RNA–Protein interactions for RNA: ENST00000524520.5

SOX6-203, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-203ENST00000524520 NISCHQ9Y2I1 1504 aa35.13■■■■□ 3.21
SOX6-203ENST00000524520 CCDC180Q9P1Z9 1646 aa31.51■■■□□ 2.63
SOX6-203ENST00000524520 ABCC9O60706 1549 aa31.25■■■□□ 2.59
SOX6-203ENST00000524520 RB1CC1Q8TDY2 1594 aa29.92■■■□□ 2.38
SOX6-203ENST00000524520 NACADO15069 1562 aa29.77■■■□□ 2.36
SOX6-203ENST00000524520 DCAF8L2P0C7V8 631 aa29.58■■■□□ 2.33
SOX6-203ENST00000524520 MYO15BQ96JP2 1530 aa29.47■■■□□ 2.31
SOX6-203ENST00000524520 DNAJC5BQ9UF47 199 aa29.19■■■□□ 2.26
SOX6-203ENST00000524520 UNC13AQ9UPW8 1703 aa29.18■■■□□ 2.26
SOX6-203ENST00000524520 PABPN1Q86U42 306 aaKnown RBP eCLIP29.12■■■□□ 2.25
SOX6-203ENST00000524520 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
SOX6-203ENST00000524520 DCAF1Q9Y4B6 1507 aa29.11■■■□□ 2.25
SOX6-203ENST00000524520 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
SOX6-203ENST00000524520 SHROOM4Q9ULL8 1493 aa28.73■■■□□ 2.19
SOX6-203ENST00000524520 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
SOX6-203ENST00000524520 CC2D2AQ9P2K1 1620 aa28.28■■■□□ 2.12
SOX6-203ENST00000524520 EIF4G1Q04637 1599 aaKnown RBP28.26■■■□□ 2.11
SOX6-203ENST00000524520 CECR2Q9BXF3 1484 aa28.19■■■□□ 2.1
SOX6-203ENST00000524520 NCAPD3P42695 1498 aa27.49■■□□□ 1.99
SOX6-203ENST00000524520 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
SOX6-203ENST00000524520 SMARCA4P51532 1647 aa27.35■■□□□ 1.97
SOX6-203ENST00000524520 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
SOX6-203ENST00000524520 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
SOX6-203ENST00000524520 HMGXB3Q12766 1538 aa27.26■■□□□ 1.96
SOX6-203ENST00000524520 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
SOX6-203ENST00000524520 BAZ1BQ9UIG0 1483 aaKnown RBP27.11■■□□□ 1.93
SOX6-203ENST00000524520 ERCC6Q03468 1493 aa27.02■■□□□ 1.92
SOX6-203ENST00000524520 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
SOX6-203ENST00000524520 CUX2O14529 1486 aa26.99■■□□□ 1.91
SOX6-203ENST00000524520 NESP48681 1621 aa26.87■■□□□ 1.89
SOX6-203ENST00000524520 LAMC3Q9Y6N6 1575 aa26.84■■□□□ 1.89
SOX6-203ENST00000524520 DNAJC5Q9H3Z4 198 aa26.83■■□□□ 1.89
SOX6-203ENST00000524520 PDS5BQ9NTI5 1447 aa26.7■■□□□ 1.86
SOX6-203ENST00000524520 WIZO95785 1651 aa26.7■■□□□ 1.86
SOX6-203ENST00000524520 CADPSQ9ULU8 1353 aa26.64■■□□□ 1.86
SOX6-203ENST00000524520 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
SOX6-203ENST00000524520 KIF21AQ7Z4S6 1674 aa26.56■■□□□ 1.84
SOX6-203ENST00000524520 RSF1Q96T23 1441 aaPredicted RBP26.55■■□□□ 1.84
SOX6-203ENST00000524520 TOP2AP11388 1531 aaKnown RBP26.4■■□□□ 1.82
SOX6-203ENST00000524520 MRC2Q9UBG0 1479 aa26.38■■□□□ 1.81
SOX6-203ENST00000524520 CFTRP13569 1480 aa26.36■■□□□ 1.81
SOX6-203ENST00000524520 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
SOX6-203ENST00000524520 WDR62O43379 1518 aa26.3■■□□□ 1.8
SOX6-203ENST00000524520 FANCD2Q9BXW9 1451 aa26.29■■□□□ 1.8
SOX6-203ENST00000524520 PRDM2Q13029 1718 aa26.12■■□□□ 1.77
SOX6-203ENST00000524520 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
SOX6-203ENST00000524520 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
SOX6-203ENST00000524520 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
SOX6-203ENST00000524520 OSCARQ8IYS5 282 aa25.83■■□□□ 1.73
SOX6-203ENST00000524520 IFT140Q96RY7 1462 aa25.81■■□□□ 1.72
SOX6-203ENST00000524520 TOPBP1Q92547 1522 aa25.8■■□□□ 1.72
SOX6-203ENST00000524520 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
SOX6-203ENST00000524520 ZNF608Q9ULD9 1512 aaPredicted RBP25.65■■□□□ 1.7
SOX6-203ENST00000524520 TRIM41Q8WV44 630 aa25.6■■□□□ 1.69
SOX6-203ENST00000524520 TARBP1Q13395 1621 aaKnown RBP25.56■■□□□ 1.68
SOX6-203ENST00000524520 POLA1P09884 1462 aaPredicted RBP25.54■■□□□ 1.68
SOX6-203ENST00000524520 EIF4G3O43432 1585 aaKnown RBP25.54■■□□□ 1.68
SOX6-203ENST00000524520 SOGA1O94964 1423 aa25.48■■□□□ 1.67
SOX6-203ENST00000524520 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.67
SOX6-203ENST00000524520 SUPT5HO00267 1087 aaKnown RBP25.45■■□□□ 1.66
SOX6-203ENST00000524520 WDR97A6NE52 1622 aa25.42■■□□□ 1.66
SOX6-203ENST00000524520 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
SOX6-203ENST00000524520 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.65
SOX6-203ENST00000524520 CUX1P39880 1505 aa25.37■■□□□ 1.65
SOX6-203ENST00000524520 TDRD9Q8NDG6 1382 aaKnown RBP25.35■■□□□ 1.65
SOX6-203ENST00000524520 RIMBP3CA6NJZ7 1639 aa25.34■■□□□ 1.65
SOX6-203ENST00000524520 RIMBP3BA6NNM3 1639 aa25.34■■□□□ 1.65
SOX6-203ENST00000524520 RIMBP3Q9UFD9 1639 aa25.34■■□□□ 1.65
SOX6-203ENST00000524520 CHD1O14646 1710 aa25.34■■□□□ 1.65
SOX6-203ENST00000524520 FBLN2P98095 1184 aa25.32■■□□□ 1.64
SOX6-203ENST00000524520 ARHGEF11O15085 1522 aa25.29■■□□□ 1.64
SOX6-203ENST00000524520 GRIN2BQ13224 1484 aa25.24■■□□□ 1.63
SOX6-203ENST00000524520 MAGI1Q96QZ7 1491 aaPredicted RBP25.24■■□□□ 1.63
SOX6-203ENST00000524520 CHMP7Q8WUX9 453 aaPredicted RBP25.22■■□□□ 1.63
SOX6-203ENST00000524520 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
SOX6-203ENST00000524520 GAPVD1Q14C86 1478 aa25.16■■□□□ 1.62
SOX6-203ENST00000524520 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
SOX6-203ENST00000524520 CYB5RLQ6IPT4 315 aa25.14■■□□□ 1.62
SOX6-203ENST00000524520 SYNJ2O15056 1496 aa25.13■■□□□ 1.61
SOX6-203ENST00000524520 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
SOX6-203ENST00000524520 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
SOX6-203ENST00000524520 PBRM1Q86U86 1689 aa25.1■■□□□ 1.61
SOX6-203ENST00000524520 TOP2BQ02880 1626 aa25.06■■□□□ 1.6
SOX6-203ENST00000524520 ABCA5Q8WWZ7 1642 aa25.06■■□□□ 1.6
SOX6-203ENST00000524520 BIVM-ERCC5R4GMW8 1640 aa25.06■■□□□ 1.6
SOX6-203ENST00000524520 CLASP1Q7Z460 1538 aa25.06■■□□□ 1.6
SOX6-203ENST00000524520 ARAP1Q96P48 1450 aa25.02■■□□□ 1.6
SOX6-203ENST00000524520 GRIN2AQ12879 1464 aa24.89■■□□□ 1.57
SOX6-203ENST00000524520 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
SOX6-203ENST00000524520 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
SOX6-203ENST00000524520 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
SOX6-203ENST00000524520 TRHP20396 242 aaPredicted RBP24.82■■□□□ 1.56
SOX6-203ENST00000524520 NUP160Q12769 1436 aa24.81■■□□□ 1.56
SOX6-203ENST00000524520 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
SOX6-203ENST00000524520 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
SOX6-203ENST00000524520 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
SOX6-203ENST00000524520 JPH4Q96JJ6 628 aa24.61■■□□□ 1.53
SOX6-203ENST00000524520 ERCC6L2Q5T890 1561 aa24.6■■□□□ 1.53
SOX6-203ENST00000524520 IGF1RP08069 1367 aa24.57■■□□□ 1.52
SOX6-203ENST00000524520 PRG4Q92954 1404 aaPredicted RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms