RNA–Protein interactions for RNA: ENST00000525355.5

NCAM1-204, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 4

Gene NCAM1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-204ENST00000525355 NISCHQ9Y2I1 1504 aa20.81■□□□□ 0.92
NCAM1-204ENST00000525355 ABCC9O60706 1549 aa18.69■□□□□ 0.58
NCAM1-204ENST00000525355 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
NCAM1-204ENST00000525355 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
NCAM1-204ENST00000525355 NACADO15069 1562 aa17.67■□□□□ 0.42
NCAM1-204ENST00000525355 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
NCAM1-204ENST00000525355 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
NCAM1-204ENST00000525355 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
NCAM1-204ENST00000525355 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
NCAM1-204ENST00000525355 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
NCAM1-204ENST00000525355 BICRAQ9NZM4 1560 aa17.24■□□□□ 0.35
NCAM1-204ENST00000525355 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
NCAM1-204ENST00000525355 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
NCAM1-204ENST00000525355 SHROOM4Q9ULL8 1493 aa17.03■□□□□ 0.32
NCAM1-204ENST00000525355 SCRIBQ14160 1630 aa17.02■□□□□ 0.31
NCAM1-204ENST00000525355 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
NCAM1-204ENST00000525355 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
NCAM1-204ENST00000525355 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
NCAM1-204ENST00000525355 NCAPD3P42695 1498 aa16.3■□□□□ 0.2
NCAM1-204ENST00000525355 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
NCAM1-204ENST00000525355 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
NCAM1-204ENST00000525355 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
NCAM1-204ENST00000525355 HMGXB3Q12766 1538 aa16.18■□□□□ 0.18
NCAM1-204ENST00000525355 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
NCAM1-204ENST00000525355 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
NCAM1-204ENST00000525355 DNAJC5Q9H3Z4 198 aa16.13■□□□□ 0.17
NCAM1-204ENST00000525355 CUX2O14529 1486 aa16.11■□□□□ 0.17
NCAM1-204ENST00000525355 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
NCAM1-204ENST00000525355 PEG3Q9GZU2 1588 aa16.06■□□□□ 0.16
NCAM1-204ENST00000525355 NESP48681 1621 aa16.05■□□□□ 0.16
NCAM1-204ENST00000525355 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
NCAM1-204ENST00000525355 LAMC3Q9Y6N6 1575 aa15.94■□□□□ 0.14
NCAM1-204ENST00000525355 PDS5BQ9NTI5 1447 aa15.87■□□□□ 0.13
NCAM1-204ENST00000525355 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
NCAM1-204ENST00000525355 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
NCAM1-204ENST00000525355 WIZO95785 1651 aa15.84■□□□□ 0.13
NCAM1-204ENST00000525355 CADPSQ9ULU8 1353 aa15.83■□□□□ 0.12
NCAM1-204ENST00000525355 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
NCAM1-204ENST00000525355 RSF1Q96T23 1441 aaPredicted RBP15.7■□□□□ 0.1
NCAM1-204ENST00000525355 WDR62O43379 1518 aa15.67■□□□□ 0.1
NCAM1-204ENST00000525355 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
NCAM1-204ENST00000525355 TOP2AP11388 1531 aaKnown RBP15.64■□□□□ 0.09
NCAM1-204ENST00000525355 FANCD2Q9BXW9 1451 aa15.64■□□□□ 0.09
NCAM1-204ENST00000525355 CFTRP13569 1480 aa15.63■□□□□ 0.09
NCAM1-204ENST00000525355 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
NCAM1-204ENST00000525355 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
NCAM1-204ENST00000525355 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
NCAM1-204ENST00000525355 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
NCAM1-204ENST00000525355 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
NCAM1-204ENST00000525355 IFT140Q96RY7 1462 aa15.35■□□□□ 0.05
NCAM1-204ENST00000525355 TOPBP1Q92547 1522 aa15.34■□□□□ 0.05
NCAM1-204ENST00000525355 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
NCAM1-204ENST00000525355 ZNF608Q9ULD9 1512 aaPredicted RBP15.31■□□□□ 0.04
NCAM1-204ENST00000525355 DNMBPQ6XZF7 1577 aa15.28■□□□□ 0.04
NCAM1-204ENST00000525355 EIF4G3O43432 1585 aaKnown RBP15.22■□□□□ 0.03
NCAM1-204ENST00000525355 AQRO60306 1485 aaKnown RBP eCLIP15.19■□□□□ 0.02
NCAM1-204ENST00000525355 TARBP1Q13395 1621 aaKnown RBP15.18■□□□□ 0.02
NCAM1-204ENST00000525355 POLA1P09884 1462 aaPredicted RBP15.18■□□□□ 0.02
NCAM1-204ENST00000525355 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
NCAM1-204ENST00000525355 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
NCAM1-204ENST00000525355 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
NCAM1-204ENST00000525355 FBLN2P98095 1184 aa15.14■□□□□ 0.01
NCAM1-204ENST00000525355 ARHGEF11O15085 1522 aa15.13■□□□□ 0.01
NCAM1-204ENST00000525355 SOGA1O94964 1423 aa15.13■□□□□ 0.01
NCAM1-204ENST00000525355 RAD54L2Q9Y4B4 1467 aa15.13■□□□□ 0.01
NCAM1-204ENST00000525355 CHD1O14646 1710 aa15.12■□□□□ 0.01
NCAM1-204ENST00000525355 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
NCAM1-204ENST00000525355 FGD5Q6ZNL6 1462 aa15.09■□□□□ 0.01
NCAM1-204ENST00000525355 CUX1P39880 1505 aa15.07■□□□□ 0
NCAM1-204ENST00000525355 SUPT5HO00267 1087 aaKnown RBP15.06■□□□□ 0
NCAM1-204ENST00000525355 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
NCAM1-204ENST00000525355 WDR97A6NE52 1622 aa15.04■□□□□ -0
NCAM1-204ENST00000525355 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
NCAM1-204ENST00000525355 CHMP7Q8WUX9 453 aaPredicted RBP15.02■□□□□ -0
NCAM1-204ENST00000525355 GRIN2BQ13224 1484 aa14.99□□□□□ -0.01
NCAM1-204ENST00000525355 MAGI1Q96QZ7 1491 aaPredicted RBP14.99□□□□□ -0.01
NCAM1-204ENST00000525355 ARAP1Q96P48 1450 aa14.96□□□□□ -0.01
NCAM1-204ENST00000525355 SYNJ1O43426 1573 aa14.95□□□□□ -0.02
NCAM1-204ENST00000525355 SYNJ2O15056 1496 aa14.95□□□□□ -0.02
NCAM1-204ENST00000525355 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
NCAM1-204ENST00000525355 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
NCAM1-204ENST00000525355 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
NCAM1-204ENST00000525355 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
NCAM1-204ENST00000525355 ABCA10Q8WWZ4 1543 aa14.91□□□□□ -0.02
NCAM1-204ENST00000525355 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
NCAM1-204ENST00000525355 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
NCAM1-204ENST00000525355 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
NCAM1-204ENST00000525355 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
NCAM1-204ENST00000525355 GRIN2AQ12879 1464 aa14.79□□□□□ -0.04
NCAM1-204ENST00000525355 ADAMTS12P58397 1594 aa14.77□□□□□ -0.05
NCAM1-204ENST00000525355 FHAD1B1AJZ9 1412 aa14.75□□□□□ -0.05
NCAM1-204ENST00000525355 NUP160Q12769 1436 aa14.74□□□□□ -0.05
NCAM1-204ENST00000525355 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
NCAM1-204ENST00000525355 CEP170Q5SW79 1584 aa14.72□□□□□ -0.05
NCAM1-204ENST00000525355 ERCC6L2Q5T890 1561 aa14.69□□□□□ -0.06
NCAM1-204ENST00000525355 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
NCAM1-204ENST00000525355 PRG4Q92954 1404 aaPredicted RBP14.62□□□□□ -0.07
NCAM1-204ENST00000525355 JPH4Q96JJ6 628 aa14.62□□□□□ -0.07
NCAM1-204ENST00000525355 KIF27Q86VH2 1401 aa14.57□□□□□ -0.08
NCAM1-204ENST00000525355 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms