RNA–Protein interactions for RNA: ENST00000525083.5

FOXRED1-203, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 1,228 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-203ENST00000525083 NISCHQ9Y2I1 1504 aa42.46■■■■■ 4.39
FOXRED1-203ENST00000525083 CCDC180Q9P1Z9 1646 aa37.73■■■■□ 3.63
FOXRED1-203ENST00000525083 ABCC9O60706 1549 aa37.03■■■■□ 3.52
FOXRED1-203ENST00000525083 DCAF8L2P0C7V8 631 aa35.6■■■■□ 3.29
FOXRED1-203ENST00000525083 RB1CC1Q8TDY2 1594 aa35.55■■■■□ 3.28
FOXRED1-203ENST00000525083 NACADO15069 1562 aa35.48■■■■□ 3.27
FOXRED1-203ENST00000525083 ZCCHC6Q5VYS8 1495 aaKnown RBP35.35■■■■□ 3.25
FOXRED1-203ENST00000525083 MYO15BQ96JP2 1530 aa35.22■■■■□ 3.23
FOXRED1-203ENST00000525083 DCAF1Q9Y4B6 1507 aa35.07■■■■□ 3.21
FOXRED1-203ENST00000525083 UNC13AQ9UPW8 1703 aa34.78■■■■□ 3.16
FOXRED1-203ENST00000525083 PABPN1Q86U42 306 aaKnown RBP eCLIP34.62■■■■□ 3.13
FOXRED1-203ENST00000525083 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
FOXRED1-203ENST00000525083 BICRAQ9NZM4 1560 aa34.49■■■■□ 3.11
FOXRED1-203ENST00000525083 SHROOM4Q9ULL8 1493 aa34.05■■■■□ 3.04
FOXRED1-203ENST00000525083 DNAJC5BQ9UF47 199 aa34■■■■□ 3.03
FOXRED1-203ENST00000525083 EIF4G1Q04637 1599 aaKnown RBP33.59■■■□□ 2.97
FOXRED1-203ENST00000525083 CC2D2AQ9P2K1 1620 aa33.46■■■□□ 2.95
FOXRED1-203ENST00000525083 CECR2Q9BXF3 1484 aa33.25■■■□□ 2.91
FOXRED1-203ENST00000525083 SMARCA4P51532 1647 aa32.96■■■□□ 2.87
FOXRED1-203ENST00000525083 BAZ1AQ9NRL2 1556 aaPredicted RBP32.91■■■□□ 2.86
FOXRED1-203ENST00000525083 ATAD2BQ9ULI0 1458 aa32.78■■■□□ 2.84
FOXRED1-203ENST00000525083 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
FOXRED1-203ENST00000525083 NCAPD3P42695 1498 aa32.74■■■□□ 2.83
FOXRED1-203ENST00000525083 SMARCA2P51531 1590 aa32.72■■■□□ 2.83
FOXRED1-203ENST00000525083 PEG3Q9GZU2 1588 aa32.59■■■□□ 2.81
FOXRED1-203ENST00000525083 HMGXB3Q12766 1538 aa32.58■■■□□ 2.81
FOXRED1-203ENST00000525083 BAZ1BQ9UIG0 1483 aaKnown RBP32.54■■■□□ 2.8
FOXRED1-203ENST00000525083 WIZO95785 1651 aa32.42■■■□□ 2.78
FOXRED1-203ENST00000525083 RSF1Q96T23 1441 aaPredicted RBP32.35■■■□□ 2.77
FOXRED1-203ENST00000525083 NESP48681 1621 aa32.04■■■□□ 2.72
FOXRED1-203ENST00000525083 TOP2AP11388 1531 aaKnown RBP32.03■■■□□ 2.72
FOXRED1-203ENST00000525083 ERCC6Q03468 1493 aa31.91■■■□□ 2.7
FOXRED1-203ENST00000525083 LAMC3Q9Y6N6 1575 aa31.9■■■□□ 2.7
FOXRED1-203ENST00000525083 CADPSQ9ULU8 1353 aa31.81■■■□□ 2.68
FOXRED1-203ENST00000525083 PDS5BQ9NTI5 1447 aa31.69■■■□□ 2.66
FOXRED1-203ENST00000525083 CCDC88BA6NC98 1476 aa31.67■■■□□ 2.66
FOXRED1-203ENST00000525083 KIF21AQ7Z4S6 1674 aa31.64■■■□□ 2.66
FOXRED1-203ENST00000525083 CFTRP13569 1480 aa31.6■■■□□ 2.65
FOXRED1-203ENST00000525083 SUPT5HO00267 1087 aaKnown RBP31.6■■■□□ 2.65
FOXRED1-203ENST00000525083 CUX2O14529 1486 aa31.52■■■□□ 2.64
FOXRED1-203ENST00000525083 THOC2Q8NI27 1593 aaKnown RBP31.52■■■□□ 2.64
FOXRED1-203ENST00000525083 FANCD2Q9BXW9 1451 aa31.46■■■□□ 2.63
FOXRED1-203ENST00000525083 CEP164Q9UPV0 1460 aa31.42■■■□□ 2.62
FOXRED1-203ENST00000525083 MRC2Q9UBG0 1479 aa31.38■■■□□ 2.61
FOXRED1-203ENST00000525083 PRDM2Q13029 1718 aa31.37■■■□□ 2.61
FOXRED1-203ENST00000525083 WDR62O43379 1518 aa31.26■■■□□ 2.59
FOXRED1-203ENST00000525083 URB2Q14146 1524 aaKnown RBP31.15■■■□□ 2.58
FOXRED1-203ENST00000525083 TOPBP1Q92547 1522 aa30.95■■■□□ 2.55
FOXRED1-203ENST00000525083 ABCC8Q09428 1581 aa30.91■■■□□ 2.54
FOXRED1-203ENST00000525083 DNMBPQ6XZF7 1577 aa30.91■■■□□ 2.54
FOXRED1-203ENST00000525083 IFT140Q96RY7 1462 aa30.75■■■□□ 2.51
FOXRED1-203ENST00000525083 CUX1P39880 1505 aa30.72■■■□□ 2.51
FOXRED1-203ENST00000525083 POLA1P09884 1462 aaPredicted RBP30.69■■■□□ 2.5
FOXRED1-203ENST00000525083 ZNF608Q9ULD9 1512 aaPredicted RBP30.66■■■□□ 2.5
FOXRED1-203ENST00000525083 FGD5Q6ZNL6 1462 aa30.63■■■□□ 2.49
FOXRED1-203ENST00000525083 DNAJC5Q9H3Z4 198 aa30.61■■■□□ 2.49
FOXRED1-203ENST00000525083 TARBP1Q13395 1621 aaKnown RBP30.61■■■□□ 2.49
FOXRED1-203ENST00000525083 RAD54L2Q9Y4B4 1467 aa30.59■■■□□ 2.49
FOXRED1-203ENST00000525083 SOGA1O94964 1423 aa30.57■■■□□ 2.48
FOXRED1-203ENST00000525083 EIF4G3O43432 1585 aaKnown RBP30.53■■■□□ 2.48
FOXRED1-203ENST00000525083 WRNQ14191 1432 aaPredicted RBP eCLIP30.51■■■□□ 2.47
FOXRED1-203ENST00000525083 AQRO60306 1485 aaKnown RBP eCLIP30.48■■■□□ 2.472e-10■■■■■ 41.8
FOXRED1-203ENST00000525083 SYNJ1O43426 1573 aa30.45■■■□□ 2.47
FOXRED1-203ENST00000525083 TOP2BQ02880 1626 aa30.44■■■□□ 2.46
FOXRED1-203ENST00000525083 TDRD9Q8NDG6 1382 aaKnown RBP30.43■■■□□ 2.46
FOXRED1-203ENST00000525083 BIVM-ERCC5R4GMW8 1640 aa30.43■■■□□ 2.46
FOXRED1-203ENST00000525083 WDR97A6NE52 1622 aa30.35■■■□□ 2.45
FOXRED1-203ENST00000525083 ABCA10Q8WWZ4 1543 aa30.29■■■□□ 2.44
FOXRED1-203ENST00000525083 OSCARQ8IYS5 282 aa30.25■■■□□ 2.43
FOXRED1-203ENST00000525083 GAPVD1Q14C86 1478 aa30.21■■■□□ 2.43
FOXRED1-203ENST00000525083 GRIN2BQ13224 1484 aa30.2■■■□□ 2.43
FOXRED1-203ENST00000525083 SNAPC4Q5SXM2 1469 aa30.19■■■□□ 2.42
FOXRED1-203ENST00000525083 ABCA5Q8WWZ7 1642 aa30.19■■■□□ 2.42
FOXRED1-203ENST00000525083 PBRM1Q86U86 1689 aa30.17■■■□□ 2.42
FOXRED1-203ENST00000525083 FBLN2P98095 1184 aa30.16■■■□□ 2.42
FOXRED1-203ENST00000525083 CHD1O14646 1710 aa30.16■■■□□ 2.42
FOXRED1-203ENST00000525083 MAGI1Q96QZ7 1491 aaPredicted RBP30.11■■■□□ 2.41
FOXRED1-203ENST00000525083 CHMP7Q8WUX9 453 aaPredicted RBP30.03■■■□□ 2.4
FOXRED1-203ENST00000525083 SYNJ2O15056 1496 aa30■■■□□ 2.39
FOXRED1-203ENST00000525083 ERICH3Q5RHP9 1530 aa29.93■■■□□ 2.38
FOXRED1-203ENST00000525083 ADAMTS12P58397 1594 aa29.92■■■□□ 2.38
FOXRED1-203ENST00000525083 KIF27Q86VH2 1401 aa29.87■■■□□ 2.37
FOXRED1-203ENST00000525083 FHAD1B1AJZ9 1412 aa29.85■■■□□ 2.37
FOXRED1-203ENST00000525083 GRIN2AQ12879 1464 aa29.82■■■□□ 2.36
FOXRED1-203ENST00000525083 TRIM41Q8WV44 630 aa29.81■■■□□ 2.36
FOXRED1-203ENST00000525083 CLASP1Q7Z460 1538 aa29.79■■■□□ 2.36
FOXRED1-203ENST00000525083 RIMBP3CA6NJZ7 1639 aa29.78■■■□□ 2.36
FOXRED1-203ENST00000525083 RIMBP3BA6NNM3 1639 aa29.78■■■□□ 2.36
FOXRED1-203ENST00000525083 RIMBP3Q9UFD9 1639 aa29.78■■■□□ 2.36
FOXRED1-203ENST00000525083 ARHGEF11O15085 1522 aa29.76■■■□□ 2.36
FOXRED1-203ENST00000525083 IGF1RP08069 1367 aa29.75■■■□□ 2.35
FOXRED1-203ENST00000525083 CEP170Q5SW79 1584 aa29.69■■■□□ 2.34
FOXRED1-203ENST00000525083 NUP160Q12769 1436 aa29.67■■■□□ 2.34
FOXRED1-203ENST00000525083 CUL7Q14999 1698 aa29.66■■■□□ 2.34
FOXRED1-203ENST00000525083 RUSC2Q8N2Y8 1516 aa29.64■■■□□ 2.34
FOXRED1-203ENST00000525083 CARMIL1Q5VZK9 1371 aa29.58■■■□□ 2.33
FOXRED1-203ENST00000525083 ARAP1Q96P48 1450 aa29.53■■■□□ 2.32
FOXRED1-203ENST00000525083 CYB5RLQ6IPT4 315 aa29.52■■■□□ 2.32
FOXRED1-203ENST00000525083 SHROOM2Q13796 1616 aa29.45■■■□□ 2.3
FOXRED1-203ENST00000525083 ERCC6L2Q5T890 1561 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms