□□ 1.48
CLP1-202ENST00000525602 NESP48681 1621 aa24.29■■□□□ 1.48
CLP1-202ENST00000525602 BAZ1AQ9NRL2 1556 aaPredicted RBP24.23■■□□□ 1.47
CLP1-202ENST00000525602 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
CLP1-202ENST00000525602 PEG3Q9GZU2 1588 aa24.11■■□□□ 1.45
CLP1-202ENST00000525602 MROH2BQ7Z745 1585 aa24.09■■□□□ 1.45
CLP1-202ENST00000525602 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.45
CLP1-202ENST00000525602 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
CLP1-202ENST00000525602 LAMC3Q9Y6N6 1575 aa23.98■■□□□ 1.43
CLP1-202ENST00000525602 WIZO95785 1651 aa23.83■■□□□ 1.41
CLP1-202ENST00000525602 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
CLP1-202ENST00000525602 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
CLP1-202ENST00000525602 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
CLP1-202ENST00000525602 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
CLP1-202ENST00000525602 WDR62O43379 1518 aa23.65■■□□□ 1.38
CLP1-202ENST00000525602 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.37
CLP1-202ENST00000525602 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
CLP1-202ENST00000525602 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
CLP1-202ENST00000525602 TRIM41Q8WV44 630 aa23.48■■□□□ 1.35
CLP1-202ENST00000525602 CFTRP13569 1480 aa23.44■■□□□ 1.34
CLP1-202ENST00000525602 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
CLP1-202ENST00000525602 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
CLP1-202ENST00000525602 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
CLP1-202ENST00000525602 OSCARQ8IYS5 282 aa23.14■■□□□ 1.3
CLP1-202ENST00000525602 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
CLP1-202ENST00000525602 TOPBP1Q92547 1522 aa23.06■■□□□ 1.28
CLP1-202ENST00000525602 RIMBP3CA6NJZ7 1639 aa23.05■■□□□ 1.28
CLP1-202ENST00000525602 RIMBP3BA6NNM3 1639 aa23.05■■□□□ 1.28
CLP1-202ENST00000525602 RIMBP3Q9UFD9 1639 aa23.05■■□□□ 1.28
CLP1-202ENST00000525602 IFT140Q96RY7 1462 aa23.04■■□□□ 1.28
CLP1-202ENST00000525602 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
CLP1-202ENST00000525602 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
CLP1-202ENST00000525602 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
CLP1-202ENST00000525602 ARHGEF11O15085 1522 aa22.93■■□□□ 1.26
CLP1-202ENST00000525602 CHD1O14646 1710 aa22.91■■□□□ 1.26
CLP1-202ENST00000525602 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
CLP1-202ENST00000525602 AQRO60306 1485 aaKnown RBP eCLIP22.87■■□□□ 1.25
CLP1-202ENST00000525602 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
CLP1-202ENST00000525602 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
CLP1-202ENST00000525602 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
CLP1-202ENST00000525602 ARAP1Q96P48 1450 aa22.72■■□□□ 1.23
CLP1-202ENST00000525602 FBLN2P98095 1184 aa22.7■■□□□ 1.22
CLP1-202ENST00000525602 CYB5RLQ6IPT4 315 aa22.7■■□□□ 1.22
CLP1-202ENST00000525602 TDRD9Q8NDG6 1382 aaKnown RBP22.67■■□□□ 1.22
CLP1-202ENST00000525602 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
CLP1-202ENST00000525602 SOGA1O94964 1423 aa22.65■■□□□ 1.22
CLP1-202ENST00000525602 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.22
CLP1-202ENST00000525602 CUX1P39880 1505 aa22.64■■□□□ 1.21
CLP1-202ENST00000525602 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.2
CLP1-202ENST00000525602 WDR97A6NE52 1622 aa22.56■■□□□ 1.2
CLP1-202ENST00000525602 PBRM1Q86U86 1689 aa22.51■■□□□ 1.19
CLP1-202ENST00000525602 MAGI1Q96QZ7 1491 aaPredicted RBP22.5■■□□□ 1.19
CLP1-202ENST00000525602 TRHP20396 242 aaPredicted RBP22.5■■□□□ 1.19
CLP1-202ENST00000525602 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
CLP1-202ENST00000525602 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
CLP1-202ENST00000525602 SYNJ2O15056 1496 aa22.44■■□□□ 1.18
CLP1-202ENST00000525602 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
CLP1-202ENST00000525602 WRNQ14191 1432 aaPredicted RBP eCLIP22.41■■□□□ 1.18
CLP1-202ENST00000525602 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
CLP1-202ENST00000525602 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
CLP1-202ENST00000525602 TOP2BQ02880 1626 aa22.39■■□□□ 1.18
CLP1-202ENST00000525602 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
CLP1-202ENST00000525602 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
CLP1-202ENST00000525602 ERCC6L2Q5T890 1561 aa22.29■■□□□ 1.16
CLP1-202ENST00000525602 ADAMTS12P58397 1594 aa22.26■■□□□ 1.15
CLP1-202ENST00000525602 GRIN2AQ12879 1464 aa22.23■■□□□ 1.15
CLP1-202ENST00000525602 CEP170Q5SW79 1584 aa22.23■■□□□ 1.15
CLP1-202ENST00000525602 NUP160Q12769 1436 aa22.14■■□□□ 1.14
CLP1-202ENST00000525602 SHROOM2Q13796 1616 aa22.12■■□□□ 1.13
CLP1-202ENST00000525602 FHAD1B1AJZ9 1412 aa22.07■■□□□ 1.12
CLP1-202ENST00000525602 ERICH3Q5RHP9 1530 aa22.05■■□□□ 1.12
CLP1-202ENST00000525602 KIF13AQ9H1H9 1805 aa21.97■■□□□ 1.11
CLP1-202ENST00000525602 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
CLP1-202ENST00000525602 PRG4Q92954 1404 aaPredicted RBP21.94■■□□□ 1.1
CLP1-202ENST00000525602 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms