RNA–Protein interactions for RNA: ENST00000524683.5

SC5D-203, Transcript of sterol-C5-desaturase, humanhuman

TSL 2

Gene SC5D, Length 2,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-203ENST00000524683 NISCHQ9Y2I1 1504 aa22.58■■□□□ 1.21
SC5D-203ENST00000524683 CCDC180Q9P1Z9 1646 aa20.79■□□□□ 0.92
SC5D-203ENST00000524683 ABCC9O60706 1549 aa20.62■□□□□ 0.89
SC5D-203ENST00000524683 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.77
SC5D-203ENST00000524683 NACADO15069 1562 aa19.65■□□□□ 0.74
SC5D-203ENST00000524683 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.73
SC5D-203ENST00000524683 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
SC5D-203ENST00000524683 UNC13AQ9UPW8 1703 aa19.32■□□□□ 0.68
SC5D-203ENST00000524683 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
SC5D-203ENST00000524683 BICRAQ9NZM4 1560 aa19.16■□□□□ 0.66
SC5D-203ENST00000524683 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
SC5D-203ENST00000524683 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
SC5D-203ENST00000524683 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
SC5D-203ENST00000524683 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.6
SC5D-203ENST00000524683 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
SC5D-203ENST00000524683 ZCCHC6Q5VYS8 1495 aaKnown RBP18.67■□□□□ 0.58
SC5D-203ENST00000524683 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
SC5D-203ENST00000524683 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
SC5D-203ENST00000524683 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
SC5D-203ENST00000524683 CUX2O14529 1486 aa18.38■□□□□ 0.53
SC5D-203ENST00000524683 NCAPD3P42695 1498 aa18.04■□□□□ 0.48
SC5D-203ENST00000524683 HMGXB3Q12766 1538 aa17.98■□□□□ 0.47
SC5D-203ENST00000524683 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
SC5D-203ENST00000524683 SMARCA2P51531 1590 aa17.89■□□□□ 0.45
SC5D-203ENST00000524683 THOC2Q8NI27 1593 aaKnown RBP17.82■□□□□ 0.44
SC5D-203ENST00000524683 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
SC5D-203ENST00000524683 LAMC3Q9Y6N6 1575 aa17.78■□□□□ 0.44
SC5D-203ENST00000524683 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
SC5D-203ENST00000524683 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
SC5D-203ENST00000524683 BAZ1AQ9NRL2 1556 aaPredicted RBP17.64■□□□□ 0.41
SC5D-203ENST00000524683 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
SC5D-203ENST00000524683 NESP48681 1621 aa17.56■□□□□ 0.4
SC5D-203ENST00000524683 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
SC5D-203ENST00000524683 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
SC5D-203ENST00000524683 WDR62O43379 1518 aa17.5■□□□□ 0.39
SC5D-203ENST00000524683 MRC2Q9UBG0 1479 aa17.45■□□□□ 0.38
SC5D-203ENST00000524683 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
SC5D-203ENST00000524683 MROH2BQ7Z745 1585 aa17.24■□□□□ 0.35
SC5D-203ENST00000524683 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
SC5D-203ENST00000524683 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
SC5D-203ENST00000524683 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
SC5D-203ENST00000524683 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
SC5D-203ENST00000524683 CFTRP13569 1480 aa17.12■□□□□ 0.33
SC5D-203ENST00000524683 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
SC5D-203ENST00000524683 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
SC5D-203ENST00000524683 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
SC5D-203ENST00000524683 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
SC5D-203ENST00000524683 WIZO95785 1651 aa17.01■□□□□ 0.31
SC5D-203ENST00000524683 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
SC5D-203ENST00000524683 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
SC5D-203ENST00000524683 TOP2AP11388 1531 aaKnown RBP16.97■□□□□ 0.31
SC5D-203ENST00000524683 ARHGEF11O15085 1522 aa16.96■□□□□ 0.31
SC5D-203ENST00000524683 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
SC5D-203ENST00000524683 WDR97A6NE52 1622 aa16.9■□□□□ 0.3
SC5D-203ENST00000524683 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
SC5D-203ENST00000524683 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
SC5D-203ENST00000524683 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
SC5D-203ENST00000524683 CHD1O14646 1710 aa16.78■□□□□ 0.28
SC5D-203ENST00000524683 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
SC5D-203ENST00000524683 TARBP1Q13395 1621 aaKnown RBP16.75■□□□□ 0.27
SC5D-203ENST00000524683 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
SC5D-203ENST00000524683 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
SC5D-203ENST00000524683 CLASP1Q7Z460 1538 aa16.69■□□□□ 0.26
SC5D-203ENST00000524683 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
SC5D-203ENST00000524683 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
SC5D-203ENST00000524683 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
SC5D-203ENST00000524683 MAGI1Q96QZ7 1491 aaPredicted RBP16.58■□□□□ 0.24
SC5D-203ENST00000524683 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
SC5D-203ENST00000524683 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
SC5D-203ENST00000524683 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
SC5D-203ENST00000524683 SYNJ2O15056 1496 aa16.46■□□□□ 0.22
SC5D-203ENST00000524683 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
SC5D-203ENST00000524683 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
SC5D-203ENST00000524683 SNAPC4Q5SXM2 1469 aa16.44■□□□□ 0.22
SC5D-203ENST00000524683 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
SC5D-203ENST00000524683 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
SC5D-203ENST00000524683 SOGA1O94964 1423 aa16.4■□□□□ 0.22
SC5D-203ENST00000524683 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
SC5D-203ENST00000524683 FGD5Q6ZNL6 1462 aa16.34■□□□□ 0.21
SC5D-203ENST00000524683 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
SC5D-203ENST00000524683 SHROOM2Q13796 1616 aa16.33■□□□□ 0.2
SC5D-203ENST00000524683 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
SC5D-203ENST00000524683 ABCA10Q8WWZ4 1543 aa16.28■□□□□ 0.2
SC5D-203ENST00000524683 CUX1P39880 1505 aa16.27■□□□□ 0.2
SC5D-203ENST00000524683 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
SC5D-203ENST00000524683 KIF13AQ9H1H9 1805 aa16.25■□□□□ 0.19
SC5D-203ENST00000524683 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
SC5D-203ENST00000524683 NUP160Q12769 1436 aa16.24■□□□□ 0.19
SC5D-203ENST00000524683 FBLN2P98095 1184 aa16.23■□□□□ 0.19
SC5D-203ENST00000524683 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
SC5D-203ENST00000524683 CEP170Q5SW79 1584 aa16.21■□□□□ 0.18
SC5D-203ENST00000524683 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
SC5D-203ENST00000524683 MAPKBP1O60336 1514 aa16.16■□□□□ 0.18
SC5D-203ENST00000524683 ERICH3Q5RHP9 1530 aa16.13■□□□□ 0.17
SC5D-203ENST00000524683 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
SC5D-203ENST00000524683 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
SC5D-203ENST00000524683 ERCC6L2Q5T890 1561 aa16.08■□□□□ 0.17
SC5D-203ENST00000524683 ABCC10Q5T3U5 1492 aa16.08■□□□□ 0.16
SC5D-203ENST00000524683 DIP2BQ9P265 1576 aa16.05■□□□□ 0.16
SC5D-203ENST00000524683 TOP2BQ02880 1626 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms