RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 NISCHQ9Y2I1 1504 aa48.68■■■■■ 5.38
NDUFS3-202ENST00000524568 CCDC180Q9P1Z9 1646 aa43.56■■■■■ 4.56
NDUFS3-202ENST00000524568 ABCC9O60706 1549 aa43.24■■■■■ 4.51
NDUFS3-202ENST00000524568 RB1CC1Q8TDY2 1594 aa41.23■■■■■ 4.19
NDUFS3-202ENST00000524568 NACADO15069 1562 aa41.02■■■■■ 4.16
NDUFS3-202ENST00000524568 DCAF8L2P0C7V8 631 aa40.85■■■■■ 4.13
NDUFS3-202ENST00000524568 UNC13AQ9UPW8 1703 aa40.55■■■■■ 4.08
NDUFS3-202ENST00000524568 MYO15BQ96JP2 1530 aa40.52■■■■■ 4.08
NDUFS3-202ENST00000524568 ZCCHC6Q5VYS8 1495 aaKnown RBP40.45■■■■■ 4.07
NDUFS3-202ENST00000524568 PABPN1Q86U42 306 aaKnown RBP eCLIP40.28■■■■■ 4.04
NDUFS3-202ENST00000524568 DNAJC5BQ9UF47 199 aa40.27■■■■■ 4.04
NDUFS3-202ENST00000524568 DCAF1Q9Y4B6 1507 aa40.17■■■■■ 4.02
NDUFS3-202ENST00000524568 BICRAQ9NZM4 1560 aa40.16■■■■■ 4.02
NDUFS3-202ENST00000524568 SCRIBQ14160 1630 aa39.8■■■■□ 3.96
NDUFS3-202ENST00000524568 SHROOM4Q9ULL8 1493 aa39.43■■■■□ 3.9
NDUFS3-202ENST00000524568 CC2D2AQ9P2K1 1620 aa39.1■■■■□ 3.85
NDUFS3-202ENST00000524568 EIF4G1Q04637 1599 aaKnown RBP39.08■■■■□ 3.85
NDUFS3-202ENST00000524568 CECR2Q9BXF3 1484 aa38.86■■■■□ 3.81
NDUFS3-202ENST00000524568 SMARCA4P51532 1647 aa37.96■■■■□ 3.67
NDUFS3-202ENST00000524568 NCAPD3P42695 1498 aa37.85■■■■□ 3.65
NDUFS3-202ENST00000524568 ATAD2BQ9ULI0 1458 aa37.84■■■■□ 3.65
NDUFS3-202ENST00000524568 BAZ1AQ9NRL2 1556 aaPredicted RBP37.73■■■■□ 3.63
NDUFS3-202ENST00000524568 SMARCA2P51531 1590 aa37.72■■■■□ 3.63
NDUFS3-202ENST00000524568 HMGXB3Q12766 1538 aa37.65■■■■□ 3.62
NDUFS3-202ENST00000524568 MROH2BQ7Z745 1585 aa37.59■■■■□ 3.61
NDUFS3-202ENST00000524568 PEG3Q9GZU2 1588 aa37.54■■■■□ 3.6
NDUFS3-202ENST00000524568 BAZ1BQ9UIG0 1483 aaKnown RBP37.48■■■■□ 3.59
NDUFS3-202ENST00000524568 NESP48681 1621 aa37.3■■■■□ 3.56
NDUFS3-202ENST00000524568 ERCC6Q03468 1493 aa37.21■■■■□ 3.55
NDUFS3-202ENST00000524568 WIZO95785 1651 aa37.2■■■■□ 3.55
NDUFS3-202ENST00000524568 CUX2O14529 1486 aa37.01■■■■□ 3.51
NDUFS3-202ENST00000524568 LAMC3Q9Y6N6 1575 aa36.97■■■■□ 3.51
NDUFS3-202ENST00000524568 KIF21AQ7Z4S6 1674 aa36.88■■■■□ 3.49
NDUFS3-202ENST00000524568 RSF1Q96T23 1441 aaPredicted RBP36.87■■■■□ 3.49
NDUFS3-202ENST00000524568 THOC2Q8NI27 1593 aaKnown RBP36.85■■■■□ 3.49
NDUFS3-202ENST00000524568 CADPSQ9ULU8 1353 aa36.71■■■■□ 3.47
NDUFS3-202ENST00000524568 PDS5BQ9NTI5 1447 aa36.67■■■■□ 3.46
NDUFS3-202ENST00000524568 TOP2AP11388 1531 aaKnown RBP36.66■■■■□ 3.46
NDUFS3-202ENST00000524568 DNAJC5Q9H3Z4 198 aa36.57■■■■□ 3.44
NDUFS3-202ENST00000524568 MRC2Q9UBG0 1479 aa36.42■■■■□ 3.42
NDUFS3-202ENST00000524568 CFTRP13569 1480 aa36.4■■■■□ 3.42
NDUFS3-202ENST00000524568 WDR62O43379 1518 aa36.36■■■■□ 3.41
NDUFS3-202ENST00000524568 FANCD2Q9BXW9 1451 aa36.35■■■■□ 3.41
NDUFS3-202ENST00000524568 CEP164Q9UPV0 1460 aa36.34■■■■□ 3.41
NDUFS3-202ENST00000524568 CCDC88BA6NC98 1476 aa36.24■■■■□ 3.39
NDUFS3-202ENST00000524568 PRDM2Q13029 1718 aa36.22■■■■□ 3.39
NDUFS3-202ENST00000524568 URB2Q14146 1524 aaKnown RBP36.1■■■■□ 3.37
NDUFS3-202ENST00000524568 TOPBP1Q92547 1522 aa35.73■■■■□ 3.31
NDUFS3-202ENST00000524568 DNMBPQ6XZF7 1577 aa35.63■■■■□ 3.29
NDUFS3-202ENST00000524568 ZNF608Q9ULD9 1512 aaPredicted RBP35.61■■■■□ 3.29
NDUFS3-202ENST00000524568 IFT140Q96RY7 1462 aa35.57■■■■□ 3.28
NDUFS3-202ENST00000524568 ABCC8Q09428 1581 aa35.52■■■■□ 3.28
NDUFS3-202ENST00000524568 SUPT5HO00267 1087 aaKnown RBP35.47■■■■□ 3.27
NDUFS3-202ENST00000524568 TARBP1Q13395 1621 aaKnown RBP35.44■■■■□ 3.26
NDUFS3-202ENST00000524568 EIF4G3O43432 1585 aaKnown RBP35.43■■■■□ 3.26
NDUFS3-202ENST00000524568 POLA1P09884 1462 aaPredicted RBP35.39■■■■□ 3.26
NDUFS3-202ENST00000524568 OSCARQ8IYS5 282 aa35.31■■■■□ 3.24
NDUFS3-202ENST00000524568 CUX1P39880 1505 aa35.29■■■■□ 3.24
NDUFS3-202ENST00000524568 RAD54L2Q9Y4B4 1467 aa35.29■■■■□ 3.24
NDUFS3-202ENST00000524568 AQRO60306 1485 aaKnown RBP eCLIP35.28■■■■□ 3.245e-6■■□□□ 14.3
NDUFS3-202ENST00000524568 FGD5Q6ZNL6 1462 aa35.22■■■■□ 3.23
NDUFS3-202ENST00000524568 TRIM41Q8WV44 630 aa35.17■■■■□ 3.22
NDUFS3-202ENST00000524568 SOGA1O94964 1423 aa35.16■■■■□ 3.22
NDUFS3-202ENST00000524568 CHD1O14646 1710 aa35.16■■■■□ 3.22
NDUFS3-202ENST00000524568 TDRD9Q8NDG6 1382 aaKnown RBP35.1■■■■□ 3.21
NDUFS3-202ENST00000524568 WDR97A6NE52 1622 aa35.06■■■■□ 3.2
NDUFS3-202ENST00000524568 RIMBP3CA6NJZ7 1639 aa35.02■■■■□ 3.2
NDUFS3-202ENST00000524568 RIMBP3BA6NNM3 1639 aa35.02■■■■□ 3.2
NDUFS3-202ENST00000524568 RIMBP3Q9UFD9 1639 aa35.02■■■■□ 3.2
NDUFS3-202ENST00000524568 SNAPC4Q5SXM2 1469 aa34.94■■■■□ 3.18
NDUFS3-202ENST00000524568 ARHGEF11O15085 1522 aa34.9■■■■□ 3.18
NDUFS3-202ENST00000524568 FBLN2P98095 1184 aa34.88■■■■□ 3.17
NDUFS3-202ENST00000524568 PBRM1Q86U86 1689 aa34.87■■■■□ 3.17
NDUFS3-202ENST00000524568 SYNJ1O43426 1573 aa34.83■■■■□ 3.17
NDUFS3-202ENST00000524568 BIVM-ERCC5R4GMW8 1640 aa34.82■■■■□ 3.16
NDUFS3-202ENST00000524568 GRIN2BQ13224 1484 aa34.82■■■■□ 3.16
NDUFS3-202ENST00000524568 ABCA5Q8WWZ7 1642 aa34.81■■■■□ 3.16
NDUFS3-202ENST00000524568 ABCA10Q8WWZ4 1543 aa34.81■■■■□ 3.16
NDUFS3-202ENST00000524568 MAGI1Q96QZ7 1491 aaPredicted RBP34.78■■■■□ 3.16
NDUFS3-202ENST00000524568 TOP2BQ02880 1626 aa34.78■■■■□ 3.16
NDUFS3-202ENST00000524568 GAPVD1Q14C86 1478 aa34.77■■■■□ 3.16
NDUFS3-202ENST00000524568 WRNQ14191 1432 aaPredicted RBP eCLIP34.74■■■■□ 3.15
NDUFS3-202ENST00000524568 CLASP1Q7Z460 1538 aa34.69■■■■□ 3.14
NDUFS3-202ENST00000524568 SYNJ2O15056 1496 aa34.68■■■■□ 3.14
NDUFS3-202ENST00000524568 CHMP7Q8WUX9 453 aaPredicted RBP34.64■■■■□ 3.14
NDUFS3-202ENST00000524568 ARAP1Q96P48 1450 aa34.6■■■■□ 3.13
NDUFS3-202ENST00000524568 CYB5RLQ6IPT4 315 aa34.53■■■■□ 3.12
NDUFS3-202ENST00000524568 ADAMTS12P58397 1594 aa34.51■■■■□ 3.12
NDUFS3-202ENST00000524568 GRIN2AQ12879 1464 aa34.42■■■■□ 3.1
NDUFS3-202ENST00000524568 CEP170Q5SW79 1584 aa34.36■■■■□ 3.09
NDUFS3-202ENST00000524568 ERICH3Q5RHP9 1530 aa34.35■■■■□ 3.09
NDUFS3-202ENST00000524568 FHAD1B1AJZ9 1412 aa34.3■■■■□ 3.08
NDUFS3-202ENST00000524568 NUP160Q12769 1436 aa34.29■■■■□ 3.08
NDUFS3-202ENST00000524568 ERCC6L2Q5T890 1561 aa34.27■■■■□ 3.08
NDUFS3-202ENST00000524568 SHROOM2Q13796 1616 aa34.16■■■■□ 3.06
NDUFS3-202ENST00000524568 RUSC2Q8N2Y8 1516 aa34.04■■■■□ 3.04
NDUFS3-202ENST00000524568 KIF27Q86VH2 1401 aa34.01■■■■□ 3.03
NDUFS3-202ENST00000524568 IGF1RP08069 1367 aa33.99■■■■□ 3.03
NDUFS3-202ENST00000524568 TRHP20396 242 aaPredicted RBP33.99■■■■□ 3.03
NDUFS3-202ENST00000524568 CUL7Q14999 1698 aa33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 537.9 ms