RNA–Protein interactions for RNA: ENST00000524798.1

LTBP3-203, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-203ENST00000524798 NISCHQ9Y2I1 1504 aa48.79■■■■■ 5.4
LTBP3-203ENST00000524798 CCDC180Q9P1Z9 1646 aa43.66■■■■■ 4.58
LTBP3-203ENST00000524798 ABCC9O60706 1549 aa43.41■■■■■ 4.54
LTBP3-203ENST00000524798 RB1CC1Q8TDY2 1594 aa41.45■■■■■ 4.23
LTBP3-203ENST00000524798 NACADO15069 1562 aa41.26■■■■■ 4.2
LTBP3-203ENST00000524798 DCAF8L2P0C7V8 631 aa41.01■■■■■ 4.16
LTBP3-203ENST00000524798 MYO15BQ96JP2 1530 aa40.83■■■■■ 4.13
LTBP3-203ENST00000524798 DNAJC5BQ9UF47 199 aa40.59■■■■■ 4.09
LTBP3-203ENST00000524798 ZCCHC6Q5VYS8 1495 aaKnown RBP40.48■■■■■ 4.07
LTBP3-203ENST00000524798 PABPN1Q86U42 306 aaKnown RBP eCLIP40.47■■■■■ 4.07
LTBP3-203ENST00000524798 UNC13AQ9UPW8 1703 aa40.45■■■■■ 4.07
LTBP3-203ENST00000524798 DCAF1Q9Y4B6 1507 aa40.37■■■■■ 4.05
LTBP3-203ENST00000524798 BICRAQ9NZM4 1560 aa40.25■■■■■ 4.03
LTBP3-203ENST00000524798 SHROOM4Q9ULL8 1493 aa39.79■■■■□ 3.96
LTBP3-203ENST00000524798 SCRIBQ14160 1630 aa39.73■■■■□ 3.95
LTBP3-203ENST00000524798 CC2D2AQ9P2K1 1620 aa39.24■■■■□ 3.87
LTBP3-203ENST00000524798 EIF4G1Q04637 1599 aaKnown RBP39.22■■■■□ 3.87
LTBP3-203ENST00000524798 CECR2Q9BXF3 1484 aa39.11■■■■□ 3.85
LTBP3-203ENST00000524798 NCAPD3P42695 1498 aa38.12■■■■□ 3.69
LTBP3-203ENST00000524798 ATAD2BQ9ULI0 1458 aa38.01■■■■□ 3.67
LTBP3-203ENST00000524798 SMARCA4P51532 1647 aa37.98■■■■□ 3.67
LTBP3-203ENST00000524798 SMARCA2P51531 1590 aa37.89■■■■□ 3.66
LTBP3-203ENST00000524798 BAZ1AQ9NRL2 1556 aaPredicted RBP37.85■■■■□ 3.65
LTBP3-203ENST00000524798 HMGXB3Q12766 1538 aa37.82■■■■□ 3.64
LTBP3-203ENST00000524798 PEG3Q9GZU2 1588 aa37.67■■■■□ 3.62
LTBP3-203ENST00000524798 BAZ1BQ9UIG0 1483 aaKnown RBP37.6■■■■□ 3.61
LTBP3-203ENST00000524798 MROH2BQ7Z745 1585 aa37.58■■■■□ 3.61
LTBP3-203ENST00000524798 ERCC6Q03468 1493 aa37.45■■■■□ 3.59
LTBP3-203ENST00000524798 CUX2O14529 1486 aa37.38■■■■□ 3.57
LTBP3-203ENST00000524798 NESP48681 1621 aa37.36■■■■□ 3.57
LTBP3-203ENST00000524798 LAMC3Q9Y6N6 1575 aa37.17■■■■□ 3.54
LTBP3-203ENST00000524798 DNAJC5Q9H3Z4 198 aa37.14■■■■□ 3.54
LTBP3-203ENST00000524798 WIZO95785 1651 aa37.09■■■■□ 3.53
LTBP3-203ENST00000524798 PDS5BQ9NTI5 1447 aa36.97■■■■□ 3.51
LTBP3-203ENST00000524798 CADPSQ9ULU8 1353 aa36.95■■■■□ 3.51
LTBP3-203ENST00000524798 THOC2Q8NI27 1593 aaKnown RBP36.94■■■■□ 3.5
LTBP3-203ENST00000524798 RSF1Q96T23 1441 aaPredicted RBP36.92■■■■□ 3.5
LTBP3-203ENST00000524798 KIF21AQ7Z4S6 1674 aa36.84■■■■□ 3.49
LTBP3-203ENST00000524798 TOP2AP11388 1531 aaKnown RBP36.68■■■■□ 3.46
LTBP3-203ENST00000524798 MRC2Q9UBG0 1479 aa36.61■■■■□ 3.45
LTBP3-203ENST00000524798 CFTRP13569 1480 aa36.58■■■■□ 3.45
LTBP3-203ENST00000524798 WDR62O43379 1518 aa36.52■■■■□ 3.44
LTBP3-203ENST00000524798 FANCD2Q9BXW9 1451 aa36.5■■■■□ 3.43
LTBP3-203ENST00000524798 CEP164Q9UPV0 1460 aa36.5■■■■□ 3.43
LTBP3-203ENST00000524798 CCDC88BA6NC98 1476 aa36.29■■■■□ 3.4
LTBP3-203ENST00000524798 URB2Q14146 1524 aaKnown RBP36.18■■■■□ 3.38
LTBP3-203ENST00000524798 PRDM2Q13029 1718 aa36.14■■■■□ 3.38
LTBP3-203ENST00000524798 TOPBP1Q92547 1522 aa35.83■■■■□ 3.33
LTBP3-203ENST00000524798 ABCC8Q09428 1581 aa35.81■■■■□ 3.32
LTBP3-203ENST00000524798 IFT140Q96RY7 1462 aa35.8■■■■□ 3.32
LTBP3-203ENST00000524798 OSCARQ8IYS5 282 aa35.73■■■■□ 3.31
LTBP3-203ENST00000524798 DNMBPQ6XZF7 1577 aa35.71■■■■□ 3.31
LTBP3-203ENST00000524798 ZNF608Q9ULD9 1512 aaPredicted RBP35.68■■■■□ 3.3
LTBP3-203ENST00000524798 TARBP1Q13395 1621 aaKnown RBP35.5■■■■□ 3.27
LTBP3-203ENST00000524798 POLA1P09884 1462 aaPredicted RBP35.48■■■■□ 3.27
LTBP3-203ENST00000524798 TRIM41Q8WV44 630 aa35.48■■■■□ 3.27
LTBP3-203ENST00000524798 EIF4G3O43432 1585 aaKnown RBP35.46■■■■□ 3.27
LTBP3-203ENST00000524798 AQRO60306 1485 aaKnown RBP eCLIP35.4■■■■□ 3.266e-8■■■■■ 31.2
LTBP3-203ENST00000524798 SUPT5HO00267 1087 aaKnown RBP35.38■■■■□ 3.25
LTBP3-203ENST00000524798 SOGA1O94964 1423 aa35.33■■■■□ 3.25
LTBP3-203ENST00000524798 RAD54L2Q9Y4B4 1467 aa35.33■■■■□ 3.25
LTBP3-203ENST00000524798 CUX1P39880 1505 aa35.29■■■■□ 3.24
LTBP3-203ENST00000524798 FGD5Q6ZNL6 1462 aa35.28■■■■□ 3.24
LTBP3-203ENST00000524798 TDRD9Q8NDG6 1382 aaKnown RBP35.22■■■■□ 3.23
LTBP3-203ENST00000524798 WDR97A6NE52 1622 aa35.17■■■■□ 3.22
LTBP3-203ENST00000524798 RIMBP3CA6NJZ7 1639 aa35.16■■■■□ 3.22
LTBP3-203ENST00000524798 RIMBP3BA6NNM3 1639 aa35.16■■■■□ 3.22
LTBP3-203ENST00000524798 RIMBP3Q9UFD9 1639 aa35.16■■■■□ 3.22
LTBP3-203ENST00000524798 CHD1O14646 1710 aa35.13■■■■□ 3.21
LTBP3-203ENST00000524798 ARHGEF11O15085 1522 aa35.1■■■■□ 3.21
LTBP3-203ENST00000524798 FBLN2P98095 1184 aa35.08■■■■□ 3.21
LTBP3-203ENST00000524798 SNAPC4Q5SXM2 1469 aa35.02■■■■□ 3.2
LTBP3-203ENST00000524798 GRIN2BQ13224 1484 aa35■■■■□ 3.19
LTBP3-203ENST00000524798 MAGI1Q96QZ7 1491 aaPredicted RBP34.98■■■■□ 3.19
LTBP3-203ENST00000524798 ABCA10Q8WWZ4 1543 aa34.93■■■■□ 3.18
LTBP3-203ENST00000524798 CHMP7Q8WUX9 453 aaPredicted RBP34.91■■■■□ 3.18
LTBP3-203ENST00000524798 GAPVD1Q14C86 1478 aa34.9■■■■□ 3.18
LTBP3-203ENST00000524798 SYNJ2O15056 1496 aa34.86■■■■□ 3.17
LTBP3-203ENST00000524798 CYB5RLQ6IPT4 315 aa34.84■■■■□ 3.17
LTBP3-203ENST00000524798 WRNQ14191 1432 aaPredicted RBP eCLIP34.82■■■■□ 3.17
LTBP3-203ENST00000524798 ABCA5Q8WWZ7 1642 aa34.81■■■■□ 3.16
LTBP3-203ENST00000524798 CLASP1Q7Z460 1538 aa34.81■■■■□ 3.16
LTBP3-203ENST00000524798 PBRM1Q86U86 1689 aa34.79■■■■□ 3.16
LTBP3-203ENST00000524798 SYNJ1O43426 1573 aa34.79■■■■□ 3.16
LTBP3-203ENST00000524798 TOP2BQ02880 1626 aa34.78■■■■□ 3.16
LTBP3-203ENST00000524798 ARAP1Q96P48 1450 aa34.78■■■■□ 3.16
LTBP3-203ENST00000524798 BIVM-ERCC5R4GMW8 1640 aa34.77■■■■□ 3.16
LTBP3-203ENST00000524798 GRIN2AQ12879 1464 aa34.54■■■■□ 3.12
LTBP3-203ENST00000524798 ADAMTS12P58397 1594 aa34.52■■■■□ 3.12
LTBP3-203ENST00000524798 ERICH3Q5RHP9 1530 aa34.49■■■■□ 3.11
LTBP3-203ENST00000524798 FHAD1B1AJZ9 1412 aa34.48■■■■□ 3.11
LTBP3-203ENST00000524798 NUP160Q12769 1436 aa34.46■■■■□ 3.11
LTBP3-203ENST00000524798 CEP170Q5SW79 1584 aa34.38■■■■□ 3.09
LTBP3-203ENST00000524798 TRHP20396 242 aaPredicted RBP34.33■■■■□ 3.09
LTBP3-203ENST00000524798 ERCC6L2Q5T890 1561 aa34.24■■■■□ 3.07
LTBP3-203ENST00000524798 SHROOM2Q13796 1616 aa34.24■■■■□ 3.07
LTBP3-203ENST00000524798 KIF27Q86VH2 1401 aa34.13■■■■□ 3.05
LTBP3-203ENST00000524798 IGF1RP08069 1367 aa34.13■■■■□ 3.05
LTBP3-203ENST00000524798 JPH4Q96JJ6 628 aa34.11■■■■□ 3.05
LTBP3-203ENST00000524798 PRG4Q92954 1404 aaPredicted RBP34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms