RNA–Protein interactions for RNA: ENST00000524648.1

CELF1-207, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 2

Gene CELF1, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-207ENST00000524648 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
CELF1-207ENST00000524648 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
CELF1-207ENST00000524648 ABCC9O60706 1549 aa20.44■□□□□ 0.86
CELF1-207ENST00000524648 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
CELF1-207ENST00000524648 NACADO15069 1562 aa19.35■□□□□ 0.69
CELF1-207ENST00000524648 DNAJC5BQ9UF47 199 aa19.28■□□□□ 0.68
CELF1-207ENST00000524648 UNC13AQ9UPW8 1703 aa19.17■□□□□ 0.66
CELF1-207ENST00000524648 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
CELF1-207ENST00000524648 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
CELF1-207ENST00000524648 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
CELF1-207ENST00000524648 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
CELF1-207ENST00000524648 ZCCHC6Q5VYS8 1495 aaKnown RBP18.86■□□□□ 0.61
CELF1-207ENST00000524648 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
CELF1-207ENST00000524648 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
CELF1-207ENST00000524648 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
CELF1-207ENST00000524648 CC2D2AQ9P2K1 1620 aa18.53■□□□□ 0.56
CELF1-207ENST00000524648 EIF4G1Q04637 1599 aaKnown RBP18.49■□□□□ 0.55
CELF1-207ENST00000524648 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
CELF1-207ENST00000524648 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
CELF1-207ENST00000524648 ATAD2BQ9ULI0 1458 aa17.78■□□□□ 0.44
CELF1-207ENST00000524648 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
CELF1-207ENST00000524648 HMGXB3Q12766 1538 aa17.76■□□□□ 0.43
CELF1-207ENST00000524648 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
CELF1-207ENST00000524648 SMARCA2P51531 1590 aa17.72■□□□□ 0.43
CELF1-207ENST00000524648 CUX2O14529 1486 aa17.71■□□□□ 0.43
CELF1-207ENST00000524648 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
CELF1-207ENST00000524648 BAZ1AQ9NRL2 1556 aaPredicted RBP17.64■□□□□ 0.41
CELF1-207ENST00000524648 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
CELF1-207ENST00000524648 NESP48681 1621 aa17.58■□□□□ 0.41
CELF1-207ENST00000524648 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
CELF1-207ENST00000524648 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
CELF1-207ENST00000524648 THOC2Q8NI27 1593 aaKnown RBP17.5■□□□□ 0.39
CELF1-207ENST00000524648 LAMC3Q9Y6N6 1575 aa17.48■□□□□ 0.39
CELF1-207ENST00000524648 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
CELF1-207ENST00000524648 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
CELF1-207ENST00000524648 WIZO95785 1651 aa17.3■□□□□ 0.36
CELF1-207ENST00000524648 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
CELF1-207ENST00000524648 WDR62O43379 1518 aa17.21■□□□□ 0.35
CELF1-207ENST00000524648 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
CELF1-207ENST00000524648 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
CELF1-207ENST00000524648 CFTRP13569 1480 aa17.1■□□□□ 0.33
CELF1-207ENST00000524648 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
CELF1-207ENST00000524648 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
CELF1-207ENST00000524648 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
CELF1-207ENST00000524648 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
CELF1-207ENST00000524648 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
CELF1-207ENST00000524648 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
CELF1-207ENST00000524648 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
CELF1-207ENST00000524648 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
CELF1-207ENST00000524648 TOPBP1Q92547 1522 aa16.76■□□□□ 0.27
CELF1-207ENST00000524648 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
CELF1-207ENST00000524648 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
CELF1-207ENST00000524648 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
CELF1-207ENST00000524648 EIF4G3O43432 1585 aaKnown RBP16.7■□□□□ 0.26
CELF1-207ENST00000524648 RIMBP3CA6NJZ7 1639 aa16.7■□□□□ 0.26
CELF1-207ENST00000524648 RIMBP3BA6NNM3 1639 aa16.7■□□□□ 0.26
CELF1-207ENST00000524648 RIMBP3Q9UFD9 1639 aa16.7■□□□□ 0.26
CELF1-207ENST00000524648 ABCC8Q09428 1581 aa16.69■□□□□ 0.26
CELF1-207ENST00000524648 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
CELF1-207ENST00000524648 ARHGEF11O15085 1522 aa16.61■□□□□ 0.25
CELF1-207ENST00000524648 CHD1O14646 1710 aa16.61■□□□□ 0.25
CELF1-207ENST00000524648 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
CELF1-207ENST00000524648 AQRO60306 1485 aaKnown RBP eCLIP16.55■□□□□ 0.24
CELF1-207ENST00000524648 WDR97A6NE52 1622 aa16.52■□□□□ 0.23
CELF1-207ENST00000524648 RAD54L2Q9Y4B4 1467 aa16.49■□□□□ 0.23
CELF1-207ENST00000524648 CUX1P39880 1505 aa16.46■□□□□ 0.23
CELF1-207ENST00000524648 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
CELF1-207ENST00000524648 ARAP1Q96P48 1450 aa16.46■□□□□ 0.23
CELF1-207ENST00000524648 SOGA1O94964 1423 aa16.45■□□□□ 0.22
CELF1-207ENST00000524648 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
CELF1-207ENST00000524648 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
CELF1-207ENST00000524648 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
CELF1-207ENST00000524648 MAGI1Q96QZ7 1491 aaPredicted RBP16.38■□□□□ 0.21
CELF1-207ENST00000524648 CYB5RLQ6IPT4 315 aa16.36■□□□□ 0.21
CELF1-207ENST00000524648 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
CELF1-207ENST00000524648 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
CELF1-207ENST00000524648 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
CELF1-207ENST00000524648 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
CELF1-207ENST00000524648 FBLN2P98095 1184 aa16.32■□□□□ 0.2
CELF1-207ENST00000524648 ABCA5Q8WWZ7 1642 aa16.32■□□□□ 0.2
CELF1-207ENST00000524648 ABCA10Q8WWZ4 1543 aa16.29■□□□□ 0.2
CELF1-207ENST00000524648 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
CELF1-207ENST00000524648 CHMP7Q8WUX9 453 aaPredicted RBP16.24■□□□□ 0.19
CELF1-207ENST00000524648 BIVM-ERCC5R4GMW8 1640 aa16.22■□□□□ 0.19
CELF1-207ENST00000524648 TOP2BQ02880 1626 aa16.19■□□□□ 0.18
CELF1-207ENST00000524648 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
CELF1-207ENST00000524648 GRIN2AQ12879 1464 aa16.16■□□□□ 0.18
CELF1-207ENST00000524648 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
CELF1-207ENST00000524648 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
CELF1-207ENST00000524648 NUP160Q12769 1436 aa16.14■□□□□ 0.17
CELF1-207ENST00000524648 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
CELF1-207ENST00000524648 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
CELF1-207ENST00000524648 SHROOM2Q13796 1616 aa16.13■□□□□ 0.17
CELF1-207ENST00000524648 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
CELF1-207ENST00000524648 SUPT5HO00267 1087 aaKnown RBP16.08■□□□□ 0.16
CELF1-207ENST00000524648 FHAD1B1AJZ9 1412 aa16.07■□□□□ 0.16
CELF1-207ENST00000524648 RUSC2Q8N2Y8 1516 aa15.97■□□□□ 0.15
CELF1-207ENST00000524648 KIF13AQ9H1H9 1805 aa15.96■□□□□ 0.15
CELF1-207ENST00000524648 PRG4Q92954 1404 aaPredicted RBP15.91■□□□□ 0.14
CELF1-207ENST00000524648 JPH4Q96JJ6 628 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms