RNA–Protein interactions for RNA: ENST00000524562.1

NLRX1-213, Transcript of NLR family member X1, humanhuman

TSL 1 (best)

Gene NLRX1, Length 1,671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRX1-213ENST00000524562 NISCHQ9Y2I1 1504 aa34.67■■■■□ 3.14
NLRX1-213ENST00000524562 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
NLRX1-213ENST00000524562 ABCC9O60706 1549 aa30.28■■■□□ 2.44
NLRX1-213ENST00000524562 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
NLRX1-213ENST00000524562 NACADO15069 1562 aa29■■■□□ 2.23
NLRX1-213ENST00000524562 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
NLRX1-213ENST00000524562 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.21
NLRX1-213ENST00000524562 MYO15BQ96JP2 1530 aa28.8■■■□□ 2.2
NLRX1-213ENST00000524562 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
NLRX1-213ENST00000524562 UNC13AQ9UPW8 1703 aa28.47■■■□□ 2.15
NLRX1-213ENST00000524562 PABPN1Q86U42 306 aaKnown RBP eCLIP28.28■■■□□ 2.12
NLRX1-213ENST00000524562 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
NLRX1-213ENST00000524562 SCRIBQ14160 1630 aa28.18■■■□□ 2.1
NLRX1-213ENST00000524562 DNAJC5BQ9UF47 199 aa27.88■■■□□ 2.05
NLRX1-213ENST00000524562 SHROOM4Q9ULL8 1493 aa27.86■■■□□ 2.05
NLRX1-213ENST00000524562 EIF4G1Q04637 1599 aaKnown RBP27.48■■□□□ 1.99
NLRX1-213ENST00000524562 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.98
NLRX1-213ENST00000524562 CECR2Q9BXF3 1484 aa27.2■■□□□ 1.94
NLRX1-213ENST00000524562 SMARCA4P51532 1647 aa26.93■■□□□ 1.9
NLRX1-213ENST00000524562 BAZ1AQ9NRL2 1556 aaPredicted RBP26.87■■□□□ 1.89
NLRX1-213ENST00000524562 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
NLRX1-213ENST00000524562 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
NLRX1-213ENST00000524562 MROH2BQ7Z745 1585 aa26.74■■□□□ 1.87
NLRX1-213ENST00000524562 SMARCA2P51531 1590 aa26.73■■□□□ 1.87
NLRX1-213ENST00000524562 PEG3Q9GZU2 1588 aa26.66■■□□□ 1.86
NLRX1-213ENST00000524562 HMGXB3Q12766 1538 aa26.64■■□□□ 1.86
NLRX1-213ENST00000524562 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
NLRX1-213ENST00000524562 WIZO95785 1651 aa26.46■■□□□ 1.83
NLRX1-213ENST00000524562 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.82
NLRX1-213ENST00000524562 NESP48681 1621 aa26.2■■□□□ 1.78
NLRX1-213ENST00000524562 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.78
NLRX1-213ENST00000524562 LAMC3Q9Y6N6 1575 aa26.08■■□□□ 1.77
NLRX1-213ENST00000524562 ERCC6Q03468 1493 aa26.08■■□□□ 1.76
NLRX1-213ENST00000524562 SUPT5HO00267 1087 aaKnown RBP26.05■■□□□ 1.76
NLRX1-213ENST00000524562 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
NLRX1-213ENST00000524562 KIF21AQ7Z4S6 1674 aa25.89■■□□□ 1.73
NLRX1-213ENST00000524562 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
NLRX1-213ENST00000524562 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
NLRX1-213ENST00000524562 CFTRP13569 1480 aa25.83■■□□□ 1.73
NLRX1-213ENST00000524562 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
NLRX1-213ENST00000524562 CUX2O14529 1486 aa25.81■■□□□ 1.72
NLRX1-213ENST00000524562 FANCD2Q9BXW9 1451 aa25.7■■□□□ 1.7
NLRX1-213ENST00000524562 CEP164Q9UPV0 1460 aa25.67■■□□□ 1.7
NLRX1-213ENST00000524562 MRC2Q9UBG0 1479 aa25.64■■□□□ 1.7
NLRX1-213ENST00000524562 PRDM2Q13029 1718 aa25.63■■□□□ 1.69
NLRX1-213ENST00000524562 WDR62O43379 1518 aa25.59■■□□□ 1.69
NLRX1-213ENST00000524562 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
NLRX1-213ENST00000524562 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
NLRX1-213ENST00000524562 TOPBP1Q92547 1522 aa25.29■■□□□ 1.64
NLRX1-213ENST00000524562 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
NLRX1-213ENST00000524562 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
NLRX1-213ENST00000524562 IFT140Q96RY7 1462 aa25.12■■□□□ 1.61
NLRX1-213ENST00000524562 DNAJC5Q9H3Z4 198 aa25.11■■□□□ 1.61
NLRX1-213ENST00000524562 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
NLRX1-213ENST00000524562 CUX1P39880 1505 aa25.09■■□□□ 1.61
NLRX1-213ENST00000524562 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
NLRX1-213ENST00000524562 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
NLRX1-213ENST00000524562 FGD5Q6ZNL6 1462 aa25.01■■□□□ 1.59
NLRX1-213ENST00000524562 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
NLRX1-213ENST00000524562 EIF4G3O43432 1585 aaKnown RBP24.96■■□□□ 1.59
NLRX1-213ENST00000524562 SOGA1O94964 1423 aa24.94■■□□□ 1.58
NLRX1-213ENST00000524562 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.58
NLRX1-213ENST00000524562 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
NLRX1-213ENST00000524562 SYNJ1O43426 1573 aa24.86■■□□□ 1.57
NLRX1-213ENST00000524562 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
NLRX1-213ENST00000524562 TDRD9Q8NDG6 1382 aaKnown RBP24.84■■□□□ 1.57
NLRX1-213ENST00000524562 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.57
NLRX1-213ENST00000524562 WDR97A6NE52 1622 aa24.83■■□□□ 1.57
NLRX1-213ENST00000524562 ABCA10Q8WWZ4 1543 aa24.75■■□□□ 1.55
NLRX1-213ENST00000524562 OSCARQ8IYS5 282 aa24.72■■□□□ 1.55
NLRX1-213ENST00000524562 ABCA5Q8WWZ7 1642 aa24.68■■□□□ 1.54
NLRX1-213ENST00000524562 SNAPC4Q5SXM2 1469 aa24.67■■□□□ 1.54
NLRX1-213ENST00000524562 GRIN2BQ13224 1484 aa24.66■■□□□ 1.54
NLRX1-213ENST00000524562 GAPVD1Q14C86 1478 aa24.66■■□□□ 1.54
NLRX1-213ENST00000524562 CHD1O14646 1710 aa24.66■■□□□ 1.54
NLRX1-213ENST00000524562 PBRM1Q86U86 1689 aa24.64■■□□□ 1.54
NLRX1-213ENST00000524562 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
NLRX1-213ENST00000524562 FBLN2P98095 1184 aa24.59■■□□□ 1.53
NLRX1-213ENST00000524562 SYNJ2O15056 1496 aa24.52■■□□□ 1.52
NLRX1-213ENST00000524562 CHMP7Q8WUX9 453 aaPredicted RBP24.5■■□□□ 1.51
NLRX1-213ENST00000524562 LOC105371045A0A1W2PR82 267 aa24.46■■□□□ 1.51
NLRX1-213ENST00000524562 ADAMTS12P58397 1594 aa24.44■■□□□ 1.5
NLRX1-213ENST00000524562 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
NLRX1-213ENST00000524562 HRCP23327 699 aa24.42■■□□□ 1.5
NLRX1-213ENST00000524562 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
NLRX1-213ENST00000524562 RIMBP3CA6NJZ7 1639 aa24.39■■□□□ 1.49
NLRX1-213ENST00000524562 RIMBP3BA6NNM3 1639 aa24.39■■□□□ 1.49
NLRX1-213ENST00000524562 RIMBP3Q9UFD9 1639 aa24.39■■□□□ 1.49
NLRX1-213ENST00000524562 CLASP1Q7Z460 1538 aa24.38■■□□□ 1.49
NLRX1-213ENST00000524562 ARHGEF11O15085 1522 aa24.37■■□□□ 1.49
NLRX1-213ENST00000524562 GRIN2AQ12879 1464 aa24.37■■□□□ 1.49
NLRX1-213ENST00000524562 FHAD1B1AJZ9 1412 aa24.36■■□□□ 1.49
NLRX1-213ENST00000524562 KIF27Q86VH2 1401 aa24.34■■□□□ 1.49
NLRX1-213ENST00000524562 PCGF6Q9BYE7 350 aa24.34■■□□□ 1.49
NLRX1-213ENST00000524562 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
NLRX1-213ENST00000524562 IGF1RP08069 1367 aa24.27■■□□□ 1.48
NLRX1-213ENST00000524562 NUP160Q12769 1436 aa24.26■■□□□ 1.47
NLRX1-213ENST00000524562 CUL7Q14999 1698 aa24.2■■□□□ 1.46
NLRX1-213ENST00000524562 ARAP1Q96P48 1450 aa24.18■■□□□ 1.46
NLRX1-213ENST00000524562 RUSC2Q8N2Y8 1516 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 368.1 ms