RNA–Protein interactions for RNA: ENST00000525568.1

PITPNM1-205, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 3

Gene PITPNM1, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-205ENST00000525568 NISCHQ9Y2I1 1504 aa46.67■■■■■ 5.06
PITPNM1-205ENST00000525568 CCDC180Q9P1Z9 1646 aa41.96■■■■■ 4.31
PITPNM1-205ENST00000525568 ABCC9O60706 1549 aa41.94■■■■■ 4.3
PITPNM1-205ENST00000525568 RB1CC1Q8TDY2 1594 aa39.96■■■■□ 3.99
PITPNM1-205ENST00000525568 NACADO15069 1562 aa39.64■■■■□ 3.94
PITPNM1-205ENST00000525568 DCAF8L2P0C7V8 631 aa39.55■■■■□ 3.92
PITPNM1-205ENST00000525568 DNAJC5BQ9UF47 199 aa39.2■■■■□ 3.87
PITPNM1-205ENST00000525568 UNC13AQ9UPW8 1703 aa39.06■■■■□ 3.84
PITPNM1-205ENST00000525568 PABPN1Q86U42 306 aaKnown RBP eCLIP39.02■■■■□ 3.84
PITPNM1-205ENST00000525568 MYO15BQ96JP2 1530 aa39.02■■■■□ 3.84
PITPNM1-205ENST00000525568 BICRAQ9NZM4 1560 aa38.67■■■■□ 3.78
PITPNM1-205ENST00000525568 ZCCHC6Q5VYS8 1495 aaKnown RBP38.66■■■■□ 3.78
PITPNM1-205ENST00000525568 DCAF1Q9Y4B6 1507 aa38.53■■■■□ 3.76
PITPNM1-205ENST00000525568 SCRIBQ14160 1630 aa38.25■■■■□ 3.71
PITPNM1-205ENST00000525568 SHROOM4Q9ULL8 1493 aa38.22■■■■□ 3.71
PITPNM1-205ENST00000525568 CC2D2AQ9P2K1 1620 aa37.89■■■■□ 3.66
PITPNM1-205ENST00000525568 EIF4G1Q04637 1599 aaKnown RBP37.79■■■■□ 3.64
PITPNM1-205ENST00000525568 CECR2Q9BXF3 1484 aa37.77■■■■□ 3.64
PITPNM1-205ENST00000525568 NCAPD3P42695 1498 aa36.53■■■■□ 3.44
PITPNM1-205ENST00000525568 SMARCA4P51532 1647 aa36.45■■■■□ 3.43
PITPNM1-205ENST00000525568 ATAD2BQ9ULI0 1458 aa36.43■■■■□ 3.42
PITPNM1-205ENST00000525568 SMARCA2P51531 1590 aa36.4■■■■□ 3.42
PITPNM1-205ENST00000525568 HMGXB3Q12766 1538 aa36.31■■■■□ 3.4
PITPNM1-205ENST00000525568 BAZ1AQ9NRL2 1556 aaPredicted RBP36.29■■■■□ 3.4
PITPNM1-205ENST00000525568 ERCC6Q03468 1493 aa36.29■■■■□ 3.4
PITPNM1-205ENST00000525568 BAZ1BQ9UIG0 1483 aaKnown RBP36.16■■■■□ 3.38
PITPNM1-205ENST00000525568 CUX2O14529 1486 aa36.15■■■■□ 3.38
PITPNM1-205ENST00000525568 DNAJC5Q9H3Z4 198 aa36.07■■■■□ 3.36
PITPNM1-205ENST00000525568 PEG3Q9GZU2 1588 aa36.03■■■■□ 3.36
PITPNM1-205ENST00000525568 NESP48681 1621 aa35.98■■■■□ 3.35
PITPNM1-205ENST00000525568 MROH2BQ7Z745 1585 aa35.95■■■■□ 3.35
PITPNM1-205ENST00000525568 LAMC3Q9Y6N6 1575 aa35.8■■■■□ 3.32
PITPNM1-205ENST00000525568 THOC2Q8NI27 1593 aaKnown RBP35.64■■■■□ 3.3
PITPNM1-205ENST00000525568 KIF21AQ7Z4S6 1674 aa35.61■■■■□ 3.29
PITPNM1-205ENST00000525568 PDS5BQ9NTI5 1447 aa35.59■■■■□ 3.29
PITPNM1-205ENST00000525568 WIZO95785 1651 aa35.58■■■■□ 3.29
PITPNM1-205ENST00000525568 CADPSQ9ULU8 1353 aa35.45■■■■□ 3.27
PITPNM1-205ENST00000525568 MRC2Q9UBG0 1479 aa35.27■■■■□ 3.24
PITPNM1-205ENST00000525568 RSF1Q96T23 1441 aaPredicted RBP35.19■■■■□ 3.22
PITPNM1-205ENST00000525568 WDR62O43379 1518 aa35.16■■■■□ 3.22
PITPNM1-205ENST00000525568 CEP164Q9UPV0 1460 aa35.16■■■■□ 3.22
PITPNM1-205ENST00000525568 TOP2AP11388 1531 aaKnown RBP35.11■■■■□ 3.21
PITPNM1-205ENST00000525568 FANCD2Q9BXW9 1451 aa35.08■■■■□ 3.21
PITPNM1-205ENST00000525568 CFTRP13569 1480 aa35.03■■■■□ 3.2
PITPNM1-205ENST00000525568 PRDM2Q13029 1718 aa34.84■■■■□ 3.17
PITPNM1-205ENST00000525568 URB2Q14146 1524 aaKnown RBP34.75■■■■□ 3.15
PITPNM1-205ENST00000525568 CCDC88BA6NC98 1476 aa34.68■■■■□ 3.14
PITPNM1-205ENST00000525568 TRIM41Q8WV44 630 aa34.62■■■■□ 3.13
PITPNM1-205ENST00000525568 OSCARQ8IYS5 282 aa34.52■■■■□ 3.12
PITPNM1-205ENST00000525568 IFT140Q96RY7 1462 aa34.43■■■■□ 3.1
PITPNM1-205ENST00000525568 TOPBP1Q92547 1522 aa34.4■■■■□ 3.1
PITPNM1-205ENST00000525568 ABCC8Q09428 1581 aa34.38■■■■□ 3.09
PITPNM1-205ENST00000525568 ZNF608Q9ULD9 1512 aaPredicted RBP34.32■■■■□ 3.08
PITPNM1-205ENST00000525568 DNMBPQ6XZF7 1577 aa34.31■■■■□ 3.08
PITPNM1-205ENST00000525568 EIF4G3O43432 1585 aaKnown RBP34.2■■■■□ 3.07
PITPNM1-205ENST00000525568 TARBP1Q13395 1621 aaKnown RBP34.08■■■■□ 3.05
PITPNM1-205ENST00000525568 RIMBP3CA6NJZ7 1639 aa34.07■■■■□ 3.04
PITPNM1-205ENST00000525568 RIMBP3BA6NNM3 1639 aa34.07■■■■□ 3.04
PITPNM1-205ENST00000525568 RIMBP3Q9UFD9 1639 aa34.07■■■■□ 3.04
PITPNM1-205ENST00000525568 POLA1P09884 1462 aaPredicted RBP34.04■■■■□ 3.04
PITPNM1-205ENST00000525568 AQRO60306 1485 aaKnown RBP eCLIP34.03■■■■□ 3.04
PITPNM1-205ENST00000525568 CHD1O14646 1710 aa34■■■■□ 3.03
PITPNM1-205ENST00000525568 ARHGEF11O15085 1522 aa33.94■■■■□ 3.02
PITPNM1-205ENST00000525568 FBLN2P98095 1184 aa33.93■■■■□ 3.02
PITPNM1-205ENST00000525568 RAD54L2Q9Y4B4 1467 aa33.92■■■■□ 3.02
PITPNM1-205ENST00000525568 SOGA1O94964 1423 aa33.91■■■■□ 3.02
PITPNM1-205ENST00000525568 FGD5Q6ZNL6 1462 aa33.86■■■■□ 3.01
PITPNM1-205ENST00000525568 TDRD9Q8NDG6 1382 aaKnown RBP33.83■■■■□ 3.01
PITPNM1-205ENST00000525568 WDR97A6NE52 1622 aa33.79■■■■□ 3
PITPNM1-205ENST00000525568 CUX1P39880 1505 aa33.79■■■■□ 3
PITPNM1-205ENST00000525568 SUPT5HO00267 1087 aaKnown RBP33.76■■■□□ 2.99
PITPNM1-205ENST00000525568 SNAPC4Q5SXM2 1469 aa33.72■■■□□ 2.99
PITPNM1-205ENST00000525568 CYB5RLQ6IPT4 315 aa33.72■■■□□ 2.99
PITPNM1-205ENST00000525568 CHMP7Q8WUX9 453 aaPredicted RBP33.65■■■□□ 2.98
PITPNM1-205ENST00000525568 MAGI1Q96QZ7 1491 aaPredicted RBP33.63■■■□□ 2.97
PITPNM1-205ENST00000525568 GRIN2BQ13224 1484 aa33.63■■■□□ 2.97
PITPNM1-205ENST00000525568 SYNJ1O43426 1573 aa33.58■■■□□ 2.97
PITPNM1-205ENST00000525568 ARAP1Q96P48 1450 aa33.57■■■□□ 2.97
PITPNM1-205ENST00000525568 PBRM1Q86U86 1689 aa33.57■■■□□ 2.96
PITPNM1-205ENST00000525568 SYNJ2O15056 1496 aa33.51■■■□□ 2.96
PITPNM1-205ENST00000525568 GAPVD1Q14C86 1478 aa33.51■■■□□ 2.96
PITPNM1-205ENST00000525568 CLASP1Q7Z460 1538 aa33.5■■■□□ 2.95
PITPNM1-205ENST00000525568 ABCA10Q8WWZ4 1543 aa33.44■■■□□ 2.94
PITPNM1-205ENST00000525568 TRHP20396 242 aaPredicted RBP33.43■■■□□ 2.94
PITPNM1-205ENST00000525568 ABCA5Q8WWZ7 1642 aa33.41■■■□□ 2.94
PITPNM1-205ENST00000525568 WRNQ14191 1432 aaPredicted RBP eCLIP33.35■■■□□ 2.93
PITPNM1-205ENST00000525568 BIVM-ERCC5R4GMW8 1640 aa33.3■■■□□ 2.92
PITPNM1-205ENST00000525568 TOP2BQ02880 1626 aa33.28■■■□□ 2.92
PITPNM1-205ENST00000525568 GRIN2AQ12879 1464 aa33.18■■■□□ 2.9
PITPNM1-205ENST00000525568 ADAMTS12P58397 1594 aa33.18■■■□□ 2.9
PITPNM1-205ENST00000525568 FHAD1B1AJZ9 1412 aa33.08■■■□□ 2.89
PITPNM1-205ENST00000525568 ERICH3Q5RHP9 1530 aa33.06■■■□□ 2.88
PITPNM1-205ENST00000525568 CEP170Q5SW79 1584 aa33.05■■■□□ 2.88
PITPNM1-205ENST00000525568 NUP160Q12769 1436 aa33.02■■■□□ 2.88
PITPNM1-205ENST00000525568 ERCC6L2Q5T890 1561 aa32.96■■■□□ 2.87
PITPNM1-205ENST00000525568 SHROOM2Q13796 1616 aa32.91■■■□□ 2.86
PITPNM1-205ENST00000525568 PRG4Q92954 1404 aaPredicted RBP32.77■■■□□ 2.84
PITPNM1-205ENST00000525568 JPH4Q96JJ6 628 aa32.74■■■□□ 2.83
PITPNM1-205ENST00000525568 RUSC2Q8N2Y8 1516 aa32.71■■■□□ 2.83
PITPNM1-205ENST00000525568 KIF27Q86VH2 1401 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms