RNA–Protein interactions for RNA: ENST00000524897.5

SCYL1-204, Transcript of SCY1 like pseudokinase 1, humanhuman

TSL 2

Gene SCYL1, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-204ENST00000524897 NISCHQ9Y2I1 1504 aa42.75■■■■■ 4.43
SCYL1-204ENST00000524897 ABCC9O60706 1549 aa38.81■■■■□ 3.8
SCYL1-204ENST00000524897 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
SCYL1-204ENST00000524897 DNAJC5BQ9UF47 199 aa36.93■■■■□ 3.5
SCYL1-204ENST00000524897 RB1CC1Q8TDY2 1594 aa36.61■■■■□ 3.45
SCYL1-204ENST00000524897 NACADO15069 1562 aa36.25■■■■□ 3.39
SCYL1-204ENST00000524897 DCAF8L2P0C7V8 631 aa36.21■■■■□ 3.39
SCYL1-204ENST00000524897 PABPN1Q86U42 306 aaKnown RBP eCLIP36.15■■■■□ 3.38
SCYL1-204ENST00000524897 UNC13AQ9UPW8 1703 aa35.78■■■■□ 3.32
SCYL1-204ENST00000524897 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
SCYL1-204ENST00000524897 BICRAQ9NZM4 1560 aa35.6■■■■□ 3.29
SCYL1-204ENST00000524897 ZCCHC6Q5VYS8 1495 aaKnown RBP35.51■■■■□ 3.28
SCYL1-204ENST00000524897 DCAF1Q9Y4B6 1507 aa35.32■■■■□ 3.24
SCYL1-204ENST00000524897 CECR2Q9BXF3 1484 aa34.97■■■■□ 3.19
SCYL1-204ENST00000524897 CC2D2AQ9P2K1 1620 aa34.97■■■■□ 3.19
SCYL1-204ENST00000524897 SHROOM4Q9ULL8 1493 aa34.96■■■■□ 3.19
SCYL1-204ENST00000524897 SCRIBQ14160 1630 aa34.91■■■■□ 3.18
SCYL1-204ENST00000524897 EIF4G1Q04637 1599 aaKnown RBP34.76■■■■□ 3.16
SCYL1-204ENST00000524897 DNAJC5Q9H3Z4 198 aa34.2■■■■□ 3.07
SCYL1-204ENST00000524897 CUX2O14529 1486 aa33.55■■■□□ 2.96
SCYL1-204ENST00000524897 NCAPD3P42695 1498 aa33.51■■■□□ 2.96
SCYL1-204ENST00000524897 ERCC6Q03468 1493 aa33.5■■■□□ 2.95
SCYL1-204ENST00000524897 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
SCYL1-204ENST00000524897 SMARCA4P51532 1647 aa33.34■■■□□ 2.93
SCYL1-204ENST00000524897 NESP48681 1621 aa33.2■■■□□ 2.91
SCYL1-204ENST00000524897 SMARCA2P51531 1590 aa33.18■■■□□ 2.9
SCYL1-204ENST00000524897 HMGXB3Q12766 1538 aa33.15■■■□□ 2.9
SCYL1-204ENST00000524897 BAZ1AQ9NRL2 1556 aaPredicted RBP33.11■■■□□ 2.89
SCYL1-204ENST00000524897 PEG3Q9GZU2 1588 aa33.03■■■□□ 2.88
SCYL1-204ENST00000524897 BAZ1BQ9UIG0 1483 aaKnown RBP32.99■■■□□ 2.87
SCYL1-204ENST00000524897 MROH2BQ7Z745 1585 aa32.99■■■□□ 2.87
SCYL1-204ENST00000524897 THOC2Q8NI27 1593 aaKnown RBP32.85■■■□□ 2.85
SCYL1-204ENST00000524897 LAMC3Q9Y6N6 1575 aa32.79■■■□□ 2.84
SCYL1-204ENST00000524897 KIF21AQ7Z4S6 1674 aa32.67■■■□□ 2.82
SCYL1-204ENST00000524897 PDS5BQ9NTI5 1447 aa32.67■■■□□ 2.82
SCYL1-204ENST00000524897 WIZO95785 1651 aa32.62■■■□□ 2.81
SCYL1-204ENST00000524897 TRIM41Q8WV44 630 aa32.57■■■□□ 2.8
SCYL1-204ENST00000524897 CADPSQ9ULU8 1353 aa32.51■■■□□ 2.79
SCYL1-204ENST00000524897 MRC2Q9UBG0 1479 aa32.4■■■□□ 2.78
SCYL1-204ENST00000524897 RSF1Q96T23 1441 aaPredicted RBP32.33■■■□□ 2.77
SCYL1-204ENST00000524897 WDR62O43379 1518 aa32.31■■■□□ 2.76
SCYL1-204ENST00000524897 CEP164Q9UPV0 1460 aa32.18■■■□□ 2.74
SCYL1-204ENST00000524897 TOP2AP11388 1531 aaKnown RBP32.16■■■□□ 2.74
SCYL1-204ENST00000524897 FANCD2Q9BXW9 1451 aa32.13■■■□□ 2.73
SCYL1-204ENST00000524897 OSCARQ8IYS5 282 aa32.06■■■□□ 2.72
SCYL1-204ENST00000524897 CFTRP13569 1480 aa32■■■□□ 2.71
SCYL1-204ENST00000524897 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
SCYL1-204ENST00000524897 PRDM2Q13029 1718 aa31.83■■■□□ 2.69
SCYL1-204ENST00000524897 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
SCYL1-204ENST00000524897 ZNF608Q9ULD9 1512 aaPredicted RBP31.61■■■□□ 2.65
SCYL1-204ENST00000524897 RIMBP3CA6NJZ7 1639 aa31.6■■■□□ 2.65
SCYL1-204ENST00000524897 RIMBP3BA6NNM3 1639 aa31.6■■■□□ 2.65
SCYL1-204ENST00000524897 RIMBP3Q9UFD9 1639 aa31.6■■■□□ 2.65
SCYL1-204ENST00000524897 IFT140Q96RY7 1462 aa31.56■■■□□ 2.64
SCYL1-204ENST00000524897 ARHGEF11O15085 1522 aa31.46■■■□□ 2.63
SCYL1-204ENST00000524897 TOPBP1Q92547 1522 aa31.46■■■□□ 2.63
SCYL1-204ENST00000524897 CYB5RLQ6IPT4 315 aa31.39■■■□□ 2.62
SCYL1-204ENST00000524897 EIF4G3O43432 1585 aaKnown RBP31.32■■■□□ 2.6
SCYL1-204ENST00000524897 ABCC8Q09428 1581 aa31.31■■■□□ 2.6
SCYL1-204ENST00000524897 DNMBPQ6XZF7 1577 aa31.3■■■□□ 2.6
SCYL1-204ENST00000524897 AQRO60306 1485 aaKnown RBP eCLIP31.29■■■□□ 2.62e-7■■■■■ 33.6
SCYL1-204ENST00000524897 FBLN2P98095 1184 aa31.24■■■□□ 2.59
SCYL1-204ENST00000524897 TRHP20396 242 aaPredicted RBP31.2■■■□□ 2.59
SCYL1-204ENST00000524897 CHD1O14646 1710 aa31.19■■■□□ 2.58
SCYL1-204ENST00000524897 TARBP1Q13395 1621 aaKnown RBP31.18■■■□□ 2.58
SCYL1-204ENST00000524897 ARAP1Q96P48 1450 aa31.14■■■□□ 2.57
SCYL1-204ENST00000524897 POLA1P09884 1462 aaPredicted RBP31.11■■■□□ 2.57
SCYL1-204ENST00000524897 RAD54L2Q9Y4B4 1467 aa31.07■■■□□ 2.56
SCYL1-204ENST00000524897 TDRD9Q8NDG6 1382 aaKnown RBP31.05■■■□□ 2.56
SCYL1-204ENST00000524897 SOGA1O94964 1423 aa31■■■□□ 2.55
SCYL1-204ENST00000524897 CUX1P39880 1505 aa30.98■■■□□ 2.55
SCYL1-204ENST00000524897 FGD5Q6ZNL6 1462 aa30.91■■■□□ 2.54
SCYL1-204ENST00000524897 SNAPC4Q5SXM2 1469 aa30.9■■■□□ 2.54
SCYL1-204ENST00000524897 CHMP7Q8WUX9 453 aaPredicted RBP30.89■■■□□ 2.54
SCYL1-204ENST00000524897 SUPT5HO00267 1087 aaKnown RBP30.87■■■□□ 2.53
SCYL1-204ENST00000524897 WDR97A6NE52 1622 aa30.83■■■□□ 2.53
SCYL1-204ENST00000524897 CLASP1Q7Z460 1538 aa30.82■■■□□ 2.52
SCYL1-204ENST00000524897 MAGI1Q96QZ7 1491 aaPredicted RBP30.76■■■□□ 2.51
SCYL1-204ENST00000524897 SYNJ1O43426 1573 aa30.75■■■□□ 2.51
SCYL1-204ENST00000524897 GRIN2BQ13224 1484 aa30.74■■■□□ 2.51
SCYL1-204ENST00000524897 SYNJ2O15056 1496 aa30.68■■■□□ 2.5
SCYL1-204ENST00000524897 AEBP2Q6ZN18 517 aaPredicted RBP30.63■■■□□ 2.49
SCYL1-204ENST00000524897 PBRM1Q86U86 1689 aa30.62■■■□□ 2.49
SCYL1-204ENST00000524897 ABCA5Q8WWZ7 1642 aa30.59■■■□□ 2.49
SCYL1-204ENST00000524897 GAPVD1Q14C86 1478 aa30.58■■■□□ 2.49
SCYL1-204ENST00000524897 ABCA10Q8WWZ4 1543 aa30.57■■■□□ 2.49
SCYL1-204ENST00000524897 BIVM-ERCC5R4GMW8 1640 aa30.55■■■□□ 2.48
SCYL1-204ENST00000524897 TOP2BQ02880 1626 aa30.51■■■□□ 2.47
SCYL1-204ENST00000524897 WRNQ14191 1432 aaPredicted RBP eCLIP30.41■■■□□ 2.46
SCYL1-204ENST00000524897 ERCC6L2Q5T890 1561 aa30.38■■■□□ 2.45
SCYL1-204ENST00000524897 GRIN2AQ12879 1464 aa30.34■■■□□ 2.45
SCYL1-204ENST00000524897 ADAMTS12P58397 1594 aa30.32■■■□□ 2.44
SCYL1-204ENST00000524897 CEP170Q5SW79 1584 aa30.25■■■□□ 2.43
SCYL1-204ENST00000524897 NUP160Q12769 1436 aa30.25■■■□□ 2.43
SCYL1-204ENST00000524897 FHAD1B1AJZ9 1412 aa30.17■■■□□ 2.42
SCYL1-204ENST00000524897 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
SCYL1-204ENST00000524897 SHROOM2Q13796 1616 aa30.12■■■□□ 2.41
SCYL1-204ENST00000524897 PRG4Q92954 1404 aaPredicted RBP30.05■■■□□ 2.4
SCYL1-204ENST00000524897 JPH4Q96JJ6 628 aa30.05■■■□□ 2.4
SCYL1-204ENST00000524897 KIF13AQ9H1H9 1805 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms