RNA–Protein interactions for RNA: ENST00000524368.1

HOXA10-205, Transcript of homeobox A10, humanhuman

TSL 3

Gene HOXA10, Length 942 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10-205ENST00000524368 NISCHQ9Y2I1 1504 aa31.57■■■□□ 2.64
HOXA10-205ENST00000524368 CCDC180Q9P1Z9 1646 aa28.41■■■□□ 2.14
HOXA10-205ENST00000524368 ABCC9O60706 1549 aa28.28■■■□□ 2.12
HOXA10-205ENST00000524368 RB1CC1Q8TDY2 1594 aa27.01■■□□□ 1.91
HOXA10-205ENST00000524368 NACADO15069 1562 aa26.79■■□□□ 1.88
HOXA10-205ENST00000524368 DCAF8L2P0C7V8 631 aa26.73■■□□□ 1.87
HOXA10-205ENST00000524368 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.82
HOXA10-205ENST00000524368 MYO15BQ96JP2 1530 aa26.37■■□□□ 1.81
HOXA10-205ENST00000524368 DNAJC5BQ9UF47 199 aa26.3■■□□□ 1.8
HOXA10-205ENST00000524368 PABPN1Q86U42 306 aaKnown RBP eCLIP26.29■■□□□ 1.8
HOXA10-205ENST00000524368 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
HOXA10-205ENST00000524368 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
HOXA10-205ENST00000524368 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
HOXA10-205ENST00000524368 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
HOXA10-205ENST00000524368 SHROOM4Q9ULL8 1493 aa25.81■■□□□ 1.72
HOXA10-205ENST00000524368 CC2D2AQ9P2K1 1620 aa25.57■■□□□ 1.68
HOXA10-205ENST00000524368 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
HOXA10-205ENST00000524368 CECR2Q9BXF3 1484 aa25.46■■□□□ 1.67
HOXA10-205ENST00000524368 SMARCA4P51532 1647 aa24.67■■□□□ 1.54
HOXA10-205ENST00000524368 NCAPD3P42695 1498 aa24.64■■□□□ 1.54
HOXA10-205ENST00000524368 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
HOXA10-205ENST00000524368 ATAD2BQ9ULI0 1458 aa24.6■■□□□ 1.53
HOXA10-205ENST00000524368 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
HOXA10-205ENST00000524368 HMGXB3Q12766 1538 aa24.54■■□□□ 1.52
HOXA10-205ENST00000524368 ERCC6Q03468 1493 aa24.49■■□□□ 1.51
HOXA10-205ENST00000524368 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.51
HOXA10-205ENST00000524368 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
HOXA10-205ENST00000524368 CUX2O14529 1486 aa24.35■■□□□ 1.49
HOXA10-205ENST00000524368 MROH2BQ7Z745 1585 aa24.31■■□□□ 1.48
HOXA10-205ENST00000524368 NESP48681 1621 aa24.28■■□□□ 1.48
HOXA10-205ENST00000524368 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.46
HOXA10-205ENST00000524368 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
HOXA10-205ENST00000524368 WIZO95785 1651 aa24.11■■□□□ 1.45
HOXA10-205ENST00000524368 KIF21AQ7Z4S6 1674 aa24.09■■□□□ 1.45
HOXA10-205ENST00000524368 THOC2Q8NI27 1593 aaKnown RBP24.06■■□□□ 1.44
HOXA10-205ENST00000524368 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
HOXA10-205ENST00000524368 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
HOXA10-205ENST00000524368 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
HOXA10-205ENST00000524368 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
HOXA10-205ENST00000524368 TOP2AP11388 1531 aaKnown RBP23.78■■□□□ 1.4
HOXA10-205ENST00000524368 CEP164Q9UPV0 1460 aa23.75■■□□□ 1.39
HOXA10-205ENST00000524368 WDR62O43379 1518 aa23.73■■□□□ 1.39
HOXA10-205ENST00000524368 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.38
HOXA10-205ENST00000524368 CFTRP13569 1480 aa23.66■■□□□ 1.38
HOXA10-205ENST00000524368 PRDM2Q13029 1718 aa23.65■■□□□ 1.38
HOXA10-205ENST00000524368 CCDC88BA6NC98 1476 aa23.47■■□□□ 1.35
HOXA10-205ENST00000524368 URB2Q14146 1524 aaKnown RBP23.46■■□□□ 1.35
HOXA10-205ENST00000524368 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
HOXA10-205ENST00000524368 ABCC8Q09428 1581 aa23.26■■□□□ 1.31
HOXA10-205ENST00000524368 TOPBP1Q92547 1522 aa23.25■■□□□ 1.31
HOXA10-205ENST00000524368 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
HOXA10-205ENST00000524368 OSCARQ8IYS5 282 aa23.24■■□□□ 1.31
HOXA10-205ENST00000524368 DNMBPQ6XZF7 1577 aa23.21■■□□□ 1.31
HOXA10-205ENST00000524368 ZNF608Q9ULD9 1512 aaPredicted RBP23.15■■□□□ 1.3
HOXA10-205ENST00000524368 EIF4G3O43432 1585 aaKnown RBP23.13■■□□□ 1.29
HOXA10-205ENST00000524368 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
HOXA10-205ENST00000524368 POLA1P09884 1462 aaPredicted RBP23■■□□□ 1.27
HOXA10-205ENST00000524368 CHD1O14646 1710 aa23■■□□□ 1.27
HOXA10-205ENST00000524368 RIMBP3CA6NJZ7 1639 aa22.97■■□□□ 1.27
HOXA10-205ENST00000524368 RIMBP3BA6NNM3 1639 aa22.97■■□□□ 1.27
HOXA10-205ENST00000524368 RIMBP3Q9UFD9 1639 aa22.97■■□□□ 1.27
HOXA10-205ENST00000524368 AQRO60306 1485 aaKnown RBP eCLIP22.97■■□□□ 1.27
HOXA10-205ENST00000524368 SUPT5HO00267 1087 aaKnown RBP22.92■■□□□ 1.26
HOXA10-205ENST00000524368 SOGA1O94964 1423 aa22.91■■□□□ 1.26
HOXA10-205ENST00000524368 FBLN2P98095 1184 aa22.91■■□□□ 1.26
HOXA10-205ENST00000524368 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
HOXA10-205ENST00000524368 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
HOXA10-205ENST00000524368 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
HOXA10-205ENST00000524368 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
HOXA10-205ENST00000524368 CUX1P39880 1505 aa22.85■■□□□ 1.25
HOXA10-205ENST00000524368 TDRD9Q8NDG6 1382 aaKnown RBP22.84■■□□□ 1.25
HOXA10-205ENST00000524368 SNAPC4Q5SXM2 1469 aa22.78■■□□□ 1.24
HOXA10-205ENST00000524368 PBRM1Q86U86 1689 aa22.76■■□□□ 1.23
HOXA10-205ENST00000524368 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
HOXA10-205ENST00000524368 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
HOXA10-205ENST00000524368 CHMP7Q8WUX9 453 aaPredicted RBP22.72■■□□□ 1.23
HOXA10-205ENST00000524368 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
HOXA10-205ENST00000524368 CYB5RLQ6IPT4 315 aa22.7■■□□□ 1.22
HOXA10-205ENST00000524368 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
HOXA10-205ENST00000524368 SYNJ2O15056 1496 aa22.64■■□□□ 1.21
HOXA10-205ENST00000524368 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
HOXA10-205ENST00000524368 ARAP1Q96P48 1450 aa22.61■■□□□ 1.21
HOXA10-205ENST00000524368 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
HOXA10-205ENST00000524368 ABCA5Q8WWZ7 1642 aa22.6■■□□□ 1.21
HOXA10-205ENST00000524368 BIVM-ERCC5R4GMW8 1640 aa22.58■■□□□ 1.21
HOXA10-205ENST00000524368 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
HOXA10-205ENST00000524368 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
HOXA10-205ENST00000524368 TRHP20396 242 aaPredicted RBP22.52■■□□□ 1.2
HOXA10-205ENST00000524368 ADAMTS12P58397 1594 aa22.45■■□□□ 1.18
HOXA10-205ENST00000524368 GRIN2AQ12879 1464 aa22.42■■□□□ 1.18
HOXA10-205ENST00000524368 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
HOXA10-205ENST00000524368 FHAD1B1AJZ9 1412 aa22.36■■□□□ 1.17
HOXA10-205ENST00000524368 CEP170Q5SW79 1584 aa22.34■■□□□ 1.17
HOXA10-205ENST00000524368 NUP160Q12769 1436 aa22.29■■□□□ 1.16
HOXA10-205ENST00000524368 ERCC6L2Q5T890 1561 aa22.25■■□□□ 1.15
HOXA10-205ENST00000524368 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
HOXA10-205ENST00000524368 CUL7Q14999 1698 aa22.14■■□□□ 1.13
HOXA10-205ENST00000524368 RUSC2Q8N2Y8 1516 aa22.13■■□□□ 1.13
HOXA10-205ENST00000524368 PRG4Q92954 1404 aaPredicted RBP22.13■■□□□ 1.13
HOXA10-205ENST00000524368 KIF27Q86VH2 1401 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms