RNA–Protein interactions for RNA: ENST00000525208.1

GSDMD-203, Transcript of gasdermin D, humanhuman

TSL 3

Gene GSDMD, Length 691 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-203ENST00000525208 NISCHQ9Y2I1 1504 aa51.86■■■■■ 5.89
GSDMD-203ENST00000525208 CCDC180Q9P1Z9 1646 aa46.26■■■■■ 5
GSDMD-203ENST00000525208 ABCC9O60706 1549 aa45.78■■■■■ 4.92
GSDMD-203ENST00000525208 RB1CC1Q8TDY2 1594 aa43.78■■■■■ 4.6
GSDMD-203ENST00000525208 NACADO15069 1562 aa43.63■■■■■ 4.57
GSDMD-203ENST00000525208 DCAF8L2P0C7V8 631 aa43.59■■■■■ 4.57
GSDMD-203ENST00000525208 MYO15BQ96JP2 1530 aa43.19■■■■■ 4.5
GSDMD-203ENST00000525208 ZCCHC6Q5VYS8 1495 aaKnown RBP43.06■■■■■ 4.48
GSDMD-203ENST00000525208 UNC13AQ9UPW8 1703 aa42.88■■■■■ 4.45
GSDMD-203ENST00000525208 DCAF1Q9Y4B6 1507 aa42.84■■■■■ 4.45
GSDMD-203ENST00000525208 PABPN1Q86U42 306 aaKnown RBP eCLIP42.75■■■■■ 4.435e-7■■■■■ 27.2
GSDMD-203ENST00000525208 DNAJC5BQ9UF47 199 aa42.57■■■■■ 4.41
GSDMD-203ENST00000525208 BICRAQ9NZM4 1560 aa42.54■■■■■ 4.4
GSDMD-203ENST00000525208 SCRIBQ14160 1630 aa42.2■■■■■ 4.35
GSDMD-203ENST00000525208 SHROOM4Q9ULL8 1493 aa41.92■■■■■ 4.3
GSDMD-203ENST00000525208 EIF4G1Q04637 1599 aaKnown RBP41.42■■■■■ 4.22
GSDMD-203ENST00000525208 CC2D2AQ9P2K1 1620 aa41.39■■■■■ 4.22
GSDMD-203ENST00000525208 CECR2Q9BXF3 1484 aa41.17■■■■■ 4.18
GSDMD-203ENST00000525208 SMARCA4P51532 1647 aa40.33■■■■■ 4.05
GSDMD-203ENST00000525208 NCAPD3P42695 1498 aa40.29■■■■■ 4.04
GSDMD-203ENST00000525208 ATAD2BQ9ULI0 1458 aa40.25■■■■■ 4.03
GSDMD-203ENST00000525208 BAZ1AQ9NRL2 1556 aaPredicted RBP40.18■■■■■ 4.02
GSDMD-203ENST00000525208 SMARCA2P51531 1590 aa40.13■■■■■ 4.01
GSDMD-203ENST00000525208 HMGXB3Q12766 1538 aa40■■■■□ 3.99
GSDMD-203ENST00000525208 MROH2BQ7Z745 1585 aa39.98■■■■□ 3.99
GSDMD-203ENST00000525208 PEG3Q9GZU2 1588 aa39.93■■■■□ 3.98
GSDMD-203ENST00000525208 BAZ1BQ9UIG0 1483 aaKnown RBP39.85■■■■□ 3.97
GSDMD-203ENST00000525208 WIZO95785 1651 aa39.54■■■■□ 3.92
GSDMD-203ENST00000525208 NESP48681 1621 aa39.51■■■■□ 3.91
GSDMD-203ENST00000525208 ERCC6Q03468 1493 aa39.44■■■■□ 3.9
GSDMD-203ENST00000525208 RSF1Q96T23 1441 aaPredicted RBP39.35■■■■□ 3.89
GSDMD-203ENST00000525208 LAMC3Q9Y6N6 1575 aa39.27■■■■□ 3.88
GSDMD-203ENST00000525208 CUX2O14529 1486 aa39.19■■■■□ 3.86
GSDMD-203ENST00000525208 CADPSQ9ULU8 1353 aa39.09■■■■□ 3.85
GSDMD-203ENST00000525208 PDS5BQ9NTI5 1447 aa39.03■■■■□ 3.84
GSDMD-203ENST00000525208 TOP2AP11388 1531 aaKnown RBP39.02■■■■□ 3.84
GSDMD-203ENST00000525208 KIF21AQ7Z4S6 1674 aa39■■■■□ 3.83
GSDMD-203ENST00000525208 THOC2Q8NI27 1593 aaKnown RBP38.95■■■■□ 3.83
GSDMD-203ENST00000525208 CFTRP13569 1480 aa38.75■■■■□ 3.79
GSDMD-203ENST00000525208 DNAJC5Q9H3Z4 198 aa38.65■■■■□ 3.78
GSDMD-203ENST00000525208 MRC2Q9UBG0 1479 aa38.65■■■■□ 3.78
GSDMD-203ENST00000525208 CCDC88BA6NC98 1476 aa38.63■■■■□ 3.77
GSDMD-203ENST00000525208 FANCD2Q9BXW9 1451 aa38.63■■■■□ 3.77
GSDMD-203ENST00000525208 CEP164Q9UPV0 1460 aa38.6■■■■□ 3.77
GSDMD-203ENST00000525208 WDR62O43379 1518 aa38.54■■■■□ 3.76
GSDMD-203ENST00000525208 PRDM2Q13029 1718 aa38.41■■■■□ 3.74
GSDMD-203ENST00000525208 URB2Q14146 1524 aaKnown RBP38.3■■■■□ 3.72
GSDMD-203ENST00000525208 SUPT5HO00267 1087 aaKnown RBP38.04■■■■□ 3.68
GSDMD-203ENST00000525208 TOPBP1Q92547 1522 aa37.97■■■■□ 3.67
GSDMD-203ENST00000525208 ABCC8Q09428 1581 aa37.9■■■■□ 3.66
GSDMD-203ENST00000525208 DNMBPQ6XZF7 1577 aa37.86■■■■□ 3.65
GSDMD-203ENST00000525208 IFT140Q96RY7 1462 aa37.82■■■■□ 3.64
GSDMD-203ENST00000525208 ZNF608Q9ULD9 1512 aaPredicted RBP37.75■■■■□ 3.63
GSDMD-203ENST00000525208 POLA1P09884 1462 aaPredicted RBP37.61■■■■□ 3.61
GSDMD-203ENST00000525208 TARBP1Q13395 1621 aaKnown RBP37.61■■■■□ 3.61
GSDMD-203ENST00000525208 OSCARQ8IYS5 282 aa37.56■■■■□ 3.6
GSDMD-203ENST00000525208 CUX1P39880 1505 aa37.53■■■■□ 3.6
GSDMD-203ENST00000525208 EIF4G3O43432 1585 aaKnown RBP37.52■■■■□ 3.6
GSDMD-203ENST00000525208 RAD54L2Q9Y4B4 1467 aa37.5■■■■□ 3.59
GSDMD-203ENST00000525208 AQRO60306 1485 aaKnown RBP eCLIP37.48■■■■□ 3.59
GSDMD-203ENST00000525208 SOGA1O94964 1423 aa37.47■■■■□ 3.59
GSDMD-203ENST00000525208 FGD5Q6ZNL6 1462 aa37.45■■■■□ 3.59
GSDMD-203ENST00000525208 TDRD9Q8NDG6 1382 aaKnown RBP37.34■■■■□ 3.57
GSDMD-203ENST00000525208 WDR97A6NE52 1622 aa37.2■■■■□ 3.55
GSDMD-203ENST00000525208 CHD1O14646 1710 aa37.19■■■■□ 3.54
GSDMD-203ENST00000525208 TRIM41Q8WV44 630 aa37.15■■■■□ 3.54
GSDMD-203ENST00000525208 FBLN2P98095 1184 aa37.12■■■■□ 3.53
GSDMD-203ENST00000525208 WRNQ14191 1432 aaPredicted RBP eCLIP37.09■■■■□ 3.53
GSDMD-203ENST00000525208 SNAPC4Q5SXM2 1469 aa37.07■■■■□ 3.53
GSDMD-203ENST00000525208 ABCA10Q8WWZ4 1543 aa37.06■■■■□ 3.52
GSDMD-203ENST00000525208 TOP2BQ02880 1626 aa37.05■■■■□ 3.52
GSDMD-203ENST00000525208 BIVM-ERCC5R4GMW8 1640 aa37.05■■■■□ 3.52
GSDMD-203ENST00000525208 GRIN2BQ13224 1484 aa37.05■■■■□ 3.52
GSDMD-203ENST00000525208 SYNJ1O43426 1573 aa37.04■■■■□ 3.52
GSDMD-203ENST00000525208 GAPVD1Q14C86 1478 aa37.01■■■■□ 3.52
GSDMD-203ENST00000525208 MAGI1Q96QZ7 1491 aaPredicted RBP36.99■■■■□ 3.51
GSDMD-203ENST00000525208 RIMBP3CA6NJZ7 1639 aa36.99■■■■□ 3.51
GSDMD-203ENST00000525208 RIMBP3BA6NNM3 1639 aa36.99■■■■□ 3.51
GSDMD-203ENST00000525208 RIMBP3Q9UFD9 1639 aa36.99■■■■□ 3.51
GSDMD-203ENST00000525208 PBRM1Q86U86 1689 aa36.96■■■■□ 3.51
GSDMD-203ENST00000525208 ABCA5Q8WWZ7 1642 aa36.95■■■■□ 3.51
GSDMD-203ENST00000525208 CHMP7Q8WUX9 453 aaPredicted RBP36.93■■■■□ 3.5
GSDMD-203ENST00000525208 ARHGEF11O15085 1522 aa36.91■■■■□ 3.5
GSDMD-203ENST00000525208 SYNJ2O15056 1496 aa36.86■■■■□ 3.49
GSDMD-203ENST00000525208 CLASP1Q7Z460 1538 aa36.75■■■■□ 3.47
GSDMD-203ENST00000525208 CYB5RLQ6IPT4 315 aa36.66■■■■□ 3.46
GSDMD-203ENST00000525208 ADAMTS12P58397 1594 aa36.61■■■■□ 3.45
GSDMD-203ENST00000525208 ARAP1Q96P48 1450 aa36.6■■■■□ 3.45
GSDMD-203ENST00000525208 ERICH3Q5RHP9 1530 aa36.59■■■■□ 3.45
GSDMD-203ENST00000525208 GRIN2AQ12879 1464 aa36.58■■■■□ 3.45
GSDMD-203ENST00000525208 FHAD1B1AJZ9 1412 aa36.55■■■■□ 3.44
GSDMD-203ENST00000525208 NUP160Q12769 1436 aa36.44■■■■□ 3.42
GSDMD-203ENST00000525208 CEP170Q5SW79 1584 aa36.44■■■■□ 3.42
GSDMD-203ENST00000525208 KIF27Q86VH2 1401 aa36.34■■■■□ 3.41
GSDMD-203ENST00000525208 IGF1RP08069 1367 aa36.31■■■■□ 3.4
GSDMD-203ENST00000525208 ERCC6L2Q5T890 1561 aa36.26■■■■□ 3.39
GSDMD-203ENST00000525208 SHROOM2Q13796 1616 aa36.23■■■■□ 3.39
GSDMD-203ENST00000525208 CUL7Q14999 1698 aa36.15■■■■□ 3.38
GSDMD-203ENST00000525208 JPH4Q96JJ6 628 aa36.13■■■■□ 3.37
GSDMD-203ENST00000525208 RUSC2Q8N2Y8 1516 aa36.08■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms