RNA–Protein interactions for RNA: ENST00000525258.1

SOX13-205, Transcript of SRY-box 13, humanhuman

TSL 3

Gene SOX13, Length 744 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX13-205ENST00000525258 NISCHQ9Y2I1 1504 aa37.11■■■■□ 3.53
SOX13-205ENST00000525258 CCDC180Q9P1Z9 1646 aa33.19■■■□□ 2.9
SOX13-205ENST00000525258 ABCC9O60706 1549 aa33.07■■■□□ 2.89
SOX13-205ENST00000525258 RB1CC1Q8TDY2 1594 aa31.52■■■□□ 2.64
SOX13-205ENST00000525258 NACADO15069 1562 aa31.34■■■□□ 2.61
SOX13-205ENST00000525258 DCAF8L2P0C7V8 631 aa31.28■■■□□ 2.6
SOX13-205ENST00000525258 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.55
SOX13-205ENST00000525258 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
SOX13-205ENST00000525258 PABPN1Q86U42 306 aaKnown RBP eCLIP30.82■■■□□ 2.52
SOX13-205ENST00000525258 DNAJC5BQ9UF47 199 aa30.78■■■□□ 2.52
SOX13-205ENST00000525258 UNC13AQ9UPW8 1703 aa30.75■■■□□ 2.51
SOX13-205ENST00000525258 DCAF1Q9Y4B6 1507 aa30.64■■■□□ 2.5
SOX13-205ENST00000525258 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
SOX13-205ENST00000525258 SCRIBQ14160 1630 aa30.34■■■□□ 2.45
SOX13-205ENST00000525258 SHROOM4Q9ULL8 1493 aa30.2■■■□□ 2.43
SOX13-205ENST00000525258 EIF4G1Q04637 1599 aaKnown RBP29.85■■■□□ 2.37
SOX13-205ENST00000525258 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
SOX13-205ENST00000525258 CECR2Q9BXF3 1484 aa29.75■■■□□ 2.35
SOX13-205ENST00000525258 NCAPD3P42695 1498 aa28.92■■■□□ 2.22
SOX13-205ENST00000525258 SMARCA4P51532 1647 aa28.92■■■□□ 2.22
SOX13-205ENST00000525258 ATAD2BQ9ULI0 1458 aa28.9■■■□□ 2.22
SOX13-205ENST00000525258 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
SOX13-205ENST00000525258 BAZ1AQ9NRL2 1556 aaPredicted RBP28.81■■■□□ 2.2
SOX13-205ENST00000525258 HMGXB3Q12766 1538 aa28.76■■■□□ 2.19
SOX13-205ENST00000525258 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
SOX13-205ENST00000525258 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
SOX13-205ENST00000525258 PEG3Q9GZU2 1588 aa28.61■■■□□ 2.17
SOX13-205ENST00000525258 ERCC6Q03468 1493 aa28.55■■■□□ 2.16
SOX13-205ENST00000525258 NESP48681 1621 aa28.46■■■□□ 2.15
SOX13-205ENST00000525258 CUX2O14529 1486 aa28.39■■■□□ 2.13
SOX13-205ENST00000525258 WIZO95785 1651 aa28.27■■■□□ 2.12
SOX13-205ENST00000525258 LAMC3Q9Y6N6 1575 aa28.25■■■□□ 2.11
SOX13-205ENST00000525258 THOC2Q8NI27 1593 aaKnown RBP28.11■■■□□ 2.09
SOX13-205ENST00000525258 RSF1Q96T23 1441 aaPredicted RBP28.1■■■□□ 2.09
SOX13-205ENST00000525258 PDS5BQ9NTI5 1447 aa28.1■■■□□ 2.09
SOX13-205ENST00000525258 DNAJC5Q9H3Z4 198 aa28.09■■■□□ 2.09
SOX13-205ENST00000525258 CADPSQ9ULU8 1353 aa28.08■■■□□ 2.09
SOX13-205ENST00000525258 KIF21AQ7Z4S6 1674 aa28.06■■■□□ 2.08
SOX13-205ENST00000525258 TOP2AP11388 1531 aaKnown RBP27.95■■■□□ 2.06
SOX13-205ENST00000525258 MRC2Q9UBG0 1479 aa27.87■■■□□ 2.05
SOX13-205ENST00000525258 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
SOX13-205ENST00000525258 CFTRP13569 1480 aa27.8■■■□□ 2.04
SOX13-205ENST00000525258 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
SOX13-205ENST00000525258 WDR62O43379 1518 aa27.77■■■□□ 2.04
SOX13-205ENST00000525258 CCDC88BA6NC98 1476 aa27.62■■■□□ 2.01
SOX13-205ENST00000525258 URB2Q14146 1524 aaKnown RBP27.54■■■□□ 2
SOX13-205ENST00000525258 PRDM2Q13029 1718 aa27.48■■□□□ 1.99
SOX13-205ENST00000525258 TOPBP1Q92547 1522 aa27.27■■□□□ 1.96
SOX13-205ENST00000525258 IFT140Q96RY7 1462 aa27.23■■□□□ 1.95
SOX13-205ENST00000525258 DNMBPQ6XZF7 1577 aa27.19■■□□□ 1.94
SOX13-205ENST00000525258 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
SOX13-205ENST00000525258 ZNF608Q9ULD9 1512 aaPredicted RBP27.18■■□□□ 1.94
SOX13-205ENST00000525258 OSCARQ8IYS5 282 aa27.1■■□□□ 1.93
SOX13-205ENST00000525258 EIF4G3O43432 1585 aaKnown RBP27.05■■□□□ 1.92
SOX13-205ENST00000525258 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
SOX13-205ENST00000525258 TRIM41Q8WV44 630 aa27.04■■□□□ 1.92
SOX13-205ENST00000525258 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
SOX13-205ENST00000525258 TARBP1Q13395 1621 aaKnown RBP26.99■■□□□ 1.91
SOX13-205ENST00000525258 AQRO60306 1485 aaKnown RBP eCLIP26.94■■□□□ 1.92e-8■■■■■ 37
SOX13-205ENST00000525258 RAD54L2Q9Y4B4 1467 aa26.92■■□□□ 1.9
SOX13-205ENST00000525258 FGD5Q6ZNL6 1462 aa26.89■■□□□ 1.9
SOX13-205ENST00000525258 CUX1P39880 1505 aa26.89■■□□□ 1.89
SOX13-205ENST00000525258 SOGA1O94964 1423 aa26.88■■□□□ 1.89
SOX13-205ENST00000525258 TDRD9Q8NDG6 1382 aaKnown RBP26.83■■□□□ 1.88
SOX13-205ENST00000525258 CHD1O14646 1710 aa26.76■■□□□ 1.87
SOX13-205ENST00000525258 FBLN2P98095 1184 aa26.75■■□□□ 1.87
SOX13-205ENST00000525258 RIMBP3CA6NJZ7 1639 aa26.75■■□□□ 1.87
SOX13-205ENST00000525258 RIMBP3BA6NNM3 1639 aa26.75■■□□□ 1.87
SOX13-205ENST00000525258 RIMBP3Q9UFD9 1639 aa26.75■■□□□ 1.87
SOX13-205ENST00000525258 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
SOX13-205ENST00000525258 SNAPC4Q5SXM2 1469 aa26.71■■□□□ 1.87
SOX13-205ENST00000525258 ARHGEF11O15085 1522 aa26.7■■□□□ 1.87
SOX13-205ENST00000525258 GRIN2BQ13224 1484 aa26.63■■□□□ 1.85
SOX13-205ENST00000525258 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
SOX13-205ENST00000525258 GAPVD1Q14C86 1478 aa26.57■■□□□ 1.84
SOX13-205ENST00000525258 ABCA10Q8WWZ4 1543 aa26.57■■□□□ 1.84
SOX13-205ENST00000525258 CHMP7Q8WUX9 453 aaPredicted RBP26.56■■□□□ 1.84
SOX13-205ENST00000525258 SYNJ2O15056 1496 aa26.52■■□□□ 1.84
SOX13-205ENST00000525258 WRNQ14191 1432 aaPredicted RBP eCLIP26.52■■□□□ 1.84
SOX13-205ENST00000525258 PBRM1Q86U86 1689 aa26.52■■□□□ 1.84
SOX13-205ENST00000525258 ABCA5Q8WWZ7 1642 aa26.51■■□□□ 1.83
SOX13-205ENST00000525258 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
SOX13-205ENST00000525258 TOP2BQ02880 1626 aa26.49■■□□□ 1.83
SOX13-205ENST00000525258 BIVM-ERCC5R4GMW8 1640 aa26.48■■□□□ 1.83
SOX13-205ENST00000525258 CYB5RLQ6IPT4 315 aa26.48■■□□□ 1.83
SOX13-205ENST00000525258 CLASP1Q7Z460 1538 aa26.48■■□□□ 1.83
SOX13-205ENST00000525258 ARAP1Q96P48 1450 aa26.47■■□□□ 1.83
SOX13-205ENST00000525258 ADAMTS12P58397 1594 aa26.33■■□□□ 1.8
SOX13-205ENST00000525258 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
SOX13-205ENST00000525258 FHAD1B1AJZ9 1412 aa26.24■■□□□ 1.79
SOX13-205ENST00000525258 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
SOX13-205ENST00000525258 NUP160Q12769 1436 aa26.2■■□□□ 1.78
SOX13-205ENST00000525258 CEP170Q5SW79 1584 aa26.2■■□□□ 1.78
SOX13-205ENST00000525258 TRHP20396 242 aaPredicted RBP26.15■■□□□ 1.78
SOX13-205ENST00000525258 ERCC6L2Q5T890 1561 aa26.1■■□□□ 1.77
SOX13-205ENST00000525258 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
SOX13-205ENST00000525258 KIF27Q86VH2 1401 aa26■■□□□ 1.75
SOX13-205ENST00000525258 RUSC2Q8N2Y8 1516 aa25.95■■□□□ 1.74
SOX13-205ENST00000525258 PRG4Q92954 1404 aaPredicted RBP25.94■■□□□ 1.74
SOX13-205ENST00000525258 IGF1RP08069 1367 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms