RNA–Protein interactions for RNA: ENST00000524816.7

TRIM29-204, Transcript of tripartite motif containing 29, humanhuman

TSL 5

Gene TRIM29, Length 1,632 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-204ENST00000524816 NISCHQ9Y2I1 1504 aa37.11■■■■□ 3.53
TRIM29-204ENST00000524816 CCDC180Q9P1Z9 1646 aa32.66■■■□□ 2.82
TRIM29-204ENST00000524816 ABCC9O60706 1549 aa31.36■■■□□ 2.61
TRIM29-204ENST00000524816 ZCCHC6Q5VYS8 1495 aaKnown RBP31.06■■■□□ 2.56
TRIM29-204ENST00000524816 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
TRIM29-204ENST00000524816 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
TRIM29-204ENST00000524816 MYO15BQ96JP2 1530 aa30.62■■■□□ 2.49
TRIM29-204ENST00000524816 NACADO15069 1562 aa30.59■■■□□ 2.49
TRIM29-204ENST00000524816 RB1CC1Q8TDY2 1594 aa30.46■■■□□ 2.47
TRIM29-204ENST00000524816 SCRIBQ14160 1630 aa29.89■■■□□ 2.38
TRIM29-204ENST00000524816 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
TRIM29-204ENST00000524816 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
TRIM29-204ENST00000524816 BICRAQ9NZM4 1560 aa29.45■■■□□ 2.31
TRIM29-204ENST00000524816 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.3
TRIM29-204ENST00000524816 CECR2Q9BXF3 1484 aa28.82■■■□□ 2.2
TRIM29-204ENST00000524816 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
TRIM29-204ENST00000524816 EIF4G1Q04637 1599 aaKnown RBP28.67■■■□□ 2.18
TRIM29-204ENST00000524816 SMARCA4P51532 1647 aa28.64■■■□□ 2.18
TRIM29-204ENST00000524816 MROH2BQ7Z745 1585 aa28.6■■■□□ 2.17
TRIM29-204ENST00000524816 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
TRIM29-204ENST00000524816 SUPT5HO00267 1087 aaKnown RBP28.39■■■□□ 2.13
TRIM29-204ENST00000524816 CC2D2AQ9P2K1 1620 aa28.37■■■□□ 2.13
TRIM29-204ENST00000524816 SMARCA2P51531 1590 aa28.35■■■□□ 2.13
TRIM29-204ENST00000524816 PEG3Q9GZU2 1588 aa28.35■■■□□ 2.13
TRIM29-204ENST00000524816 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
TRIM29-204ENST00000524816 WIZO95785 1651 aa28.3■■■□□ 2.12
TRIM29-204ENST00000524816 NCAPD3P42695 1498 aa28.22■■■□□ 2.11
TRIM29-204ENST00000524816 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
TRIM29-204ENST00000524816 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.09
TRIM29-204ENST00000524816 HMGXB3Q12766 1538 aa28.14■■■□□ 2.09
TRIM29-204ENST00000524816 TOP2AP11388 1531 aaKnown RBP28.08■■■□□ 2.09
TRIM29-204ENST00000524816 CCDC88BA6NC98 1476 aa27.75■■■□□ 2.03
TRIM29-204ENST00000524816 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
TRIM29-204ENST00000524816 CFTRP13569 1480 aa27.41■■□□□ 1.98
TRIM29-204ENST00000524816 LAMC3Q9Y6N6 1575 aa27.36■■□□□ 1.97
TRIM29-204ENST00000524816 NESP48681 1621 aa27.31■■□□□ 1.96
TRIM29-204ENST00000524816 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
TRIM29-204ENST00000524816 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
TRIM29-204ENST00000524816 FANCD2Q9BXW9 1451 aa27.14■■□□□ 1.93
TRIM29-204ENST00000524816 CEP164Q9UPV0 1460 aa27.05■■□□□ 1.92
TRIM29-204ENST00000524816 ERCC6Q03468 1493 aa27.03■■□□□ 1.92
TRIM29-204ENST00000524816 KIF21AQ7Z4S6 1674 aa26.98■■□□□ 1.91
TRIM29-204ENST00000524816 ABCC8Q09428 1581 aa26.92■■□□□ 1.9
TRIM29-204ENST00000524816 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
TRIM29-204ENST00000524816 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
TRIM29-204ENST00000524816 MRC2Q9UBG0 1479 aa26.86■■□□□ 1.89
TRIM29-204ENST00000524816 TRIM41Q8WV44 630 aa26.8■■□□□ 1.88
TRIM29-204ENST00000524816 CUX1P39880 1505 aa26.79■■□□□ 1.88
TRIM29-204ENST00000524816 DNMBPQ6XZF7 1577 aa26.78■■□□□ 1.88
TRIM29-204ENST00000524816 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
TRIM29-204ENST00000524816 SYNJ1O43426 1573 aa26.76■■□□□ 1.87
TRIM29-204ENST00000524816 TOPBP1Q92547 1522 aa26.76■■□□□ 1.87
TRIM29-204ENST00000524816 TOP2BQ02880 1626 aa26.74■■□□□ 1.87
TRIM29-204ENST00000524816 THOC2Q8NI27 1593 aaKnown RBP26.73■■□□□ 1.87
TRIM29-204ENST00000524816 WDR62O43379 1518 aa26.72■■□□□ 1.87
TRIM29-204ENST00000524816 BIVM-ERCC5R4GMW8 1640 aa26.71■■□□□ 1.87
TRIM29-204ENST00000524816 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
TRIM29-204ENST00000524816 POLA1P09884 1462 aaPredicted RBP26.58■■□□□ 1.85
TRIM29-204ENST00000524816 SOGA1O94964 1423 aa26.52■■□□□ 1.84
TRIM29-204ENST00000524816 CUX2O14529 1486 aa26.46■■□□□ 1.83
TRIM29-204ENST00000524816 RAD54L2Q9Y4B4 1467 aa26.46■■□□□ 1.83
TRIM29-204ENST00000524816 IFT140Q96RY7 1462 aa26.45■■□□□ 1.82
TRIM29-204ENST00000524816 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
TRIM29-204ENST00000524816 TARBP1Q13395 1621 aaKnown RBP26.37■■□□□ 1.81
TRIM29-204ENST00000524816 KIF27Q86VH2 1401 aa26.33■■□□□ 1.8
TRIM29-204ENST00000524816 WDR97A6NE52 1622 aa26.29■■□□□ 1.8
TRIM29-204ENST00000524816 TDRD9Q8NDG6 1382 aaKnown RBP26.28■■□□□ 1.8
TRIM29-204ENST00000524816 EEA1Q15075 1411 aa26.28■■□□□ 1.8
TRIM29-204ENST00000524816 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
TRIM29-204ENST00000524816 FAM9AQ8IZU1 332 aaPredicted RBP26.21■■□□□ 1.79
TRIM29-204ENST00000524816 GAPVD1Q14C86 1478 aa26.21■■□□□ 1.79
TRIM29-204ENST00000524816 RUSC2Q8N2Y8 1516 aa26.21■■□□□ 1.79
TRIM29-204ENST00000524816 AQRO60306 1485 aaKnown RBP eCLIP26.2■■□□□ 1.78
TRIM29-204ENST00000524816 ABCA5Q8WWZ7 1642 aa26.19■■□□□ 1.78
TRIM29-204ENST00000524816 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
TRIM29-204ENST00000524816 CSRNP3Q8WYN3 585 aa26.14■■□□□ 1.78
TRIM29-204ENST00000524816 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
TRIM29-204ENST00000524816 IGF1RP08069 1367 aa26.1■■□□□ 1.77
TRIM29-204ENST00000524816 ERICH3Q5RHP9 1530 aa26.1■■□□□ 1.77
TRIM29-204ENST00000524816 PBRM1Q86U86 1689 aa26.05■■□□□ 1.76
TRIM29-204ENST00000524816 CARMIL1Q5VZK9 1371 aa25.99■■□□□ 1.75
TRIM29-204ENST00000524816 CUL7Q14999 1698 aa25.98■■□□□ 1.75
TRIM29-204ENST00000524816 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
TRIM29-204ENST00000524816 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
TRIM29-204ENST00000524816 PRXQ9BXM0 1461 aa25.95■■□□□ 1.74
TRIM29-204ENST00000524816 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
TRIM29-204ENST00000524816 ADAMTS12P58397 1594 aa25.91■■□□□ 1.74
TRIM29-204ENST00000524816 RAPGEF2Q9Y4G8 1499 aa25.89■■□□□ 1.74
TRIM29-204ENST00000524816 KIF21BO75037 1637 aa25.89■■□□□ 1.74
TRIM29-204ENST00000524816 SYNJ2O15056 1496 aa25.87■■□□□ 1.73
TRIM29-204ENST00000524816 CHMP7Q8WUX9 453 aaPredicted RBP25.86■■□□□ 1.73
TRIM29-204ENST00000524816 GOLGA3Q08378 1498 aa25.84■■□□□ 1.73
TRIM29-204ENST00000524816 FBLN2P98095 1184 aa25.82■■□□□ 1.72
TRIM29-204ENST00000524816 EHMT2Q96KQ7 1210 aa25.82■■□□□ 1.72
TRIM29-204ENST00000524816 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
TRIM29-204ENST00000524816 LOC105371045A0A1W2PR82 267 aa25.76■■□□□ 1.71
TRIM29-204ENST00000524816 UBTFP17480 764 aaKnown RBP25.76■■□□□ 1.71
TRIM29-204ENST00000524816 CHD1O14646 1710 aa25.66■■□□□ 1.7
TRIM29-204ENST00000524816 TNIKQ9UKE5 1360 aa25.64■■□□□ 1.69
TRIM29-204ENST00000524816 NUP160Q12769 1436 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms