RNA–Protein interactions for RNA: ENST00000524528.1

FGFR1-225, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-225ENST00000524528 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.69
FGFR1-225ENST00000524528 ABCC9O60706 1549 aa23.18■■□□□ 1.3
FGFR1-225ENST00000524528 CCDC180Q9P1Z9 1646 aa22.8■■□□□ 1.24
FGFR1-225ENST00000524528 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
FGFR1-225ENST00000524528 RB1CC1Q8TDY2 1594 aa21.83■■□□□ 1.09
FGFR1-225ENST00000524528 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
FGFR1-225ENST00000524528 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
FGFR1-225ENST00000524528 NACADO15069 1562 aa21.68■■□□□ 1.06
FGFR1-225ENST00000524528 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
FGFR1-225ENST00000524528 BICRAQ9NZM4 1560 aa21.36■■□□□ 1.01
FGFR1-225ENST00000524528 MYO15BQ96JP2 1530 aa21.33■■□□□ 1
FGFR1-225ENST00000524528 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
FGFR1-225ENST00000524528 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
FGFR1-225ENST00000524528 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
FGFR1-225ENST00000524528 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
FGFR1-225ENST00000524528 CECR2Q9BXF3 1484 aa20.84■□□□□ 0.93
FGFR1-225ENST00000524528 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
FGFR1-225ENST00000524528 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
FGFR1-225ENST00000524528 DNAJC5Q9H3Z4 198 aa20.23■□□□□ 0.83
FGFR1-225ENST00000524528 NCAPD3P42695 1498 aa20.12■□□□□ 0.81
FGFR1-225ENST00000524528 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
FGFR1-225ENST00000524528 NESP48681 1621 aa19.92■□□□□ 0.78
FGFR1-225ENST00000524528 SMARCA4P51532 1647 aa19.91■□□□□ 0.78
FGFR1-225ENST00000524528 ERCC6Q03468 1493 aa19.89■□□□□ 0.77
FGFR1-225ENST00000524528 CUX2O14529 1486 aa19.88■□□□□ 0.77
FGFR1-225ENST00000524528 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
FGFR1-225ENST00000524528 HMGXB3Q12766 1538 aa19.83■□□□□ 0.77
FGFR1-225ENST00000524528 MROH2BQ7Z745 1585 aa19.78■□□□□ 0.76
FGFR1-225ENST00000524528 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.76
FGFR1-225ENST00000524528 BAZ1BQ9UIG0 1483 aaKnown RBP19.76■□□□□ 0.75
FGFR1-225ENST00000524528 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
FGFR1-225ENST00000524528 THOC2Q8NI27 1593 aaKnown RBP19.58■□□□□ 0.73
FGFR1-225ENST00000524528 LAMC3Q9Y6N6 1575 aa19.56■□□□□ 0.72
FGFR1-225ENST00000524528 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.72
FGFR1-225ENST00000524528 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
FGFR1-225ENST00000524528 KIF21AQ7Z4S6 1674 aa19.49■□□□□ 0.71
FGFR1-225ENST00000524528 WIZO95785 1651 aa19.48■□□□□ 0.71
FGFR1-225ENST00000524528 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
FGFR1-225ENST00000524528 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
FGFR1-225ENST00000524528 WDR62O43379 1518 aa19.29■□□□□ 0.68
FGFR1-225ENST00000524528 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
FGFR1-225ENST00000524528 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
FGFR1-225ENST00000524528 CFTRP13569 1480 aa19.25■□□□□ 0.67
FGFR1-225ENST00000524528 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
FGFR1-225ENST00000524528 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
FGFR1-225ENST00000524528 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
FGFR1-225ENST00000524528 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
FGFR1-225ENST00000524528 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
FGFR1-225ENST00000524528 ZNF608Q9ULD9 1512 aaPredicted RBP18.98■□□□□ 0.63
FGFR1-225ENST00000524528 TOPBP1Q92547 1522 aa18.89■□□□□ 0.61
FGFR1-225ENST00000524528 IFT140Q96RY7 1462 aa18.86■□□□□ 0.61
FGFR1-225ENST00000524528 PRDM2Q13029 1718 aa18.81■□□□□ 0.6
FGFR1-225ENST00000524528 AQRO60306 1485 aaKnown RBP eCLIP18.8■□□□□ 0.6
FGFR1-225ENST00000524528 RIMBP3CA6NJZ7 1639 aa18.78■□□□□ 0.6
FGFR1-225ENST00000524528 RIMBP3BA6NNM3 1639 aa18.78■□□□□ 0.6
FGFR1-225ENST00000524528 RIMBP3Q9UFD9 1639 aa18.78■□□□□ 0.6
FGFR1-225ENST00000524528 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
FGFR1-225ENST00000524528 CYB5RLQ6IPT4 315 aa18.73■□□□□ 0.59
FGFR1-225ENST00000524528 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
FGFR1-225ENST00000524528 ARHGEF11O15085 1522 aa18.72■□□□□ 0.59
FGFR1-225ENST00000524528 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
FGFR1-225ENST00000524528 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
FGFR1-225ENST00000524528 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
FGFR1-225ENST00000524528 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
FGFR1-225ENST00000524528 FBLN2P98095 1184 aa18.69■□□□□ 0.58
FGFR1-225ENST00000524528 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
FGFR1-225ENST00000524528 SOGA1O94964 1423 aa18.64■□□□□ 0.57
FGFR1-225ENST00000524528 CHD1O14646 1710 aa18.58■□□□□ 0.57
FGFR1-225ENST00000524528 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
FGFR1-225ENST00000524528 CUX1P39880 1505 aa18.55■□□□□ 0.56
FGFR1-225ENST00000524528 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
FGFR1-225ENST00000524528 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
FGFR1-225ENST00000524528 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
FGFR1-225ENST00000524528 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
FGFR1-225ENST00000524528 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
FGFR1-225ENST00000524528 GRIN2BQ13224 1484 aa18.42■□□□□ 0.54
FGFR1-225ENST00000524528 CLASP1Q7Z460 1538 aa18.42■□□□□ 0.54
FGFR1-225ENST00000524528 MAGI1Q96QZ7 1491 aaPredicted RBP18.38■□□□□ 0.53
FGFR1-225ENST00000524528 SYNJ2O15056 1496 aa18.36■□□□□ 0.53
FGFR1-225ENST00000524528 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
FGFR1-225ENST00000524528 WDR97A6NE52 1622 aa18.33■□□□□ 0.52
FGFR1-225ENST00000524528 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
FGFR1-225ENST00000524528 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
FGFR1-225ENST00000524528 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
FGFR1-225ENST00000524528 ERCC6L2Q5T890 1561 aa18.25■□□□□ 0.51
FGFR1-225ENST00000524528 PBRM1Q86U86 1689 aa18.24■□□□□ 0.51
FGFR1-225ENST00000524528 WRNQ14191 1432 aaPredicted RBP eCLIP18.21■□□□□ 0.51
FGFR1-225ENST00000524528 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
FGFR1-225ENST00000524528 NUP160Q12769 1436 aa18.16■□□□□ 0.5
FGFR1-225ENST00000524528 CEP170Q5SW79 1584 aa18.15■□□□□ 0.5
FGFR1-225ENST00000524528 TOP2BQ02880 1626 aa18.12■□□□□ 0.49
FGFR1-225ENST00000524528 FHAD1B1AJZ9 1412 aa18.11■□□□□ 0.49
FGFR1-225ENST00000524528 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
FGFR1-225ENST00000524528 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
FGFR1-225ENST00000524528 JPH4Q96JJ6 628 aa18.08■□□□□ 0.48
FGFR1-225ENST00000524528 SHROOM2Q13796 1616 aa18.03■□□□□ 0.48
FGFR1-225ENST00000524528 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
FGFR1-225ENST00000524528 PRG4Q92954 1404 aaPredicted RBP18.02■□□□□ 0.48
FGFR1-225ENST00000524528 IGF1RP08069 1367 aa17.96■□□□□ 0.47
FGFR1-225ENST00000524528 AEBP2Q6ZN18 517 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms