RNA–Protein interactions for RNA: ENST00000524251.1

ITGB2-224, Transcript of integrin subunit beta 2, humanhuman

TSL 4

Gene ITGB2, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-224ENST00000524251 NISCHQ9Y2I1 1504 aa37.97■■■■□ 3.67
ITGB2-224ENST00000524251 CCDC180Q9P1Z9 1646 aa34.01■■■■□ 3.03
ITGB2-224ENST00000524251 ABCC9O60706 1549 aa33.7■■■□□ 2.99
ITGB2-224ENST00000524251 RB1CC1Q8TDY2 1594 aa32.22■■■□□ 2.75
ITGB2-224ENST00000524251 NACADO15069 1562 aa32.06■■■□□ 2.72
ITGB2-224ENST00000524251 DCAF8L2P0C7V8 631 aa31.96■■■□□ 2.71
ITGB2-224ENST00000524251 MYO15BQ96JP2 1530 aa31.68■■■□□ 2.66
ITGB2-224ENST00000524251 ZCCHC6Q5VYS8 1495 aaKnown RBP31.53■■■□□ 2.64
ITGB2-224ENST00000524251 UNC13AQ9UPW8 1703 aa31.53■■■□□ 2.64
ITGB2-224ENST00000524251 PABPN1Q86U42 306 aaKnown RBP eCLIP31.41■■■□□ 2.62
ITGB2-224ENST00000524251 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.61
ITGB2-224ENST00000524251 DNAJC5BQ9UF47 199 aa31.32■■■□□ 2.6
ITGB2-224ENST00000524251 BICRAQ9NZM4 1560 aa31.25■■■□□ 2.59
ITGB2-224ENST00000524251 SCRIBQ14160 1630 aa31■■■□□ 2.55
ITGB2-224ENST00000524251 SHROOM4Q9ULL8 1493 aa30.86■■■□□ 2.53
ITGB2-224ENST00000524251 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
ITGB2-224ENST00000524251 EIF4G1Q04637 1599 aaKnown RBP30.47■■■□□ 2.47
ITGB2-224ENST00000524251 CECR2Q9BXF3 1484 aa30.32■■■□□ 2.44
ITGB2-224ENST00000524251 SMARCA4P51532 1647 aa29.6■■■□□ 2.33
ITGB2-224ENST00000524251 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
ITGB2-224ENST00000524251 ATAD2BQ9ULI0 1458 aa29.52■■■□□ 2.32
ITGB2-224ENST00000524251 BAZ1AQ9NRL2 1556 aaPredicted RBP29.48■■■□□ 2.31
ITGB2-224ENST00000524251 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
ITGB2-224ENST00000524251 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
ITGB2-224ENST00000524251 PEG3Q9GZU2 1588 aa29.28■■■□□ 2.28
ITGB2-224ENST00000524251 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
ITGB2-224ENST00000524251 BAZ1BQ9UIG0 1483 aaKnown RBP29.27■■■□□ 2.28
ITGB2-224ENST00000524251 ERCC6Q03468 1493 aa29.1■■■□□ 2.25
ITGB2-224ENST00000524251 NESP48681 1621 aa29.02■■■□□ 2.24
ITGB2-224ENST00000524251 WIZO95785 1651 aa28.96■■■□□ 2.23
ITGB2-224ENST00000524251 CUX2O14529 1486 aa28.93■■■□□ 2.22
ITGB2-224ENST00000524251 LAMC3Q9Y6N6 1575 aa28.89■■■□□ 2.22
ITGB2-224ENST00000524251 RSF1Q96T23 1441 aaPredicted RBP28.75■■■□□ 2.19
ITGB2-224ENST00000524251 KIF21AQ7Z4S6 1674 aa28.71■■■□□ 2.19
ITGB2-224ENST00000524251 THOC2Q8NI27 1593 aaKnown RBP28.7■■■□□ 2.18
ITGB2-224ENST00000524251 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
ITGB2-224ENST00000524251 CADPSQ9ULU8 1353 aa28.68■■■□□ 2.18
ITGB2-224ENST00000524251 TOP2AP11388 1531 aaKnown RBP28.6■■■□□ 2.17
ITGB2-224ENST00000524251 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
ITGB2-224ENST00000524251 MRC2Q9UBG0 1479 aa28.44■■■□□ 2.14
ITGB2-224ENST00000524251 CFTRP13569 1480 aa28.41■■■□□ 2.14
ITGB2-224ENST00000524251 CEP164Q9UPV0 1460 aa28.39■■■□□ 2.13
ITGB2-224ENST00000524251 FANCD2Q9BXW9 1451 aa28.37■■■□□ 2.13
ITGB2-224ENST00000524251 WDR62O43379 1518 aa28.36■■■□□ 2.13
ITGB2-224ENST00000524251 CCDC88BA6NC98 1476 aa28.26■■■□□ 2.11
ITGB2-224ENST00000524251 PRDM2Q13029 1718 aa28.24■■■□□ 2.11
ITGB2-224ENST00000524251 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
ITGB2-224ENST00000524251 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
ITGB2-224ENST00000524251 ABCC8Q09428 1581 aa27.83■■■□□ 2.05
ITGB2-224ENST00000524251 DNMBPQ6XZF7 1577 aa27.81■■■□□ 2.04
ITGB2-224ENST00000524251 IFT140Q96RY7 1462 aa27.8■■■□□ 2.04
ITGB2-224ENST00000524251 ZNF608Q9ULD9 1512 aaPredicted RBP27.72■■■□□ 2.03
ITGB2-224ENST00000524251 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
ITGB2-224ENST00000524251 OSCARQ8IYS5 282 aa27.65■■■□□ 2.02
ITGB2-224ENST00000524251 EIF4G3O43432 1585 aaKnown RBP27.62■■■□□ 2.01
ITGB2-224ENST00000524251 TARBP1Q13395 1621 aaKnown RBP27.61■■■□□ 2.01
ITGB2-224ENST00000524251 POLA1P09884 1462 aaPredicted RBP27.6■■■□□ 2.01
ITGB2-224ENST00000524251 AQRO60306 1485 aaKnown RBP eCLIP27.51■■□□□ 1.99
ITGB2-224ENST00000524251 CUX1P39880 1505 aa27.49■■□□□ 1.99
ITGB2-224ENST00000524251 RAD54L2Q9Y4B4 1467 aa27.49■■□□□ 1.99
ITGB2-224ENST00000524251 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
ITGB2-224ENST00000524251 SOGA1O94964 1423 aa27.48■■□□□ 1.99
ITGB2-224ENST00000524251 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
ITGB2-224ENST00000524251 CHD1O14646 1710 aa27.38■■□□□ 1.97
ITGB2-224ENST00000524251 TDRD9Q8NDG6 1382 aaKnown RBP27.37■■□□□ 1.97
ITGB2-224ENST00000524251 WDR97A6NE52 1622 aa27.36■■□□□ 1.97
ITGB2-224ENST00000524251 FBLN2P98095 1184 aa27.29■■□□□ 1.96
ITGB2-224ENST00000524251 RIMBP3CA6NJZ7 1639 aa27.29■■□□□ 1.96
ITGB2-224ENST00000524251 RIMBP3BA6NNM3 1639 aa27.29■■□□□ 1.96
ITGB2-224ENST00000524251 RIMBP3Q9UFD9 1639 aa27.29■■□□□ 1.96
ITGB2-224ENST00000524251 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
ITGB2-224ENST00000524251 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
ITGB2-224ENST00000524251 GRIN2BQ13224 1484 aa27.21■■□□□ 1.95
ITGB2-224ENST00000524251 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
ITGB2-224ENST00000524251 PBRM1Q86U86 1689 aa27.18■■□□□ 1.94
ITGB2-224ENST00000524251 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
ITGB2-224ENST00000524251 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
ITGB2-224ENST00000524251 GAPVD1Q14C86 1478 aa27.15■■□□□ 1.94
ITGB2-224ENST00000524251 TOP2BQ02880 1626 aa27.14■■□□□ 1.94
ITGB2-224ENST00000524251 WRNQ14191 1432 aaPredicted RBP eCLIP27.14■■□□□ 1.93
ITGB2-224ENST00000524251 CHMP7Q8WUX9 453 aaPredicted RBP27.13■■□□□ 1.93
ITGB2-224ENST00000524251 ABCA5Q8WWZ7 1642 aa27.12■■□□□ 1.93
ITGB2-224ENST00000524251 SYNJ1O43426 1573 aa27.11■■□□□ 1.93
ITGB2-224ENST00000524251 SYNJ2O15056 1496 aa27.09■■□□□ 1.93
ITGB2-224ENST00000524251 CLASP1Q7Z460 1538 aa27.03■■□□□ 1.92
ITGB2-224ENST00000524251 CYB5RLQ6IPT4 315 aa26.99■■□□□ 1.91
ITGB2-224ENST00000524251 ARAP1Q96P48 1450 aa26.96■■□□□ 1.91
ITGB2-224ENST00000524251 ADAMTS12P58397 1594 aa26.9■■□□□ 1.9
ITGB2-224ENST00000524251 GRIN2AQ12879 1464 aa26.87■■□□□ 1.89
ITGB2-224ENST00000524251 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
ITGB2-224ENST00000524251 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
ITGB2-224ENST00000524251 CEP170Q5SW79 1584 aa26.76■■□□□ 1.87
ITGB2-224ENST00000524251 NUP160Q12769 1436 aa26.74■■□□□ 1.87
ITGB2-224ENST00000524251 ERCC6L2Q5T890 1561 aa26.63■■□□□ 1.85
ITGB2-224ENST00000524251 SHROOM2Q13796 1616 aa26.62■■□□□ 1.85
ITGB2-224ENST00000524251 TRHP20396 242 aaPredicted RBP26.62■■□□□ 1.85
ITGB2-224ENST00000524251 KIF27Q86VH2 1401 aa26.6■■□□□ 1.85
ITGB2-224ENST00000524251 CUL7Q14999 1698 aa26.54■■□□□ 1.84
ITGB2-224ENST00000524251 IGF1RP08069 1367 aa26.53■■□□□ 1.84
ITGB2-224ENST00000524251 RUSC2Q8N2Y8 1516 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms