RNA–Protein interactions for RNA: ENST00000524966.1

AP001001.2-201, humanhuman

TSL 3 BASIC

Gene AP001001.2, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001001.2-201ENST00000524966 NISCHQ9Y2I1 1504 aa26.34■■□□□ 1.81
AP001001.2-201ENST00000524966 AEBP2Q6ZN18 517 aaPredicted RBP24.12■■□□□ 1.45
AP001001.2-201ENST00000524966 CCDC180Q9P1Z9 1646 aa23.36■■□□□ 1.33
AP001001.2-201ENST00000524966 ABCC9O60706 1549 aa22.98■■□□□ 1.27
AP001001.2-201ENST00000524966 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
AP001001.2-201ENST00000524966 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.13
AP001001.2-201ENST00000524966 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
AP001001.2-201ENST00000524966 NACADO15069 1562 aa22.03■■□□□ 1.12
AP001001.2-201ENST00000524966 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
AP001001.2-201ENST00000524966 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
AP001001.2-201ENST00000524966 DCAF1Q9Y4B6 1507 aa21.78■■□□□ 1.08
AP001001.2-201ENST00000524966 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
AP001001.2-201ENST00000524966 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
AP001001.2-201ENST00000524966 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
AP001001.2-201ENST00000524966 SCRIBQ14160 1630 aa21.33■■□□□ 1
AP001001.2-201ENST00000524966 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
AP001001.2-201ENST00000524966 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
AP001001.2-201ENST00000524966 SENP3Q9H4L4 574 aaPredicted RBP20.91■□□□□ 0.94
AP001001.2-201ENST00000524966 EIF4G1Q04637 1599 aaKnown RBP20.83■□□□□ 0.92
AP001001.2-201ENST00000524966 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
AP001001.2-201ENST00000524966 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
AP001001.2-201ENST00000524966 PHF23Q9BUL5 403 aaPredicted RBP20.45■□□□□ 0.86
AP001001.2-201ENST00000524966 SMARCA4P51532 1647 aa20.41■□□□□ 0.86
AP001001.2-201ENST00000524966 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
AP001001.2-201ENST00000524966 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
AP001001.2-201ENST00000524966 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
AP001001.2-201ENST00000524966 MROH2BQ7Z745 1585 aa20.31■□□□□ 0.84
AP001001.2-201ENST00000524966 SMARCA2P51531 1590 aa20.29■□□□□ 0.84
AP001001.2-201ENST00000524966 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
AP001001.2-201ENST00000524966 HMGXB3Q12766 1538 aa20.2■□□□□ 0.82
AP001001.2-201ENST00000524966 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
AP001001.2-201ENST00000524966 RSF1Q96T23 1441 aaPredicted RBP20.09■□□□□ 0.81
AP001001.2-201ENST00000524966 WIZO95785 1651 aa20.07■□□□□ 0.8
AP001001.2-201ENST00000524966 NESP48681 1621 aa19.88■□□□□ 0.77
AP001001.2-201ENST00000524966 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
AP001001.2-201ENST00000524966 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
AP001001.2-201ENST00000524966 LAMC3Q9Y6N6 1575 aa19.78■□□□□ 0.76
AP001001.2-201ENST00000524966 ERCC6Q03468 1493 aa19.77■□□□□ 0.76
AP001001.2-201ENST00000524966 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
AP001001.2-201ENST00000524966 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
AP001001.2-201ENST00000524966 CFTRP13569 1480 aa19.64■□□□□ 0.73
AP001001.2-201ENST00000524966 CUX2O14529 1486 aa19.59■□□□□ 0.73
AP001001.2-201ENST00000524966 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.72
AP001001.2-201ENST00000524966 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
AP001001.2-201ENST00000524966 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
AP001001.2-201ENST00000524966 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.72
AP001001.2-201ENST00000524966 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
AP001001.2-201ENST00000524966 MRC2Q9UBG0 1479 aa19.46■□□□□ 0.71
AP001001.2-201ENST00000524966 FOXD1Q16676 465 aa19.4■□□□□ 0.7
AP001001.2-201ENST00000524966 WDR62O43379 1518 aa19.39■□□□□ 0.69
AP001001.2-201ENST00000524966 PRDM2Q13029 1718 aa19.38■□□□□ 0.69
AP001001.2-201ENST00000524966 URB2Q14146 1524 aaKnown RBP19.33■□□□□ 0.68
AP001001.2-201ENST00000524966 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
AP001001.2-201ENST00000524966 ABCC8Q09428 1581 aa19.19■□□□□ 0.66
AP001001.2-201ENST00000524966 DNAJC5Q9H3Z4 198 aa19.15■□□□□ 0.66
AP001001.2-201ENST00000524966 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
AP001001.2-201ENST00000524966 IFT140Q96RY7 1462 aa19.08■□□□□ 0.64
AP001001.2-201ENST00000524966 CUX1P39880 1505 aa19.04■□□□□ 0.64
AP001001.2-201ENST00000524966 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
AP001001.2-201ENST00000524966 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
AP001001.2-201ENST00000524966 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
AP001001.2-201ENST00000524966 SOGA1O94964 1423 aa18.99■□□□□ 0.63
AP001001.2-201ENST00000524966 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
AP001001.2-201ENST00000524966 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
AP001001.2-201ENST00000524966 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
AP001001.2-201ENST00000524966 AQRO60306 1485 aaKnown RBP eCLIP18.93■□□□□ 0.62
AP001001.2-201ENST00000524966 TDRD9Q8NDG6 1382 aaKnown RBP18.9■□□□□ 0.62
AP001001.2-201ENST00000524966 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.62
AP001001.2-201ENST00000524966 EIF4G3O43432 1585 aaKnown RBP18.87■□□□□ 0.61
AP001001.2-201ENST00000524966 OSCARQ8IYS5 282 aa18.85■□□□□ 0.61
AP001001.2-201ENST00000524966 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
AP001001.2-201ENST00000524966 SYNJ1O43426 1573 aa18.83■□□□□ 0.6
AP001001.2-201ENST00000524966 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
AP001001.2-201ENST00000524966 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
AP001001.2-201ENST00000524966 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
AP001001.2-201ENST00000524966 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
AP001001.2-201ENST00000524966 GAPVD1Q14C86 1478 aa18.74■□□□□ 0.59
AP001001.2-201ENST00000524966 FBLN2P98095 1184 aa18.71■□□□□ 0.59
AP001001.2-201ENST00000524966 SNAPC4Q5SXM2 1469 aa18.7■□□□□ 0.58
AP001001.2-201ENST00000524966 ABCA5Q8WWZ7 1642 aa18.69■□□□□ 0.58
AP001001.2-201ENST00000524966 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
AP001001.2-201ENST00000524966 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
AP001001.2-201ENST00000524966 CHD1O14646 1710 aa18.65■□□□□ 0.58
AP001001.2-201ENST00000524966 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
AP001001.2-201ENST00000524966 SYNJ2O15056 1496 aa18.62■□□□□ 0.57
AP001001.2-201ENST00000524966 MSH5O43196 834 aa18.58■□□□□ 0.56
AP001001.2-201ENST00000524966 ERICH3Q5RHP9 1530 aa18.55■□□□□ 0.56
AP001001.2-201ENST00000524966 FHAD1B1AJZ9 1412 aa18.52■□□□□ 0.56
AP001001.2-201ENST00000524966 IGF1RP08069 1367 aa18.52■□□□□ 0.55
AP001001.2-201ENST00000524966 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
AP001001.2-201ENST00000524966 ADAMTS12P58397 1594 aa18.5■□□□□ 0.55
AP001001.2-201ENST00000524966 GRIN2AQ12879 1464 aa18.49■□□□□ 0.55
AP001001.2-201ENST00000524966 ARHGEF11O15085 1522 aa18.48■□□□□ 0.55
AP001001.2-201ENST00000524966 CLASP1Q7Z460 1538 aa18.48■□□□□ 0.55
AP001001.2-201ENST00000524966 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
AP001001.2-201ENST00000524966 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
AP001001.2-201ENST00000524966 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
AP001001.2-201ENST00000524966 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
AP001001.2-201ENST00000524966 NUP160Q12769 1436 aa18.43■□□□□ 0.54
AP001001.2-201ENST00000524966 CEP170Q5SW79 1584 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms