RNA–Protein interactions for RNA: ENST00000524554.5

CAPN11-202, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-202ENST00000524554 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.42
CAPN11-202ENST00000524554 ABCC9O60706 1549 aa21.48■■□□□ 1.03
CAPN11-202ENST00000524554 CCDC180Q9P1Z9 1646 aa21.23■□□□□ 0.99
CAPN11-202ENST00000524554 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
CAPN11-202ENST00000524554 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
CAPN11-202ENST00000524554 RB1CC1Q8TDY2 1594 aa20.31■□□□□ 0.84
CAPN11-202ENST00000524554 NACADO15069 1562 aa20.2■□□□□ 0.82
CAPN11-202ENST00000524554 PABPN1Q86U42 306 aaKnown RBP eCLIP20.13■□□□□ 0.81
CAPN11-202ENST00000524554 MYO15BQ96JP2 1530 aa19.94■□□□□ 0.78
CAPN11-202ENST00000524554 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
CAPN11-202ENST00000524554 ZCCHC6Q5VYS8 1495 aaKnown RBP19.76■□□□□ 0.75
CAPN11-202ENST00000524554 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
CAPN11-202ENST00000524554 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
CAPN11-202ENST00000524554 SCRIBQ14160 1630 aa19.46■□□□□ 0.71
CAPN11-202ENST00000524554 SHROOM4Q9ULL8 1493 aa19.43■□□□□ 0.7
CAPN11-202ENST00000524554 CECR2Q9BXF3 1484 aa19.33■□□□□ 0.69
CAPN11-202ENST00000524554 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
CAPN11-202ENST00000524554 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
CAPN11-202ENST00000524554 NCAPD3P42695 1498 aa18.77■□□□□ 0.6
CAPN11-202ENST00000524554 ATAD2BQ9ULI0 1458 aa18.7■□□□□ 0.58
CAPN11-202ENST00000524554 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
CAPN11-202ENST00000524554 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
CAPN11-202ENST00000524554 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
CAPN11-202ENST00000524554 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
CAPN11-202ENST00000524554 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
CAPN11-202ENST00000524554 BAZ1AQ9NRL2 1556 aaPredicted RBP18.48■□□□□ 0.55
CAPN11-202ENST00000524554 NESP48681 1621 aa18.46■□□□□ 0.55
CAPN11-202ENST00000524554 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
CAPN11-202ENST00000524554 CUX2O14529 1486 aa18.44■□□□□ 0.54
CAPN11-202ENST00000524554 MROH2BQ7Z745 1585 aa18.43■□□□□ 0.54
CAPN11-202ENST00000524554 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
CAPN11-202ENST00000524554 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
CAPN11-202ENST00000524554 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
CAPN11-202ENST00000524554 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
CAPN11-202ENST00000524554 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
CAPN11-202ENST00000524554 WIZO95785 1651 aa18.12■□□□□ 0.49
CAPN11-202ENST00000524554 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
CAPN11-202ENST00000524554 KIF21AQ7Z4S6 1674 aa18.02■□□□□ 0.48
CAPN11-202ENST00000524554 MRC2Q9UBG0 1479 aa18■□□□□ 0.47
CAPN11-202ENST00000524554 CFTRP13569 1480 aa17.97■□□□□ 0.47
CAPN11-202ENST00000524554 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
CAPN11-202ENST00000524554 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
CAPN11-202ENST00000524554 WDR62O43379 1518 aa17.92■□□□□ 0.46
CAPN11-202ENST00000524554 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.46
CAPN11-202ENST00000524554 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
CAPN11-202ENST00000524554 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
CAPN11-202ENST00000524554 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
CAPN11-202ENST00000524554 OSCARQ8IYS5 282 aa17.77■□□□□ 0.43
CAPN11-202ENST00000524554 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
CAPN11-202ENST00000524554 TOPBP1Q92547 1522 aa17.59■□□□□ 0.41
CAPN11-202ENST00000524554 IFT140Q96RY7 1462 aa17.59■□□□□ 0.41
CAPN11-202ENST00000524554 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
CAPN11-202ENST00000524554 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
CAPN11-202ENST00000524554 DNMBPQ6XZF7 1577 aa17.46■□□□□ 0.38
CAPN11-202ENST00000524554 PRDM2Q13029 1718 aa17.45■□□□□ 0.38
CAPN11-202ENST00000524554 POLA1P09884 1462 aaPredicted RBP17.42■□□□□ 0.38
CAPN11-202ENST00000524554 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
CAPN11-202ENST00000524554 FBLN2P98095 1184 aa17.42■□□□□ 0.38
CAPN11-202ENST00000524554 SOGA1O94964 1423 aa17.41■□□□□ 0.38
CAPN11-202ENST00000524554 TDRD9Q8NDG6 1382 aaKnown RBP17.41■□□□□ 0.38
CAPN11-202ENST00000524554 TARBP1Q13395 1621 aaKnown RBP17.38■□□□□ 0.37
CAPN11-202ENST00000524554 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
CAPN11-202ENST00000524554 CYB5RLQ6IPT4 315 aa17.37■□□□□ 0.37
CAPN11-202ENST00000524554 EIF4G3O43432 1585 aaKnown RBP17.36■□□□□ 0.37
CAPN11-202ENST00000524554 RIMBP3CA6NJZ7 1639 aa17.33■□□□□ 0.37
CAPN11-202ENST00000524554 RIMBP3BA6NNM3 1639 aa17.33■□□□□ 0.37
CAPN11-202ENST00000524554 RIMBP3Q9UFD9 1639 aa17.33■□□□□ 0.37
CAPN11-202ENST00000524554 ARHGEF11O15085 1522 aa17.33■□□□□ 0.36
CAPN11-202ENST00000524554 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
CAPN11-202ENST00000524554 CUX1P39880 1505 aa17.29■□□□□ 0.36
CAPN11-202ENST00000524554 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
CAPN11-202ENST00000524554 SNAPC4Q5SXM2 1469 aa17.23■□□□□ 0.35
CAPN11-202ENST00000524554 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
CAPN11-202ENST00000524554 ARAP1Q96P48 1450 aa17.19■□□□□ 0.34
CAPN11-202ENST00000524554 CHD1O14646 1710 aa17.17■□□□□ 0.34
CAPN11-202ENST00000524554 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
CAPN11-202ENST00000524554 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
CAPN11-202ENST00000524554 GAPVD1Q14C86 1478 aa17.14■□□□□ 0.33
CAPN11-202ENST00000524554 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
CAPN11-202ENST00000524554 WDR97A6NE52 1622 aa17.11■□□□□ 0.33
CAPN11-202ENST00000524554 ABCA10Q8WWZ4 1543 aa17.1■□□□□ 0.33
CAPN11-202ENST00000524554 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
CAPN11-202ENST00000524554 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.32
CAPN11-202ENST00000524554 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
CAPN11-202ENST00000524554 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
CAPN11-202ENST00000524554 GRIN2AQ12879 1464 aa16.95■□□□□ 0.3
CAPN11-202ENST00000524554 TOP2BQ02880 1626 aa16.94■□□□□ 0.3
CAPN11-202ENST00000524554 FHAD1B1AJZ9 1412 aa16.94■□□□□ 0.3
CAPN11-202ENST00000524554 NUP160Q12769 1436 aa16.93■□□□□ 0.3
CAPN11-202ENST00000524554 PBRM1Q86U86 1689 aa16.92■□□□□ 0.3
CAPN11-202ENST00000524554 JPH4Q96JJ6 628 aa16.89■□□□□ 0.29
CAPN11-202ENST00000524554 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
CAPN11-202ENST00000524554 BIVM-ERCC5R4GMW8 1640 aa16.89■□□□□ 0.29
CAPN11-202ENST00000524554 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
CAPN11-202ENST00000524554 ADAMTS12P58397 1594 aa16.86■□□□□ 0.29
CAPN11-202ENST00000524554 ERICH3Q5RHP9 1530 aa16.85■□□□□ 0.29
CAPN11-202ENST00000524554 IGF1RP08069 1367 aa16.82■□□□□ 0.28
CAPN11-202ENST00000524554 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
CAPN11-202ENST00000524554 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
CAPN11-202ENST00000524554 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms