RNA–Protein interactions for RNA: ENST00000525092.1

ARHGEF4-211, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene ARHGEF4, Length 769 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-211ENST00000525092 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.26
ARHGEF4-211ENST00000525092 CCDC180Q9P1Z9 1646 aa26.45■■□□□ 1.82
ARHGEF4-211ENST00000525092 ABCC9O60706 1549 aa26.26■■□□□ 1.79
ARHGEF4-211ENST00000525092 RB1CC1Q8TDY2 1594 aa25.15■■□□□ 1.62
ARHGEF4-211ENST00000525092 NACADO15069 1562 aa24.96■■□□□ 1.59
ARHGEF4-211ENST00000525092 MYO15BQ96JP2 1530 aa24.63■■□□□ 1.53
ARHGEF4-211ENST00000525092 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
ARHGEF4-211ENST00000525092 UNC13AQ9UPW8 1703 aa24.61■■□□□ 1.53
ARHGEF4-211ENST00000525092 DCAF8L2P0C7V8 631 aa24.46■■□□□ 1.51
ARHGEF4-211ENST00000525092 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
ARHGEF4-211ENST00000525092 PABPN1Q86U42 306 aaKnown RBP eCLIP24.31■■□□□ 1.48
ARHGEF4-211ENST00000525092 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
ARHGEF4-211ENST00000525092 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
ARHGEF4-211ENST00000525092 ZCCHC6Q5VYS8 1495 aaKnown RBP24.18■■□□□ 1.46
ARHGEF4-211ENST00000525092 SCRIBQ14160 1630 aa23.86■■□□□ 1.41
ARHGEF4-211ENST00000525092 CC2D2AQ9P2K1 1620 aa23.83■■□□□ 1.41
ARHGEF4-211ENST00000525092 EIF4G1Q04637 1599 aaKnown RBP23.76■■□□□ 1.39
ARHGEF4-211ENST00000525092 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
ARHGEF4-211ENST00000525092 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
ARHGEF4-211ENST00000525092 SMARCA2P51531 1590 aa22.88■■□□□ 1.25
ARHGEF4-211ENST00000525092 CUX2O14529 1486 aa22.87■■□□□ 1.25
ARHGEF4-211ENST00000525092 DNAJC5Q9H3Z4 198 aa22.86■■□□□ 1.25
ARHGEF4-211ENST00000525092 HMGXB3Q12766 1538 aa22.86■■□□□ 1.25
ARHGEF4-211ENST00000525092 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
ARHGEF4-211ENST00000525092 ATAD2BQ9ULI0 1458 aa22.82■■□□□ 1.24
ARHGEF4-211ENST00000525092 ERCC6Q03468 1493 aa22.77■■□□□ 1.24
ARHGEF4-211ENST00000525092 BAZ1AQ9NRL2 1556 aaPredicted RBP22.73■■□□□ 1.23
ARHGEF4-211ENST00000525092 PEG3Q9GZU2 1588 aa22.68■■□□□ 1.22
ARHGEF4-211ENST00000525092 BAZ1BQ9UIG0 1483 aaKnown RBP22.63■■□□□ 1.21
ARHGEF4-211ENST00000525092 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
ARHGEF4-211ENST00000525092 NESP48681 1621 aa22.5■■□□□ 1.19
ARHGEF4-211ENST00000525092 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
ARHGEF4-211ENST00000525092 MROH2BQ7Z745 1585 aa22.42■■□□□ 1.18
ARHGEF4-211ENST00000525092 KIF21AQ7Z4S6 1674 aa22.38■■□□□ 1.17
ARHGEF4-211ENST00000525092 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
ARHGEF4-211ENST00000525092 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
ARHGEF4-211ENST00000525092 WIZO95785 1651 aa22.18■■□□□ 1.14
ARHGEF4-211ENST00000525092 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
ARHGEF4-211ENST00000525092 WDR62O43379 1518 aa22.13■■□□□ 1.13
ARHGEF4-211ENST00000525092 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
ARHGEF4-211ENST00000525092 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
ARHGEF4-211ENST00000525092 CFTRP13569 1480 aa21.96■■□□□ 1.11
ARHGEF4-211ENST00000525092 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
ARHGEF4-211ENST00000525092 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
ARHGEF4-211ENST00000525092 RSF1Q96T23 1441 aaPredicted RBP21.9■■□□□ 1.1
ARHGEF4-211ENST00000525092 URB2Q14146 1524 aaKnown RBP21.76■■□□□ 1.07
ARHGEF4-211ENST00000525092 OSCARQ8IYS5 282 aa21.69■■□□□ 1.06
ARHGEF4-211ENST00000525092 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
ARHGEF4-211ENST00000525092 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
ARHGEF4-211ENST00000525092 IFT140Q96RY7 1462 aa21.62■■□□□ 1.05
ARHGEF4-211ENST00000525092 CCDC88BA6NC98 1476 aa21.61■■□□□ 1.05
ARHGEF4-211ENST00000525092 TOPBP1Q92547 1522 aa21.55■■□□□ 1.04
ARHGEF4-211ENST00000525092 DNMBPQ6XZF7 1577 aa21.52■■□□□ 1.04
ARHGEF4-211ENST00000525092 RIMBP3CA6NJZ7 1639 aa21.47■■□□□ 1.03
ARHGEF4-211ENST00000525092 RIMBP3BA6NNM3 1639 aa21.47■■□□□ 1.03
ARHGEF4-211ENST00000525092 RIMBP3Q9UFD9 1639 aa21.47■■□□□ 1.03
ARHGEF4-211ENST00000525092 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
ARHGEF4-211ENST00000525092 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
ARHGEF4-211ENST00000525092 TARBP1Q13395 1621 aaKnown RBP21.41■■□□□ 1.02
ARHGEF4-211ENST00000525092 CHD1O14646 1710 aa21.38■■□□□ 1.01
ARHGEF4-211ENST00000525092 ARHGEF11O15085 1522 aa21.37■■□□□ 1.01
ARHGEF4-211ENST00000525092 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
ARHGEF4-211ENST00000525092 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
ARHGEF4-211ENST00000525092 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.99
ARHGEF4-211ENST00000525092 SOGA1O94964 1423 aa21.18■□□□□ 0.98
ARHGEF4-211ENST00000525092 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
ARHGEF4-211ENST00000525092 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
ARHGEF4-211ENST00000525092 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
ARHGEF4-211ENST00000525092 SYNJ1O43426 1573 aa21.12■□□□□ 0.97
ARHGEF4-211ENST00000525092 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
ARHGEF4-211ENST00000525092 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
ARHGEF4-211ENST00000525092 CUX1P39880 1505 aa21.09■□□□□ 0.97
ARHGEF4-211ENST00000525092 FBLN2P98095 1184 aa21.09■□□□□ 0.97
ARHGEF4-211ENST00000525092 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
ARHGEF4-211ENST00000525092 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.97
ARHGEF4-211ENST00000525092 TDRD9Q8NDG6 1382 aaKnown RBP21.08■□□□□ 0.96
ARHGEF4-211ENST00000525092 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
ARHGEF4-211ENST00000525092 PBRM1Q86U86 1689 aa21.07■□□□□ 0.96
ARHGEF4-211ENST00000525092 SYNJ2O15056 1496 aa21.03■□□□□ 0.96
ARHGEF4-211ENST00000525092 CHMP7Q8WUX9 453 aaPredicted RBP21■□□□□ 0.95
ARHGEF4-211ENST00000525092 GAPVD1Q14C86 1478 aa20.96■□□□□ 0.95
ARHGEF4-211ENST00000525092 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
ARHGEF4-211ENST00000525092 ABCA10Q8WWZ4 1543 aa20.95■□□□□ 0.94
ARHGEF4-211ENST00000525092 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
ARHGEF4-211ENST00000525092 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
ARHGEF4-211ENST00000525092 WRNQ14191 1432 aaPredicted RBP eCLIP20.83■□□□□ 0.93
ARHGEF4-211ENST00000525092 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
ARHGEF4-211ENST00000525092 GRIN2AQ12879 1464 aa20.79■□□□□ 0.92
ARHGEF4-211ENST00000525092 ADAMTS12P58397 1594 aa20.79■□□□□ 0.92
ARHGEF4-211ENST00000525092 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
ARHGEF4-211ENST00000525092 NUP160Q12769 1436 aa20.73■□□□□ 0.91
ARHGEF4-211ENST00000525092 SHROOM2Q13796 1616 aa20.73■□□□□ 0.91
ARHGEF4-211ENST00000525092 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
ARHGEF4-211ENST00000525092 CEP170Q5SW79 1584 aa20.7■□□□□ 0.9
ARHGEF4-211ENST00000525092 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
ARHGEF4-211ENST00000525092 ERCC6L2Q5T890 1561 aa20.61■□□□□ 0.89
ARHGEF4-211ENST00000525092 KIF13AQ9H1H9 1805 aa20.54■□□□□ 0.88
ARHGEF4-211ENST00000525092 RUSC2Q8N2Y8 1516 aa20.51■□□□□ 0.87
ARHGEF4-211ENST00000525092 PRG4Q92954 1404 aaPredicted RBP20.48■□□□□ 0.87
ARHGEF4-211ENST00000525092 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms